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Moc08g43790 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g43790
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionacidic mammalian chitinase-like
Genome locationchr8:33650047..33650448
RNA-Seq ExpressionMoc08g43790
SyntenyMoc08g43790
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0008061 - chitin binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR001223 - Glycoside hydrolase family 18, catalytic domain
IPR017853 - Glycoside hydrolase superfamily
IPR029070 - Chitinase insertion domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAM18075.1 class V chitinase [Momordica charantia]1.3e-2471.08Show/hide
Query:  IEYSKVKKLIDANAGNGKNIPNDPRFGIAYTYANATWITYESESTIPEKIKLAKQNQLLGYFAWNLSGDDDVNTLYNAAKTNW
        ++YS+VK    A      NIPNDPRFGIAY Y   TWI YESESTIP KIK AKQNQLLGYFAWN+SGDDDVNTL NAA++NW
Subjt:  IEYSKVKKLIDANAGNGKNIPNDPRFGIAYTYANATWITYESESTIPEKIKLAKQNQLLGYFAWNLSGDDDVNTLYNAAKTNW

XP_022143018.1 acidic mammalian chitinase-like [Momordica charantia]1.1e-3168.27Show/hide
Query:  FRRQVGPAASGEGYVIGTGGQIEYSKVKKLIDANAGNGKNIPNDPRFGIAYTYANATWITYESESTIPEKIKLAKQNQLLGYFAWNLSGDDDVNTLYNAA
        F +  G AAS         GQ++YS+VKK IDA+A    NIPNDPRFGIAY YA  TWI YESESTIP KIK AKQNQLLGYFAWN+SGDDDVNTL NAA
Subjt:  FRRQVGPAASGEGYVIGTGGQIEYSKVKKLIDANAGNGKNIPNDPRFGIAYTYANATWITYESESTIPEKIKLAKQNQLLGYFAWNLSGDDDVNTLYNAA

Query:  KTNW
        ++NW
Subjt:  KTNW

XP_022143252.1 acidic mammalian chitinase-like [Momordica charantia]2.1e-4382.86Show/hide
Query:  FRRQVGPAASGEGYVIGTGGQIEYSKVKKLIDANAGNGKNIPNDPRFGIAYTYANATWITYESESTIPEKIKLAKQNQLLGYFAWNLSGDDDVNTLYNAA
        F +  GPAAS  GYVIGT GQ+EYS+VKK I ANA  GKNIPNDPRFGIAY YANATWI YESESTIP KI+LAKQNQLLGYFAWN+SGDDDVNTLYNAA
Subjt:  FRRQVGPAASGEGYVIGTGGQIEYSKVKKLIDANAGNGKNIPNDPRFGIAYTYANATWITYESESTIPEKIKLAKQNQLLGYFAWNLSGDDDVNTLYNAA

Query:  KTNWH
        KTNWH
Subjt:  KTNWH

XP_022143253.1 chitotriosidase-1-like [Momordica charantia]3.6e-3275.28Show/hide
Query:  IGTGGQIEYSKVKKLIDANAGNGKNIPNDPRFGIAYTYANATWITYESESTIPEKIKLAKQNQLLGYFAWNLSGDDDVNTLYNAAKTNW
        +   GQ++YS+VKK IDA+A   KNIPNDPRFGIAY YA  TWI YESESTIP KIK AKQNQLLGYFAWN+SGDDDVNTL NAA++NW
Subjt:  IGTGGQIEYSKVKKLIDANAGNGKNIPNDPRFGIAYTYANATWITYESESTIPEKIKLAKQNQLLGYFAWNLSGDDDVNTLYNAAKTNW

XP_022159350.1 chitinase-3-like protein 2 [Momordica charantia]3.8e-2151.92Show/hide
Query:  FRRQVGPAASGEGYVIGTGGQIEYSKVKKLIDANAGNGKNIPNDPRFGIAYTYANATWITYESESTIPEKIKLAKQNQLLGYFAWNLSGDDDVNTLYNAA
        F + +GP A G+ Y I   GQI+ S VK+ I  N  + + + +D R+ I+Y YA  TWI YESE TIP+KI  AK +++LGYFAWN++ DD+VNTL NAA
Subjt:  FRRQVGPAASGEGYVIGTGGQIEYSKVKKLIDANAGNGKNIPNDPRFGIAYTYANATWITYESESTIPEKIKLAKQNQLLGYFAWNLSGDDDVNTLYNAA

Query:  KTNW
        +TNW
Subjt:  KTNW

TrEMBL top hitse value%identityAlignment
A0A6J1CPP6 acidic mammalian chitinase-like5.1e-3268.27Show/hide
Query:  FRRQVGPAASGEGYVIGTGGQIEYSKVKKLIDANAGNGKNIPNDPRFGIAYTYANATWITYESESTIPEKIKLAKQNQLLGYFAWNLSGDDDVNTLYNAA
        F +  G AAS         GQ++YS+VKK IDA+A    NIPNDPRFGIAY YA  TWI YESESTIP KIK AKQNQLLGYFAWN+SGDDDVNTL NAA
Subjt:  FRRQVGPAASGEGYVIGTGGQIEYSKVKKLIDANAGNGKNIPNDPRFGIAYTYANATWITYESESTIPEKIKLAKQNQLLGYFAWNLSGDDDVNTLYNAA

Query:  KTNW
        ++NW
Subjt:  KTNW

A0A6J1CQ93 chitotriosidase-1-like1.8e-3275.28Show/hide
Query:  IGTGGQIEYSKVKKLIDANAGNGKNIPNDPRFGIAYTYANATWITYESESTIPEKIKLAKQNQLLGYFAWNLSGDDDVNTLYNAAKTNW
        +   GQ++YS+VKK IDA+A   KNIPNDPRFGIAY YA  TWI YESESTIP KIK AKQNQLLGYFAWN+SGDDDVNTL NAA++NW
Subjt:  IGTGGQIEYSKVKKLIDANAGNGKNIPNDPRFGIAYTYANATWITYESESTIPEKIKLAKQNQLLGYFAWNLSGDDDVNTLYNAAKTNW

A0A6J1CQ95 acidic mammalian chitinase-like9.9e-4482.86Show/hide
Query:  FRRQVGPAASGEGYVIGTGGQIEYSKVKKLIDANAGNGKNIPNDPRFGIAYTYANATWITYESESTIPEKIKLAKQNQLLGYFAWNLSGDDDVNTLYNAA
        F +  GPAAS  GYVIGT GQ+EYS+VKK I ANA  GKNIPNDPRFGIAY YANATWI YESESTIP KI+LAKQNQLLGYFAWN+SGDDDVNTLYNAA
Subjt:  FRRQVGPAASGEGYVIGTGGQIEYSKVKKLIDANAGNGKNIPNDPRFGIAYTYANATWITYESESTIPEKIKLAKQNQLLGYFAWNLSGDDDVNTLYNAA

Query:  KTNWH
        KTNWH
Subjt:  KTNWH

A0A6J1DYG4 chitinase-3-like protein 21.8e-2151.92Show/hide
Query:  FRRQVGPAASGEGYVIGTGGQIEYSKVKKLIDANAGNGKNIPNDPRFGIAYTYANATWITYESESTIPEKIKLAKQNQLLGYFAWNLSGDDDVNTLYNAA
        F + +GP A G+ Y I   GQI+ S VK+ I  N  + + + +D R+ I+Y YA  TWI YESE TIP+KI  AK +++LGYFAWN++ DD+VNTL NAA
Subjt:  FRRQVGPAASGEGYVIGTGGQIEYSKVKKLIDANAGNGKNIPNDPRFGIAYTYANATWITYESESTIPEKIKLAKQNQLLGYFAWNLSGDDDVNTLYNAA

Query:  KTNW
        +TNW
Subjt:  KTNW

Q8S2V9 Class V chitinase6.1e-2571.08Show/hide
Query:  IEYSKVKKLIDANAGNGKNIPNDPRFGIAYTYANATWITYESESTIPEKIKLAKQNQLLGYFAWNLSGDDDVNTLYNAAKTNW
        ++YS+VK    A      NIPNDPRFGIAY Y   TWI YESESTIP KIK AKQNQLLGYFAWN+SGDDDVNTL NAA++NW
Subjt:  IEYSKVKKLIDANAGNGKNIPNDPRFGIAYTYANATWITYESESTIPEKIKLAKQNQLLGYFAWNLSGDDDVNTLYNAAKTNW

SwissProt top hitse value%identityAlignment
A0A072VEP0 Class V chitinase CHIT5a1.2e-0634.48Show/hide
Query:  GPAASGEGYVIGTGGQIEYSKVKKLIDANAGNGKNIPNDPRFGIAYTYANATWITYESESTIPEKIKLAKQNQLLGYFAWNLSGDDD
        G  A   G    T G + Y+++ K    N  +G N+  D      Y+YA  TWI Y+   +I  K++ AK   L GYF W L  D D
Subjt:  GPAASGEGYVIGTGGQIEYSKVKKLIDANAGNGKNIPNDPRFGIAYTYANATWITYESESTIPEKIKLAKQNQLLGYFAWNLSGDDD

A0A1B1J8Z2 Class V chitinase CHIT51.4e-0528.28Show/hide
Query:  GPAASGEGYVIGTGGQIEYSKVKKLIDANAGNGKNIPNDPRFGIAYTYANATWITYESESTIPEKIKLAKQNQLLGYFAWNLSGDDDVNTLYNAAKTNW
        G  A   G  + T G ++Y ++   +  N   G  +  D      Y+Y+  TWI Y+   +I +K++ A+   L GYF W +  D D  T+   A   W
Subjt:  GPAASGEGYVIGTGGQIEYSKVKKLIDANAGNGKNIPNDPRFGIAYTYANATWITYESESTIPEKIKLAKQNQLLGYFAWNLSGDDDVNTLYNAAKTNW

O81862 Class V chitinase2.2e-0836.96Show/hide
Query:  GYVIGTGGQIEYSKVKKLIDANAGNGKNIPNDPRFGIAYTYANATWITYESESTIPEKIKLAKQNQLLGYFAWNLSGDDDVNTLYNAAKTNW
        G  I   G I Y +++K I  N      + N    G  Y YA   WI Y+   +I  K++ AKQ  LLGYF+W++ G DD + L  AA   W
Subjt:  GYVIGTGGQIEYSKVKKLIDANAGNGKNIPNDPRFGIAYTYANATWITYESESTIPEKIKLAKQNQLLGYFAWNLSGDDDVNTLYNAAKTNW

U5N4E3 Nod factor hydrolase protein 16.7e-0530.3Show/hide
Query:  GPAASGEGYVIGTGGQIEYSKVKKLIDANAGNGKNIPNDPRFGIAYTYANATWITYESESTIPEKIKLAKQNQLLGYFAWNLSGDDDVNTLYNAAKTNW
        G  A   G   G  G + Y +V   +D N   G  +  D   G  Y+Y+ +TWI Y+   T+  K+  A+  +L GYF W  +G D  +   + A   W
Subjt:  GPAASGEGYVIGTGGQIEYSKVKKLIDANAGNGKNIPNDPRFGIAYTYANATWITYESESTIPEKIKLAKQNQLLGYFAWNLSGDDDVNTLYNAAKTNW

Arabidopsis top hitse value%identityAlignment
AT4G19750.1 Glycosyl hydrolase family protein with chitinase insertion domain3.5e-0935.29Show/hide
Query:  GPAASGEGYVIGTGGQIEYSKVKKLIDANAGNGKNIPNDPRFGIAYTYANATWITYESESTIPEKIKLAKQNQLLGYFAWNLSGD
        G  A+ +G  I + G I Y+K++  I     NG    +DP     Y Y   TWI Y+   +I  K++ AK   LLGYF+W++  D
Subjt:  GPAASGEGYVIGTGGQIEYSKVKKLIDANAGNGKNIPNDPRFGIAYTYANATWITYESESTIPEKIKLAKQNQLLGYFAWNLSGD

AT4G19760.1 Glycosyl hydrolase family protein with chitinase insertion domain2.7e-0935.35Show/hide
Query:  GPAASGEGYVIGTGGQIEYSKVKKLIDANAGNGKNIPNDPRFGIAYTYANATWITYESESTIPEKIKLAKQNQLLGYFAWNLSGDDDVNTLYNAAKTNW
        G  A+ +G  I   G I Y+K++  I     NG    +DP     Y Y   TWI Y+   +I  K+K AK   LLGYF+W++  D +   L  AA   W
Subjt:  GPAASGEGYVIGTGGQIEYSKVKKLIDANAGNGKNIPNDPRFGIAYTYANATWITYESESTIPEKIKLAKQNQLLGYFAWNLSGDDDVNTLYNAAKTNW

AT4G19770.1 Glycosyl hydrolase family protein with chitinase insertion domain4.2e-1038.71Show/hide
Query:  GYVIGTGGQIEYSKVKKLIDANAGNGKNIPNDPRFGIAYTYANATWITYESESTIPEKIKLAKQNQLLGYFAWNLSGDDDVNTLYNAAKTNWH
        G  I   G+I YS++K  I     N     +D      Y YA  TWI Y+SE +I  K+  AKQ  LLGYF+W + GDD  + L +A  + +H
Subjt:  GYVIGTGGQIEYSKVKKLIDANAGNGKNIPNDPRFGIAYTYANATWITYESESTIPEKIKLAKQNQLLGYFAWNLSGDDDVNTLYNAAKTNWH

AT4G19800.1 Glycosyl hydrolase family protein with chitinase insertion domain2.2e-1138Show/hide
Query:  GPAASGEGYVIGTGGQIEYSKVKKLIDANAGNGKNIPNDPRFGIAYTYANATWITYESESTIPEKIKLAKQNQLLGYFAWNLSGDDDVNTLYNAAKTNWH
        G  A+  G  I   G+I Y +++  I     NG    +D      Y YA  TWI Y+SE +I  K+  AKQ  LLGYF+W++ GDD+ + L +A  T +H
Subjt:  GPAASGEGYVIGTGGQIEYSKVKKLIDANAGNGKNIPNDPRFGIAYTYANATWITYESESTIPEKIKLAKQNQLLGYFAWNLSGDDDVNTLYNAAKTNWH

AT4G19810.1 Glycosyl hydrolase family protein with chitinase insertion domain1.6e-0936.96Show/hide
Query:  GYVIGTGGQIEYSKVKKLIDANAGNGKNIPNDPRFGIAYTYANATWITYESESTIPEKIKLAKQNQLLGYFAWNLSGDDDVNTLYNAAKTNW
        G  I   G I Y +++K I  N      + N    G  Y YA   WI Y+   +I  K++ AKQ  LLGYF+W++ G DD + L  AA   W
Subjt:  GYVIGTGGQIEYSKVKKLIDANAGNGKNIPNDPRFGIAYTYANATWITYESESTIPEKIKLAKQNQLLGYFAWNLSGDDDVNTLYNAAKTNW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCCTGCAACCAAGATCGTGTTCGGAATCCCTTTCCACGGGTGGGCGTGGCAACTCGAAGATGCTCTCCAGCACGACGTGTTTTCGAAGGCAAGTGGGCCCAGCTGC
GTCTGGTGAAGGCTATGTGATTGGCACCGGAGGCCAAATAGAGTACTCAAAGGTGAAAAAGTTAATAGACGCCAACGCCGGTAATGGTAAAAACATCCCAAATGATCCCA
GATTTGGGATTGCCTACACCTATGCCAACGCCACCTGGATTACGTACGAAAGTGAATCCACCATCCCTGAGAAAATTAAATTGGCAAAGCAAAACCAGCTGCTGGGTTAC
TTTGCTTGGAACCTTTCTGGCGACGATGACGTCAACACTCTTTATAATGCTGCCAAAACCAATTGGCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCCTGCAACCAAGATCGTGTTCGGAATCCCTTTCCACGGGTGGGCGTGGCAACTCGAAGATGCTCTCCAGCACGACGTGTTTTCGAAGGCAAGTGGGCCCAGCTGC
GTCTGGTGAAGGCTATGTGATTGGCACCGGAGGCCAAATAGAGTACTCAAAGGTGAAAAAGTTAATAGACGCCAACGCCGGTAATGGTAAAAACATCCCAAATGATCCCA
GATTTGGGATTGCCTACACCTATGCCAACGCCACCTGGATTACGTACGAAAGTGAATCCACCATCCCTGAGAAAATTAAATTGGCAAAGCAAAACCAGCTGCTGGGTTAC
TTTGCTTGGAACCTTTCTGGCGACGATGACGTCAACACTCTTTATAATGCTGCCAAAACCAATTGGCATTGA
Protein sequenceShow/hide protein sequence
MSLQPRSCSESLSTGGRGNSKMLSSTTCFRRQVGPAASGEGYVIGTGGQIEYSKVKKLIDANAGNGKNIPNDPRFGIAYTYANATWITYESESTIPEKIKLAKQNQLLGY
FAWNLSGDDDVNTLYNAAKTNWH