; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc08g44470 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g44470
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionzinc finger Ran-binding domain-containing protein 2-like
Genome locationchr8:34165457..34166349
RNA-Seq ExpressionMoc08g44470
SyntenyMoc08g44470
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001876 - Zinc finger, RanBP2-type
IPR036443 - Zinc finger, RanBP2-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139322.1 zinc finger Ran-binding domain-containing protein 2 [Cucumis sativus]6.0e-6481.82Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDH----QALLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGD
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTY+ +   H      +LAGDWYCNCGAHNYASRS+CY+CNSNA+K++D IGALPGWKSGD
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDH----QALLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGD

Query:  WICTRIGCEMHNYASRMECYKCNTPRDFGGAV
        WIC+RIGCE HNYASRMECYKC  PR FGGAV
Subjt:  WICTRIGCEMHNYASRMECYKCNTPRDFGGAV

XP_008457786.1 PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Cucumis melo]3.2e-6583.33Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDH----QALLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGD
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TY+ +   H      +LAGDWYCNCGAHNYASRS+CYRCNSNA+K++D IGALPGWKSGD
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDH----QALLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGD

Query:  WICTRIGCEMHNYASRMECYKCNTPRDFGGAV
        WIC+RIGCE HNYASRMECYKC TPRDFGGAV
Subjt:  WICTRIGCEMHNYASRMECYKCNTPRDFGGAV

XP_022143171.1 uncharacterized RNA-binding protein C17H9.04c-like [Momordica charantia]3.5e-80100Show/hide
Query:  MTMNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQALLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGDWI
        MTMNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQALLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGDWI
Subjt:  MTMNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQALLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGDWI

Query:  CTRIGCEMHNYASRMECYKCNTPRDFGGAV
        CTRIGCEMHNYASRMECYKCNTPRDFGGAV
Subjt:  CTRIGCEMHNYASRMECYKCNTPRDFGGAV

XP_022966014.1 zinc finger Ran-binding domain-containing protein 2-like [Cucurbita maxima]3.5e-6485.94Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQALLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGDWICT
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYE++KT+   +LAGDWYC+CGAHNYASRS+CYRC  NA+K+ D IGALPGWKSGDWIC 
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQALLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGDWICT

Query:  RIGCEMHNYASRMECYKCNTPRDFGGAV
        RIGCE HNYASRMECYKC TPRDFGGAV
Subjt:  RIGCEMHNYASRMECYKCNTPRDFGGAV

XP_023538268.1 zinc finger Ran-binding domain-containing protein 2-like [Cucurbita pepo subsp. pepo]1.0e-6385.16Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQALLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGDWICT
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TYE++KT+   +LAGDWYC+CGAHNYASRS+CYRC  NA+K+ D IGALPGWKSGDWIC 
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQALLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGDWICT

Query:  RIGCEMHNYASRMECYKCNTPRDFGGAV
        RIGCE HNYASRMECYKC TPRDFGGAV
Subjt:  RIGCEMHNYASRMECYKCNTPRDFGGAV

TrEMBL top hitse value%identityAlignment
A0A0A0LIX1 Uncharacterized protein1.6e-6281.4Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDH----QALLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGD
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTY+ +   H      +LAGDWYCNCGAHNYASRS+CY+CNSNA+K++D IGALPGWKSGD
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDH----QALLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGD

Query:  WICTRIGCEMHNYASRMECYKCNTPRDFG
        WIC+RIGCE HNYASRMECYKC  PR FG
Subjt:  WICTRIGCEMHNYASRMECYKCNTPRDFG

A0A1S3C6B6 uncharacterized RNA-binding protein C17H9.04c1.5e-6583.33Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDH----QALLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGD
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TY+ +   H      +LAGDWYCNCGAHNYASRS+CYRCNSNA+K++D IGALPGWKSGD
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDH----QALLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGD

Query:  WICTRIGCEMHNYASRMECYKCNTPRDFGGAV
        WIC+RIGCE HNYASRMECYKC TPRDFGGAV
Subjt:  WICTRIGCEMHNYASRMECYKCNTPRDFGGAV

A0A6J1CPG4 uncharacterized RNA-binding protein C17H9.04c-like1.7e-80100Show/hide
Query:  MTMNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQALLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGDWI
        MTMNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQALLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGDWI
Subjt:  MTMNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQALLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGDWI

Query:  CTRIGCEMHNYASRMECYKCNTPRDFGGAV
        CTRIGCEMHNYASRMECYKCNTPRDFGGAV
Subjt:  CTRIGCEMHNYASRMECYKCNTPRDFGGAV

A0A6J1FCS1 zinc finger Ran-binding domain-containing protein 2-like2.1e-6283.59Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQALLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGDWICT
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TYE++KT+   +LAGDWYC+CGAHNYASRS+CYRC  NA+K+ D I ALPGWKSGDWIC 
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQALLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGDWICT

Query:  RIGCEMHNYASRMECYKCNTPRDFGGAV
        RIGCE HNYASRMECYKC TPR+FGGAV
Subjt:  RIGCEMHNYASRMECYKCNTPRDFGGAV

A0A6J1HSH3 zinc finger Ran-binding domain-containing protein 2-like1.7e-6485.94Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQALLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGDWICT
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYE++KT+   +LAGDWYC+CGAHNYASRS+CYRC  NA+K+ D IGALPGWKSGDWIC 
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQALLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGDWICT

Query:  RIGCEMHNYASRMECYKCNTPRDFGGAV
        RIGCE HNYASRMECYKC TPRDFGGAV
Subjt:  RIGCEMHNYASRMECYKCNTPRDFGGAV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G48570.1 zinc finger (Ran-binding) family protein1.1e-1030.17Show/hide
Query:  GDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQALLAGDWYC-NCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGDWICTRIGCEM
        GDW+C  C  +NF + ++C +C   K  GP  T+      +   +  GDW C  CG  N+AS   C  C     K +         + GDW C    C+ 
Subjt:  GDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQALLAGDWYC-NCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGDWICTRIGCEM

Query:  HNYASRMECYKCNTPR
         N+     C KC   R
Subjt:  HNYASRMECYKCNTPR

AT2G17975.1 zinc finger (Ran-binding) family protein3.6e-1425.36Show/hide
Query:  GDWMCGVCEHVNFKKREACQRCGYPK--------------------YGGPDPTTYEY------------HKTDHQALLAGDWYCNCGAHNYASRSNCYRC
        GDW+C  C + N+  RE C++CG  K                    Y    P +++               + H+   +GDW C CG HNY+SR  C +C
Subjt:  GDWMCGVCEHVNFKKREACQRCGYPK--------------------YGGPDPTTYEY------------HKTDHQALLAGDWYCNCGAHNYASRSNCYRC

Query:  NSNA--------------------------------------------------------FKNVDNIGALPG-----WKSGDWICTRIGCEMHNYASRME
        N  A                                                        F    +  AL G     W+ GDW+CT   C+ HNYASR E
Subjt:  NSNA--------------------------------------------------------FKNVDNIGALPG-----WKSGDWICTRIGCEMHNYASRME

Query:  CYKCNTPRD
        C +C T RD
Subjt:  CYKCNTPRD

AT2G26695.1 Ran BP2/NZF zinc finger-like superfamily protein1.4e-4755.32Show/hide
Query:  MNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQALLAGDWYC---NCGAHNYASRSNCYRC--------------NSNAFKNVDN
        M+W+GGDW+CG C+H NFKKRE+CQ+CGYPK+GG D +TY Y++T+   ++AGDWYC   NCG+HNYASR++CYRC                 A+ N D 
Subjt:  MNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQALLAGDWYC---NCGAHNYASRSNCYRC--------------NSNAFKNVDN

Query:  IGALPGWKSGDWICTRIGCEMHNYASRMECYKCNTPRDFGG
            PGWK+GDW+C R+GC +HNYASR EC+KC T RD+GG
Subjt:  IGALPGWKSGDWICTRIGCEMHNYASRMECYKCNTPRDFGG

AT3G15680.1 Ran BP2/NZF zinc finger-like superfamily protein3.2e-3141.14Show/hide
Query:  GDWMCGVCEHVNFKKREACQRCG-------------YPKYGGPDPTTYEYHKTDHQALLAGDWYC---NCGAHNYASRSNCYRCNSNAFKNVDNIGA---
        GDW C  C H+NF++R++CQRCG             +  +GG   + + +  T    +  GDWYC   NCG HN+ASRS C++C +  FK+    G    
Subjt:  GDWMCGVCEHVNFKKREACQRCG-------------YPKYGGPDPTTYEYHKTDHQALLAGDWYC---NCGAHNYASRSNCYRCNSNAFKNVDNIGA---

Query:  ----------------LPG------WKSGDWICTRIGCEMHNYASRMECYKCNTPRDF
                        +PG      WKSGDWICTRIGC  HN+ASRMEC++CN PRDF
Subjt:  ----------------LPG------WKSGDWICTRIGCEMHNYASRMECYKCNTPRDF

AT5G25490.1 Ran BP2/NZF zinc finger-like superfamily protein6.3e-2735.62Show/hide
Query:  GDWMCGVCEHVNFKKREACQRCGYPKYGGPD----------PTTYEYHKTDHQALLAGDWYCN---CGAHNYASRSNCYRCN-------------SNAFK
        GDW C +C H+NF++R++CQRC  P+ GG            P +  +       +  GDWYCN   CG HN+A+RS+C++C              +  F 
Subjt:  GDWMCGVCEHVNFKKREACQRCGYPKYGGPD----------PTTYEYHKTDHQALLAGDWYCN---CGAHNYASRSNCYRCN-------------SNAFK

Query:  NVDNIGALPG------------------WKSGDWICTRIGCEMHNYASRMECYKCNTPRD
        ++ N+G   G                  WKSGDWIC R GC  HN+ASR EC++CN P++
Subjt:  NVDNIGALPG------------------WKSGDWICTRIGCEMHNYASRMECYKCNTPRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGATGAACATGAACTGGTCGGGAGGCGACTGGATGTGCGGCGTGTGCGAGCACGTGAACTTCAAGAAGAGAGAAGCCTGCCAAAGATGTGGGTACCCAAAATATGG
TGGCCCTGATCCCACAACATATGAATACCATAAAACAGATCATCAAGCTCTCTTGGCTGGAGATTGGTACTGCAACTGTGGAGCTCACAACTATGCCAGCAGATCAAACT
GCTACAGATGCAATAGTAATGCGTTTAAGAATGTGGATAATATTGGTGCCTTGCCTGGATGGAAATCTGGGGATTGGATTTGCACTAGAATAGGATGCGAAATGCACAAT
TATGCGAGTAGGATGGAATGCTACAAATGCAACACTCCGAGGGATTTTGGTGGAGCTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACGATGAACATGAACTGGTCGGGAGGCGACTGGATGTGCGGCGTGTGCGAGCACGTGAACTTCAAGAAGAGAGAAGCCTGCCAAAGATGTGGGTACCCAAAATATGG
TGGCCCTGATCCCACAACATATGAATACCATAAAACAGATCATCAAGCTCTCTTGGCTGGAGATTGGTACTGCAACTGTGGAGCTCACAACTATGCCAGCAGATCAAACT
GCTACAGATGCAATAGTAATGCGTTTAAGAATGTGGATAATATTGGTGCCTTGCCTGGATGGAAATCTGGGGATTGGATTTGCACTAGAATAGGATGCGAAATGCACAAT
TATGCGAGTAGGATGGAATGCTACAAATGCAACACTCCGAGGGATTTTGGTGGAGCTGTTTGA
Protein sequenceShow/hide protein sequence
MTMNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQALLAGDWYCNCGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGDWICTRIGCEMHN
YASRMECYKCNTPRDFGGAV