; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc08g45580 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g45580
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr8:34964335..34969898
RNA-Seq ExpressionMoc08g45580
SyntenyMoc08g45580
Gene Ontology termsGO:1905786 - positive regulation of anaphase-promoting complex-dependent catabolic process (biological process)
GO:0005680 - anaphase-promoting complex (cellular component)
GO:0010997 - anaphase-promoting complex binding (molecular function)
GO:0016829 - lyase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:1990757 - ubiquitin ligase activator activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY22705.1 Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]2.6e-0958.82Show/hide
Query:  EIKKLNGRNDFRLWREEVRALSDSQGLLETLRGKEVLSDGLSDREKQPLMSNALSVTQLSLADEILIE
        EI+K NGRNDF LWR ++RAL   QGLL+ L+GKE L   LSD EK  LM  A SV  L+L+DE+L E
Subjt:  EIKKLNGRNDFRLWREEVRALSDSQGLLETLRGKEVLSDGLSDREKQPLMSNALSVTQLSLADEILIE

KAF7811757.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Senna tora]4.5e-0955.56Show/hide
Query:  AAMSEIKKLNGRNDFRLWREEVRALSDSQGLLETLRGKEVLSDGLSDREKQPLMSNALSVTQLSLADEILIE
        AA  EI+K N  NDF LWR ++RAL   QGLL+ L GKE LS  LS++EK  L+  ALS   LSLAD++L E
Subjt:  AAMSEIKKLNGRNDFRLWREEVRALSDSQGLLETLRGKEVLSDGLSDREKQPLMSNALSVTQLSLADEILIE

KAF7817786.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Senna tora]2.6e-0955.56Show/hide
Query:  AAMSEIKKLNGRNDFRLWREEVRALSDSQGLLETLRGKEVLSDGLSDREKQPLMSNALSVTQLSLADEILIE
        AA  EI+K NG NDF LWR ++RAL   QGLL+ L GKE L   LS++EK  L+  ALS   LSLAD++L E
Subjt:  AAMSEIKKLNGRNDFRLWREEVRALSDSQGLLETLRGKEVLSDGLSDREKQPLMSNALSVTQLSLADEILIE

KAF7829260.1 putative rhamnogalacturonate lyase B isoform X3 [Senna tora]1.0e-0854.17Show/hide
Query:  AAMSEIKKLNGRNDFRLWREEVRALSDSQGLLETLRGKEVLSDGLSDREKQPLMSNALSVTQLSLADEILIE
        AA  EI+K NG NDF LW  ++RAL   QGLL+ L GKE L   LS++EK  L+  ALS   LSLAD++L E
Subjt:  AAMSEIKKLNGRNDFRLWREEVRALSDSQGLLETLRGKEVLSDGLSDREKQPLMSNALSVTQLSLADEILIE

KAF7841267.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Senna tora]2.6e-0955.56Show/hide
Query:  AAMSEIKKLNGRNDFRLWREEVRALSDSQGLLETLRGKEVLSDGLSDREKQPLMSNALSVTQLSLADEILIE
        AA  EI+K NG NDF LWR ++RAL   QGLL+ L GKE L   LS++EK  L+  ALS   LSLAD++L E
Subjt:  AAMSEIKKLNGRNDFRLWREEVRALSDSQGLLETLRGKEVLSDGLSDREKQPLMSNALSVTQLSLADEILIE

TrEMBL top hitse value%identityAlignment
A0A061EWE5 CCHC-type domain-containing protein2.4e-0855.88Show/hide
Query:  EIKKLNGRNDFRLWREEVRALSDSQGLLETLRGKEVLSDGLSDREKQPLMSNALSVTQLSLADEILIE
        EI+K NGRNDF LWR ++ AL   QGLL+ L+GKE L   LSD EK  LM  A S   L+L+DE+L E
Subjt:  EIKKLNGRNDFRLWREEVRALSDSQGLLETLRGKEVLSDGLSDREKQPLMSNALSVTQLSLADEILIE

A0A061FYY2 Transducin/WD40 repeat-like superfamily protein1.3e-0958.82Show/hide
Query:  EIKKLNGRNDFRLWREEVRALSDSQGLLETLRGKEVLSDGLSDREKQPLMSNALSVTQLSLADEILIE
        EI+K NGRNDF LWR ++RAL   QGLL+ L+GKE L   LSD EK  LM  A SV  L+L+DE+L E
Subjt:  EIKKLNGRNDFRLWREEVRALSDSQGLLETLRGKEVLSDGLSDREKQPLMSNALSVTQLSLADEILIE

A0A2N9EX70 Uncharacterized protein4.8e-0953.52Show/hide
Query:  AMSEIKKLNGRNDFRLWREEVRALSDSQGLLETLRGKEVLSDGLSDREKQPLMSNALSVTQLSLADEILIE
        A  EI+K NG+NDF LWR ++R L   QGLL  L+GK+ L   LS+ EK+ L+  A S  QLSLADE+L E
Subjt:  AMSEIKKLNGRNDFRLWREEVRALSDSQGLLETLRGKEVLSDGLSDREKQPLMSNALSVTQLSLADEILIE

A0A2N9IYB6 Uncharacterized protein2.7e-0752.78Show/hide
Query:  AAMSEIKKLNGRNDFRLWREEVRALSDSQGLLETLRGKEVLSDGLSDREKQPLMSNALSVTQLSLADEILIE
        AA  EI+K NG+NDF LWR +  AL   QGL   L+GK+ L   LS  EK+ L+  A S  QLSLADE L E
Subjt:  AAMSEIKKLNGRNDFRLWREEVRALSDSQGLLETLRGKEVLSDGLSDREKQPLMSNALSVTQLSLADEILIE

A0A2N9JAK8 gag_pre-integrs domain-containing protein1.1e-0852.11Show/hide
Query:  AMSEIKKLNGRNDFRLWREEVRALSDSQGLLETLRGKEVLSDGLSDREKQPLMSNALSVTQLSLADEILIE
        A +EI+K NG+NDF LW  ++R L   QGLL  L+GK+ L   LS+ EK+ L+  A S  QLSLADE+L E
Subjt:  AMSEIKKLNGRNDFRLWREEVRALSDSQGLLETLRGKEVLSDGLSDREKQPLMSNALSVTQLSLADEILIE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAGTCGGTGGCCATCGGCCTGAATCTGATCGCGCATGAGTCAGGTACCCATCACATGCCTCCTTCCGCGCGACGATATGCATCCCAACACCGACCTTCTCTTCC
CCGAACACCTTGCCATTCAAATCTCCGGCCGATCTGGAGATTGAAAATGGGGAGAATCGGGTTTTTAATGGATGCGGCCATGAGTGAGATCAAGAAATTGAACGGAAGAA
ATGATTTCCGTCTGTGGCGTGAAGAAGTGAGAGCATTATCAGATTCTCAAGGATTACTCGAGACATTGAGAGGTAAAGAAGTTCTGTCTGACGGATTAAGCGATCGCGAA
AAGCAGCCTCTTATGAGTAACGCACTTAGCGTTACACAATTGTCATTAGCGGATGAAATTCTGATTGAATCTGAGTTCTTGCTTACTACTACAACTTCTTCATTCCAATG
TGCTTTGCAGGCATTTCATGTGGAGCCTCTTGATTCCTCGAGTCTAGAAGAATTTCAAAATGTTGAGCAACAACCTGGCAAGAAATGCATCATTTCACTCGTTCCATCAT
CGGTCCAACGCAGCCCACCACATCTGCAGCTCTTGGAGCTCAAGCAAGAAACTTGGAGGAGATGCACTCCCACTCTGGCAAGACAGATTGAGTGCAGTTCTGCATTTTCA
AATCGGAAGCCTGTTTCAGAAGCAAACCAATGCACAGCCAATTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAAGTCGGTGGCCATCGGCCTGAATCTGATCGCGCATGAGTCAGGTACCCATCACATGCCTCCTTCCGCGCGACGATATGCATCCCAACACCGACCTTCTCTTCC
CCGAACACCTTGCCATTCAAATCTCCGGCCGATCTGGAGATTGAAAATGGGGAGAATCGGGTTTTTAATGGATGCGGCCATGAGTGAGATCAAGAAATTGAACGGAAGAA
ATGATTTCCGTCTGTGGCGTGAAGAAGTGAGAGCATTATCAGATTCTCAAGGATTACTCGAGACATTGAGAGGTAAAGAAGTTCTGTCTGACGGATTAAGCGATCGCGAA
AAGCAGCCTCTTATGAGTAACGCACTTAGCGTTACACAATTGTCATTAGCGGATGAAATTCTGATTGAATCTGAGTTCTTGCTTACTACTACAACTTCTTCATTCCAATG
TGCTTTGCAGGCATTTCATGTGGAGCCTCTTGATTCCTCGAGTCTAGAAGAATTTCAAAATGTTGAGCAACAACCTGGCAAGAAATGCATCATTTCACTCGTTCCATCAT
CGGTCCAACGCAGCCCACCACATCTGCAGCTCTTGGAGCTCAAGCAAGAAACTTGGAGGAGATGCACTCCCACTCTGGCAAGACAGATTGAGTGCAGTTCTGCATTTTCA
AATCGGAAGCCTGTTTCAGAAGCAAACCAATGCACAGCCAATTCATAA
Protein sequenceShow/hide protein sequence
MGKSVAIGLNLIAHESGTHHMPPSARRYASQHRPSLPRTPCHSNLRPIWRLKMGRIGFLMDAAMSEIKKLNGRNDFRLWREEVRALSDSQGLLETLRGKEVLSDGLSDRE
KQPLMSNALSVTQLSLADEILIESEFLLTTTTSSFQCALQAFHVEPLDSSSLEEFQNVEQQPGKKCIISLVPSSVQRSPPHLQLLELKQETWRRCTPTLARQIECSSAFS
NRKPVSEANQCTANS