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Moc08g45760 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g45760
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibosomal protein L18ae family
Genome locationchr8:35090168..35091909
RNA-Seq ExpressionMoc08g45760
SyntenyMoc08g45760
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141063.1 uncharacterized protein LOC101207093 isoform X2 [Cucumis sativus]2.9e-6187.22Show/hide
Query:  MDPNARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWN
        MDPN +  +T QLVKSVSDKHLDLLRPSAR CSIF+GQGKDA DH+RSKYTLLRDVED+QVGLYDKPLPCFGCGIGWFSFLLGFFFPL+WYYAT+LYFWN
Subjt:  MDPNARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWN

Query:  VRRDPRERAGLAASAIAALACSVILLVVVAVLL
         RRDPRERAGLAASAIAALACS++LL+VVAVLL
Subjt:  VRRDPRERAGLAASAIAALACSVILLVVVAVLL

XP_008459564.1 PREDICTED: uncharacterized protein LOC103498658 [Cucumis melo]7.6e-6288.72Show/hide
Query:  MDPNARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWN
        MDPN +  +T QLVKSVSDKHLDLLRPSAR CSIF+GQGKDA DH+RSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPL+WYYAT+LYFWN
Subjt:  MDPNARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWN

Query:  VRRDPRERAGLAASAIAALACSVILLVVVAVLL
         RRDPRERAGLAASAIAALACS+ILL+VVAVLL
Subjt:  VRRDPRERAGLAASAIAALACSVILLVVVAVLL

XP_022154700.1 uncharacterized protein LOC111021894 isoform X2 [Momordica charantia]4.4e-62100Show/hide
Query:  MDPNARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWN
        MDPNARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWN
Subjt:  MDPNARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWN

Query:  VRRDPRERAGLAASAIA
        VRRDPRERAGLAASAIA
Subjt:  VRRDPRERAGLAASAIA

XP_022154701.1 uncharacterized protein LOC111021894 isoform X3 [Momordica charantia]6.6e-6699.24Show/hide
Query:  NARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWNVRR
        +ARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWNVRR
Subjt:  NARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWNVRR

Query:  DPRERAGLAASAIAALACSVILLVVVAVLLS
        DPRERAGLAASAIAALACSVILLVVVAVLLS
Subjt:  DPRERAGLAASAIAALACSVILLVVVAVLLS

XP_038889607.1 uncharacterized protein LOC120079478 [Benincasa hispida]1.5e-6290.23Show/hide
Query:  MDPNARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWN
        MDPN +  +T QLVKSVSDKHLDLLRPSAR CSIF+GQGKDASDH+RSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPL+WYYAT+LYFWN
Subjt:  MDPNARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWN

Query:  VRRDPRERAGLAASAIAALACSVILLVVVAVLL
         RRDPRERAGLAASAIAALACS+ILLVVVAVLL
Subjt:  VRRDPRERAGLAASAIAALACSVILLVVVAVLL

TrEMBL top hitse value%identityAlignment
A0A0A0LKM2 Uncharacterized protein1.4e-6187.22Show/hide
Query:  MDPNARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWN
        MDPN +  +T QLVKSVSDKHLDLLRPSAR CSIF+GQGKDA DH+RSKYTLLRDVED+QVGLYDKPLPCFGCGIGWFSFLLGFFFPL+WYYAT+LYFWN
Subjt:  MDPNARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWN

Query:  VRRDPRERAGLAASAIAALACSVILLVVVAVLL
         RRDPRERAGLAASAIAALACS++LL+VVAVLL
Subjt:  VRRDPRERAGLAASAIAALACSVILLVVVAVLL

A0A1S3CAZ9 uncharacterized protein LOC1034986583.7e-6288.72Show/hide
Query:  MDPNARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWN
        MDPN +  +T QLVKSVSDKHLDLLRPSAR CSIF+GQGKDA DH+RSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPL+WYYAT+LYFWN
Subjt:  MDPNARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWN

Query:  VRRDPRERAGLAASAIAALACSVILLVVVAVLL
         RRDPRERAGLAASAIAALACS+ILL+VVAVLL
Subjt:  VRRDPRERAGLAASAIAALACSVILLVVVAVLL

A0A5D3CGZ6 60S ribosomal protein L18a-13.7e-6288.72Show/hide
Query:  MDPNARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWN
        MDPN +  +T QLVKSVSDKHLDLLRPSAR CSIF+GQGKDA DH+RSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPL+WYYAT+LYFWN
Subjt:  MDPNARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWN

Query:  VRRDPRERAGLAASAIAALACSVILLVVVAVLL
         RRDPRERAGLAASAIAALACS+ILL+VVAVLL
Subjt:  VRRDPRERAGLAASAIAALACSVILLVVVAVLL

A0A6J1DKD4 uncharacterized protein LOC111021894 isoform X22.1e-62100Show/hide
Query:  MDPNARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWN
        MDPNARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWN
Subjt:  MDPNARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWN

Query:  VRRDPRERAGLAASAIA
        VRRDPRERAGLAASAIA
Subjt:  VRRDPRERAGLAASAIA

A0A6J1DPH7 uncharacterized protein LOC111021894 isoform X33.2e-6699.24Show/hide
Query:  NARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWNVRR
        +ARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWNVRR
Subjt:  NARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWNVRR

Query:  DPRERAGLAASAIAALACSVILLVVVAVLLS
        DPRERAGLAASAIAALACSVILLVVVAVLLS
Subjt:  DPRERAGLAASAIAALACSVILLVVVAVLLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54217.1 Ribosomal protein L18ae family1.3e-2264.04Show/hide
Query:  RSKYTLLR-DVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWN-VRRDPRERAGLAASAIAALACSVILLVVVAVLL
        + KY L+R D EDS++G + KPLPCFG GIGWFSFLLGF FP  WY AT LY  +   RDPRER+GLAASAIAAL  SV L++ V VL+
Subjt:  RSKYTLLR-DVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWN-VRRDPRERAGLAASAIAALACSVILLVVVAVLL

AT1G54217.2 Ribosomal protein L18ae family2.5e-2361.05Show/hide
Query:  DASDHVRSKYTLLR-DVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWN-VRRDPRERAGLAASAIAALACSVILLVVVAVLL
        D  +  + KY L+R D EDS++G + KPLPCFG GIGWFSFLLGF FP  WY AT LY  +   RDPRER+GLAASAIAAL  SV L++ V VL+
Subjt:  DASDHVRSKYTLLR-DVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWN-VRRDPRERAGLAASAIAALACSVILLVVVAVLL

AT4G26060.1 Ribosomal protein L18ae family1.3e-3562.18Show/hide
Query:  QLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWN-VRRDPRERAG
        +LVKSV+DKH  L+RP A++ S      KDA    + +YTL++DV++ + G+YDKPLPCFGCGIGWFSFLLGF FP +WYYAT+LYF N  R+DPRERAG
Subjt:  QLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWN-VRRDPRERAG

Query:  LAASAIAALACSVILLVVV
        LAASAI A+  S++LLV+V
Subjt:  LAASAIAALACSVILLVVV

AT5G57060.1 FUNCTIONS IN: molecular_function unknown4.2e-3454.81Show/hide
Query:  MDPNAR----TGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVL
        MD N++     G T +LVK ++D+H  L++ ++R  S      KDA    + +YTL++DV+D + G YDKPLPCFGCGIGWFSFLLGF FP +WYYA  L
Subjt:  MDPNAR----TGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVL

Query:  YFWN-VRRDPRERAGLAASAIAALACSVILLVVVA
        YF N  R+DPRERAGLAASAI A+  S++LLV+ A
Subjt:  YFWN-VRRDPRERAGLAASAIAALACSVILLVVVA

AT5G57060.2 BEST Arabidopsis thaliana protein match is: Ribosomal protein L18ae family (TAIR:AT4G26060.1)1.1e-2966.3Show/hide
Query:  KDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWN-VRRDPRERAGLAASAIAALACSVILLVVVA
        KDA    + +YTL++DV+D + G YDKPLPCFGCGIGWFSFLLGF FP +WYYA  LYF N  R+DPRERAGLAASAI A+  S++LLV+ A
Subjt:  KDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWN-VRRDPRERAGLAASAIAALACSVILLVVVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCCAAATGCAAGAACCGGGGAGACTTTCCAACTGGTGAAATCGGTCTCCGACAAGCATCTTGATCTTTTGAGGCCATCTGCCCGATTTTGTTCAATATTCAGAGG
CCAAGGAAAAGACGCTTCAGATCATGTAAGAAGCAAGTATACCCTTCTCAGAGATGTAGAGGATTCTCAAGTAGGGCTATATGACAAACCTCTCCCATGTTTTGGCTGTG
GCATTGGATGGTTTTCTTTCCTCCTCGGGTTCTTTTTCCCACTTGTGTGGTACTATGCCACGGTTCTCTACTTTTGGAACGTCCGTAGAGATCCAAGGGAACGAGCTGGA
CTAGCTGCATCTGCTATTGCTGCTCTTGCATGTTCGGTCATCTTGTTAGTCGTTGTAGCTGTTCTACTGTCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGATCCAAATGCAAGAACCGGGGAGACTTTCCAACTGGTGAAATCGGTCTCCGACAAGCATCTTGATCTTTTGAGGCCATCTGCCCGATTTTGTTCAATATTCAGAGG
CCAAGGAAAAGACGCTTCAGATCATGTAAGAAGCAAGTATACCCTTCTCAGAGATGTAGAGGATTCTCAAGTAGGGCTATATGACAAACCTCTCCCATGTTTTGGCTGTG
GCATTGGATGGTTTTCTTTCCTCCTCGGGTTCTTTTTCCCACTTGTGTGGTACTATGCCACGGTTCTCTACTTTTGGAACGTCCGTAGAGATCCAAGGGAACGAGCTGGA
CTAGCTGCATCTGCTATTGCTGCTCTTGCATGTTCGGTCATCTTGTTAGTCGTTGTAGCTGTTCTACTGTCATAG
Protein sequenceShow/hide protein sequence
MDPNARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWNVRRDPRERAG
LAASAIAALACSVILLVVVAVLLS