; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc08g45840 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g45840
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Genome locationchr8:35123116..35124153
RNA-Seq ExpressionMoc08g45840
SyntenyMoc08g45840
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151719.1 uncharacterized protein LOC111019634 [Momordica charantia]2.4e-9677.2Show/hide
Query:  MRTQMRSMEAMYNEMVLAAGAGSRSENRATRMDALEQRGSHLGPAEEERPEDNGSEGYTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHN-
        MRTQM +ME MY+EMV AAGA SRSENR  R D  EQRG HLGP ++  PE    E YT QRGDLREHLNRKR SSLRKGQSPS SHR+SNQQAESS+N 
Subjt:  MRTQMRSMEAMYNEMVLAAGAGSRSENRATRMDALEQRGSHLGPAEEERPEDNGSEGYTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHN-

Query:  --PAGIITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESLFTSDVLEAPIHPKFKAPTVKPYDGTKDPKDYVEVFEGIMDFQAASDAIKCRAFQ
          P G+ITREEFDQL+ + DAQVEALKAKCE+K+ S +DGDLGES FTSD+LEA I  KFK PT+KPYDG+KDPKDYVEVFEG+MDFQAA+DAIKCR FQ
Subjt:  --PAGIITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESLFTSDVLEAPIHPKFKAPTVKPYDGTKDPKDYVEVFEGIMDFQAASDAIKCRAFQ

Query:  IALTGSARLWYRRLPARSISTYSQLRREFLAQFSSRHYDKKTATHLATIR
        IALTGSARLWYRRLPARSISTYSQLR+EF+ QFSSRHYD+KTATHL TIR
Subjt:  IALTGSARLWYRRLPARSISTYSQLRREFLAQFSSRHYDKKTATHLATIR

XP_022152033.1 uncharacterized protein LOC111019842 [Momordica charantia]1.1e-8090.5Show/hide
Query:  KRGSSLRKGQSPSRSHRSSNQQAESSHN---PAGIITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESLFTSDVLEAPIHPKFKAPTVKPYDGT
        +RGSSLRKGQSPSRSHRSSNQQAESSHN   PAG+ITREEFDQLRG+LDAQVEALKAKCEQK+ SLNDGDLGES FTSDVLEAPI  KFKAPTVKPYDG+
Subjt:  KRGSSLRKGQSPSRSHRSSNQQAESSHN---PAGIITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESLFTSDVLEAPIHPKFKAPTVKPYDGT

Query:  KDPKDYVEVFEGIMDFQAASDAIKCRAFQIALTGSARLWYRRLPARSISTYSQLRREFLAQFSSRHYDKKTATHLATIR
        +DPKDYVEVFEG+MDFQAASD IKCRAFQIALT SARLWYRRLPARSISTYSQLRREFLAQFSSRHYDK+TATHLATIR
Subjt:  KDPKDYVEVFEGIMDFQAASDAIKCRAFQIALTGSARLWYRRLPARSISTYSQLRREFLAQFSSRHYDKKTATHLATIR

XP_022155128.1 uncharacterized protein LOC111022267 [Momordica charantia]4.6e-7979.49Show/hide
Query:  EGYTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHN---PAGIITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESLFTSDVLEAP
        E YT QRGDLREHLNRKR SSLRKGQSPS SHR+SNQQAESS+N   P  +ITREEFDQL+ + DAQVEALKA CE+K+ S +DGDLGE  FT D+LEAP
Subjt:  EGYTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHN---PAGIITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESLFTSDVLEAP

Query:  IHPKFKAPTVKPYDGTKDPKDYVEVFEGIMDFQAASDAIKCRAFQIALTGSARLWYRRLPARSISTYSQLRREFLAQFSSRHYDKKTATHLATIR
        IHPKFK PT+KPYDG+K+PKDYV+VFEG+M+FQAA+DAIKCRAFQIA TGSARLWYRRLPARSISTYSQLR+EF++QFSSR+YD+KTATHLATIR
Subjt:  IHPKFKAPTVKPYDGTKDPKDYVEVFEGIMDFQAASDAIKCRAFQIALTGSARLWYRRLPARSISTYSQLRREFLAQFSSRHYDKKTATHLATIR

XP_022156088.1 uncharacterized protein LOC111023060 [Momordica charantia]1.1e-8066.8Show/hide
Query:  MEAMRTQMRSMEAMYNEMVLAAGAGSRSENRATRMDALEQRGSHLGPAEEERPEDNGSEGYTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESS
        MEAMRTQMR+ME MYN+MV  AGA SRS ++    D  EQ   H  P +EE              GDLR+HLNRKR SS R  ++ +  H++SNQQAESS
Subjt:  MEAMRTQMRSMEAMYNEMVLAAGAGSRSENRATRMDALEQRGSHLGPAEEERPEDNGSEGYTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESS

Query:  HN---PAGIITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESLFTSDVLEAPIHPKFKAPTVKPYDGTKDPKDYVEVFEGIMDFQAASDAIKCR
        +N   P G+ITREEF+QL+ + DAQVEALK +CE+K+ + +DGDLGES FTSD+LEA I PKFK PT+K YDG+KDPKDYVEVFEG+MDFQAA+DAIKCR
Subjt:  HN---PAGIITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESLFTSDVLEAPIHPKFKAPTVKPYDGTKDPKDYVEVFEGIMDFQAASDAIKCR

Query:  AFQIALTGSARLWYRRLPARSISTYSQLRREFLAQFSSRHYDKKTATHLATIR
        AFQIALTGSARLWYRRLPARSISTYSQLR+EF++QF SRHYD+KT THLATIR
Subjt:  AFQIALTGSARLWYRRLPARSISTYSQLRREFLAQFSSRHYDKKTATHLATIR

XP_022159327.1 uncharacterized protein LOC111025738 [Momordica charantia]8.9e-11567.53Show/hide
Query:  MVQPANSTNTTDRRTLAASDAHQREVGAAAVEGQGHDSLAAEPLRRSARITAPALPPAHPRTSKATRGRGGTSKKGARGPAPAPTSENFDALQREMEAMR
        MVQP +STNT DRR L A+D HQREVGA  VEGQ H+ L  EP  RSARIT P L PAHP+  KA RGRGG S++   G APAP+ ENFDALQ+EMEAMR
Subjt:  MVQPANSTNTTDRRTLAASDAHQREVGAAAVEGQGHDSLAAEPLRRSARITAPALPPAHPRTSKATRGRGGTSKKGARGPAPAPTSENFDALQREMEAMR

Query:  TQMRSMEAMYNEMVLAAGAGSRSENRATRMDALEQRGSHLGPAEEERPEDNGSEGYTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPA-
        TQM +ME MYNEMV A GAGSRSE+RA R                             +RGDLR+HL+RKR SSLRKG+SPS SH++SNQQAESS+NP  
Subjt:  TQMRSMEAMYNEMVLAAGAGSRSENRATRMDALEQRGSHLGPAEEERPEDNGSEGYTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPA-

Query:  --GIITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESLFTSDVLEAPIHPKFKAPTVKPYDGTKDPKDYVEVFEGIMDFQAASDAIKCRAFQIA
          G+ITREEFDQL+ + DAQVE LKA+CE K  + +DGDLGES FTSD+LEA I  KFK PT+KPYDG+KDPKDYVEVFEG+M FQAA+DAIK RAFQIA
Subjt:  --GIITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESLFTSDVLEAPIHPKFKAPTVKPYDGTKDPKDYVEVFEGIMDFQAASDAIKCRAFQIA

Query:  LTGSARLWYRRLPARSISTYSQLRREFLAQFSSRHYDKKTATHLATIR
        LT SARLWYRRLPARSISTYSQLR+EF +QFSSRHY++KTATHLATIR
Subjt:  LTGSARLWYRRLPARSISTYSQLRREFLAQFSSRHYDKKTATHLATIR

TrEMBL top hitse value%identityAlignment
A0A6J1DDS5 uncharacterized protein LOC1110198425.3e-8190.5Show/hide
Query:  KRGSSLRKGQSPSRSHRSSNQQAESSHN---PAGIITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESLFTSDVLEAPIHPKFKAPTVKPYDGT
        +RGSSLRKGQSPSRSHRSSNQQAESSHN   PAG+ITREEFDQLRG+LDAQVEALKAKCEQK+ SLNDGDLGES FTSDVLEAPI  KFKAPTVKPYDG+
Subjt:  KRGSSLRKGQSPSRSHRSSNQQAESSHN---PAGIITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESLFTSDVLEAPIHPKFKAPTVKPYDGT

Query:  KDPKDYVEVFEGIMDFQAASDAIKCRAFQIALTGSARLWYRRLPARSISTYSQLRREFLAQFSSRHYDKKTATHLATIR
        +DPKDYVEVFEG+MDFQAASD IKCRAFQIALT SARLWYRRLPARSISTYSQLRREFLAQFSSRHYDK+TATHLATIR
Subjt:  KDPKDYVEVFEGIMDFQAASDAIKCRAFQIALTGSARLWYRRLPARSISTYSQLRREFLAQFSSRHYDKKTATHLATIR

A0A6J1DDW5 uncharacterized protein LOC1110196341.2e-9677.2Show/hide
Query:  MRTQMRSMEAMYNEMVLAAGAGSRSENRATRMDALEQRGSHLGPAEEERPEDNGSEGYTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHN-
        MRTQM +ME MY+EMV AAGA SRSENR  R D  EQRG HLGP ++  PE    E YT QRGDLREHLNRKR SSLRKGQSPS SHR+SNQQAESS+N 
Subjt:  MRTQMRSMEAMYNEMVLAAGAGSRSENRATRMDALEQRGSHLGPAEEERPEDNGSEGYTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHN-

Query:  --PAGIITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESLFTSDVLEAPIHPKFKAPTVKPYDGTKDPKDYVEVFEGIMDFQAASDAIKCRAFQ
          P G+ITREEFDQL+ + DAQVEALKAKCE+K+ S +DGDLGES FTSD+LEA I  KFK PT+KPYDG+KDPKDYVEVFEG+MDFQAA+DAIKCR FQ
Subjt:  --PAGIITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESLFTSDVLEAPIHPKFKAPTVKPYDGTKDPKDYVEVFEGIMDFQAASDAIKCRAFQ

Query:  IALTGSARLWYRRLPARSISTYSQLRREFLAQFSSRHYDKKTATHLATIR
        IALTGSARLWYRRLPARSISTYSQLR+EF+ QFSSRHYD+KTATHL TIR
Subjt:  IALTGSARLWYRRLPARSISTYSQLRREFLAQFSSRHYDKKTATHLATIR

A0A6J1DM55 uncharacterized protein LOC1110222672.2e-7979.49Show/hide
Query:  EGYTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHN---PAGIITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESLFTSDVLEAP
        E YT QRGDLREHLNRKR SSLRKGQSPS SHR+SNQQAESS+N   P  +ITREEFDQL+ + DAQVEALKA CE+K+ S +DGDLGE  FT D+LEAP
Subjt:  EGYTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHN---PAGIITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESLFTSDVLEAP

Query:  IHPKFKAPTVKPYDGTKDPKDYVEVFEGIMDFQAASDAIKCRAFQIALTGSARLWYRRLPARSISTYSQLRREFLAQFSSRHYDKKTATHLATIR
        IHPKFK PT+KPYDG+K+PKDYV+VFEG+M+FQAA+DAIKCRAFQIA TGSARLWYRRLPARSISTYSQLR+EF++QFSSR+YD+KTATHLATIR
Subjt:  IHPKFKAPTVKPYDGTKDPKDYVEVFEGIMDFQAASDAIKCRAFQIALTGSARLWYRRLPARSISTYSQLRREFLAQFSSRHYDKKTATHLATIR

A0A6J1DPN4 uncharacterized protein LOC1110230605.3e-8166.8Show/hide
Query:  MEAMRTQMRSMEAMYNEMVLAAGAGSRSENRATRMDALEQRGSHLGPAEEERPEDNGSEGYTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESS
        MEAMRTQMR+ME MYN+MV  AGA SRS ++    D  EQ   H  P +EE              GDLR+HLNRKR SS R  ++ +  H++SNQQAESS
Subjt:  MEAMRTQMRSMEAMYNEMVLAAGAGSRSENRATRMDALEQRGSHLGPAEEERPEDNGSEGYTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESS

Query:  HN---PAGIITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESLFTSDVLEAPIHPKFKAPTVKPYDGTKDPKDYVEVFEGIMDFQAASDAIKCR
        +N   P G+ITREEF+QL+ + DAQVEALK +CE+K+ + +DGDLGES FTSD+LEA I PKFK PT+K YDG+KDPKDYVEVFEG+MDFQAA+DAIKCR
Subjt:  HN---PAGIITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESLFTSDVLEAPIHPKFKAPTVKPYDGTKDPKDYVEVFEGIMDFQAASDAIKCR

Query:  AFQIALTGSARLWYRRLPARSISTYSQLRREFLAQFSSRHYDKKTATHLATIR
        AFQIALTGSARLWYRRLPARSISTYSQLR+EF++QF SRHYD+KT THLATIR
Subjt:  AFQIALTGSARLWYRRLPARSISTYSQLRREFLAQFSSRHYDKKTATHLATIR

A0A6J1DZJ1 uncharacterized protein LOC1110257384.3e-11567.53Show/hide
Query:  MVQPANSTNTTDRRTLAASDAHQREVGAAAVEGQGHDSLAAEPLRRSARITAPALPPAHPRTSKATRGRGGTSKKGARGPAPAPTSENFDALQREMEAMR
        MVQP +STNT DRR L A+D HQREVGA  VEGQ H+ L  EP  RSARIT P L PAHP+  KA RGRGG S++   G APAP+ ENFDALQ+EMEAMR
Subjt:  MVQPANSTNTTDRRTLAASDAHQREVGAAAVEGQGHDSLAAEPLRRSARITAPALPPAHPRTSKATRGRGGTSKKGARGPAPAPTSENFDALQREMEAMR

Query:  TQMRSMEAMYNEMVLAAGAGSRSENRATRMDALEQRGSHLGPAEEERPEDNGSEGYTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPA-
        TQM +ME MYNEMV A GAGSRSE+RA R                             +RGDLR+HL+RKR SSLRKG+SPS SH++SNQQAESS+NP  
Subjt:  TQMRSMEAMYNEMVLAAGAGSRSENRATRMDALEQRGSHLGPAEEERPEDNGSEGYTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPA-

Query:  --GIITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESLFTSDVLEAPIHPKFKAPTVKPYDGTKDPKDYVEVFEGIMDFQAASDAIKCRAFQIA
          G+ITREEFDQL+ + DAQVE LKA+CE K  + +DGDLGES FTSD+LEA I  KFK PT+KPYDG+KDPKDYVEVFEG+M FQAA+DAIK RAFQIA
Subjt:  --GIITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESLFTSDVLEAPIHPKFKAPTVKPYDGTKDPKDYVEVFEGIMDFQAASDAIKCRAFQIA

Query:  LTGSARLWYRRLPARSISTYSQLRREFLAQFSSRHYDKKTATHLATIR
        LT SARLWYRRLPARSISTYSQLR+EF +QFSSRHY++KTATHLATIR
Subjt:  LTGSARLWYRRLPARSISTYSQLRREFLAQFSSRHYDKKTATHLATIR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCAACCAGCGAATTCGACCAATACGACGGATCGAAGGACTCTAGCTGCCAGCGATGCTCACCAGAGGGAGGTCGGAGCAGCGGCGGTAGAGGGGCAAGGTCACGA
CAGCCTAGCAGCGGAACCCCTCCGCAGGTCGGCACGAATCACCGCGCCTGCCCTGCCGCCTGCACACCCGAGGACGTCCAAGGCCACCCGTGGTCGAGGTGGGACCTCTA
AGAAGGGCGCCCGGGGTCCAGCCCCGGCTCCAACAAGCGAGAATTTTGATGCGCTCCAGAGAGAGATGGAGGCAATGCGCACACAAATGCGCTCCATGGAGGCAATGTAT
AACGAAATGGTGCTAGCTGCAGGCGCAGGGTCCCGATCTGAAAATCGGGCGACACGCATGGACGCACTCGAGCAAAGGGGTTCCCACCTCGGCCCGGCCGAGGAGGAACG
TCCCGAAGACAACGGGAGTGAGGGGTACACTCGCCAGAGGGGAGACCTCCGCGAGCATCTCAACCGAAAGAGAGGCTCGTCTCTCCGAAAAGGGCAGTCGCCATCCCGCT
CCCACAGGAGCTCCAACCAGCAGGCTGAATCCTCTCACAACCCCGCAGGGATAATCACAAGGGAGGAATTCGACCAGCTGAGGGGGGAGCTCGATGCTCAAGTGGAGGCC
TTAAAGGCCAAATGTGAGCAGAAGGACGATTCACTGAACGATGGCGACTTGGGAGAATCGCTTTTCACCTCGGACGTTTTGGAAGCACCAATCCATCCGAAGTTCAAAGC
TCCTACCGTGAAGCCTTATGACGGGACGAAGGACCCCAAGGACTATGTTGAAGTCTTTGAAGGCATCATGGACTTCCAAGCGGCATCAGACGCAATCAAATGTCGCGCCT
TTCAGATCGCGCTTACTGGCAGCGCGCGATTGTGGTACCGGAGATTGCCAGCCAGGTCGATCTCGACCTACTCTCAGCTGAGAAGGGAGTTCCTCGCCCAGTTCTCTTCT
CGGCACTACGACAAAAAGACAGCGACCCATCTCGCCACCATCAGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTCAACCAGCGAATTCGACCAATACGACGGATCGAAGGACTCTAGCTGCCAGCGATGCTCACCAGAGGGAGGTCGGAGCAGCGGCGGTAGAGGGGCAAGGTCACGA
CAGCCTAGCAGCGGAACCCCTCCGCAGGTCGGCACGAATCACCGCGCCTGCCCTGCCGCCTGCACACCCGAGGACGTCCAAGGCCACCCGTGGTCGAGGTGGGACCTCTA
AGAAGGGCGCCCGGGGTCCAGCCCCGGCTCCAACAAGCGAGAATTTTGATGCGCTCCAGAGAGAGATGGAGGCAATGCGCACACAAATGCGCTCCATGGAGGCAATGTAT
AACGAAATGGTGCTAGCTGCAGGCGCAGGGTCCCGATCTGAAAATCGGGCGACACGCATGGACGCACTCGAGCAAAGGGGTTCCCACCTCGGCCCGGCCGAGGAGGAACG
TCCCGAAGACAACGGGAGTGAGGGGTACACTCGCCAGAGGGGAGACCTCCGCGAGCATCTCAACCGAAAGAGAGGCTCGTCTCTCCGAAAAGGGCAGTCGCCATCCCGCT
CCCACAGGAGCTCCAACCAGCAGGCTGAATCCTCTCACAACCCCGCAGGGATAATCACAAGGGAGGAATTCGACCAGCTGAGGGGGGAGCTCGATGCTCAAGTGGAGGCC
TTAAAGGCCAAATGTGAGCAGAAGGACGATTCACTGAACGATGGCGACTTGGGAGAATCGCTTTTCACCTCGGACGTTTTGGAAGCACCAATCCATCCGAAGTTCAAAGC
TCCTACCGTGAAGCCTTATGACGGGACGAAGGACCCCAAGGACTATGTTGAAGTCTTTGAAGGCATCATGGACTTCCAAGCGGCATCAGACGCAATCAAATGTCGCGCCT
TTCAGATCGCGCTTACTGGCAGCGCGCGATTGTGGTACCGGAGATTGCCAGCCAGGTCGATCTCGACCTACTCTCAGCTGAGAAGGGAGTTCCTCGCCCAGTTCTCTTCT
CGGCACTACGACAAAAAGACAGCGACCCATCTCGCCACCATCAGGTAG
Protein sequenceShow/hide protein sequence
MVQPANSTNTTDRRTLAASDAHQREVGAAAVEGQGHDSLAAEPLRRSARITAPALPPAHPRTSKATRGRGGTSKKGARGPAPAPTSENFDALQREMEAMRTQMRSMEAMY
NEMVLAAGAGSRSENRATRMDALEQRGSHLGPAEEERPEDNGSEGYTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPAGIITREEFDQLRGELDAQVEA
LKAKCEQKDDSLNDGDLGESLFTSDVLEAPIHPKFKAPTVKPYDGTKDPKDYVEVFEGIMDFQAASDAIKCRAFQIALTGSARLWYRRLPARSISTYSQLRREFLAQFSS
RHYDKKTATHLATIR