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Moc08g45870 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g45870
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRep-A_N domain-containing protein
Genome locationchr8:35138488..35138988
RNA-Seq ExpressionMoc08g45870
SyntenyMoc08g45870
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
GO:0071704 - organic substance metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
DAD44309.1 TPA_asm: hypothetical protein HUJ06_002539 [Nelumbo nucifera]9.7e-1451.75Show/hide
Query:  TTTPPAAMLSKKFWREGVTPGPAASATSGISREAVSAVTASPATALSFKEARTWNLAAEFDAGAAVGVGVGVGLLELEGLRGNAL--ALPKRWELLALAL
        +TTPPA MLSKKF REG  PGPAASATSGI+ EAV A   +P TA S  + RTW+ A   D  A++          LE L+G  L  A      LL LA 
Subjt:  TTTPPAAMLSKKFWREGVTPGPAASATSGISREAVSAVTASPATALSFKEARTWNLAAEFDAGAAVGVGVGVGLLELEGLRGNAL--ALPKRWELLALAL

Query:  VIGIATETAEVEAI
        V G+A ETAEV+AI
Subjt:  VIGIATETAEVEAI

KAF5935268.1 hypothetical protein HYC85_026397 [Camellia sinensis]7.0e-1250Show/hide
Query:  MAVTTTPPAAMLSKKFWREGVTPGPAASATSGISREAVSAVTASPATALSFKEARTWNL-AAEFDAGAAVGVGVGVGLLELEGLRGNAL-ALPKRWELLA
        M V+TTPPA MLSKKF REG TP PAASATSGI+ EAV A   +P T  SF EA T N     FD   A           LEGL G+ L    +   L  
Subjt:  MAVTTTPPAAMLSKKFWREGVTPGPAASATSGISREAVSAVTASPATALSFKEARTWNL-AAEFDAGAAVGVGVGVGLLELEGLRGNAL-ALPKRWELLA

Query:  LALVIGIATETAEVEAIGER
        +A V G+A + AEVEA+ ER
Subjt:  LALVIGIATETAEVEAIGER

KAG6590026.1 hypothetical protein SDJN03_15449, partial [Cucurbita argyrosperma subsp. sororia]6.3e-1354.24Show/hide
Query:  MAVTTTPPAAMLSKKFWREGVTPGPAASATSGISREAVSAVTASPATALSFKEARTWNLAAEFDAGAAVGVGVGVGLLELEGLR-GNALALPKRW--ELL
        MA TT PPAAMLSKKF+ +G TPGPAASATSGI+ +AV A   SP  A SFK+ RT   +   D GAA      + L +LE    GN   L K W   LL
Subjt:  MAVTTTPPAAMLSKKFWREGVTPGPAASATSGISREAVSAVTASPATALSFKEARTWNLAAEFDAGAAVGVGVGVGLLELEGLR-GNALALPKRW--ELL

Query:  ALALVIGIATETAEVEAI
         +ALV G A+ET EVEAI
Subjt:  ALALVIGIATETAEVEAI

RXH74777.1 hypothetical protein DVH24_029498 [Malus domestica]1.1e-1250.83Show/hide
Query:  MMAVTTTPPAAMLSKKFWREGVTPGPAASATSGISREAVSAVTASPATALSFKEARTWNLAAEFDAGAAVGVGVGVGLLELEGLRGNALALPKR----WE
        M+   TTPPAA+LSKKF+REG TP  AASATSGI+ EAVSA    P TA SF EA T +L  +FDA          G    EGL G+   L K     W 
Subjt:  MMAVTTTPPAAMLSKKFWREGVTPGPAASATSGISREAVSAVTASPATALSFKEARTWNLAAEFDAGAAVGVGVGVGLLELEGLRGNALALPKR----WE

Query:  LLALALVIGIATETAEVEAI
        L  +ALV G+A  TA V+AI
Subjt:  LLALALVIGIATETAEVEAI

RXI06133.1 hypothetical protein DVH24_018175 [Malus domestica]1.3e-1354.7Show/hide
Query:  MAVTTTPPAAMLSKKFWREGVTPGPAASATSGISREAVSAVTASPATALSFKEARTWNLAAEFD-AGAAVGVGV-GVGLLELEGLRGNALALPKRWELLA
        +  TTTPPAAMLSKKF REG TP  AASATSGI+ EAVSA    P TA SFKEA TW+L  +FD AGA    G+ G+GL +L           + W L  
Subjt:  MAVTTTPPAAMLSKKFWREGVTPGPAASATSGISREAVSAVTASPATALSFKEARTWNLAAEFD-AGAAVGVGV-GVGLLELEGLRGNALALPKRWELLA

Query:  LALVIGIATETAEVEAI
        +ALV G+A  TA V AI
Subjt:  LALVIGIATETAEVEAI

TrEMBL top hitse value%identityAlignment
A0A498HYV1 Rep-A_N domain-containing protein5.2e-1350.83Show/hide
Query:  MMAVTTTPPAAMLSKKFWREGVTPGPAASATSGISREAVSAVTASPATALSFKEARTWNLAAEFDAGAAVGVGVGVGLLELEGLRGNALALPKR----WE
        M+   TTPPAA+LSKKF+REG TP  AASATSGI+ EAVSA    P TA SF EA T +L  +FDA          G    EGL G+   L K     W 
Subjt:  MMAVTTTPPAAMLSKKFWREGVTPGPAASATSGISREAVSAVTASPATALSFKEARTWNLAAEFDAGAAVGVGVGVGLLELEGLRGNALALPKR----WE

Query:  LLALALVIGIATETAEVEAI
        L  +ALV G+A  TA V+AI
Subjt:  LLALALVIGIATETAEVEAI

A0A498KLC5 Rep-A_N domain-containing protein6.1e-1454.7Show/hide
Query:  MAVTTTPPAAMLSKKFWREGVTPGPAASATSGISREAVSAVTASPATALSFKEARTWNLAAEFD-AGAAVGVGV-GVGLLELEGLRGNALALPKRWELLA
        +  TTTPPAAMLSKKF REG TP  AASATSGI+ EAVSA    P TA SFKEA TW+L  +FD AGA    G+ G+GL +L           + W L  
Subjt:  MAVTTTPPAAMLSKKFWREGVTPGPAASATSGISREAVSAVTASPATALSFKEARTWNLAAEFD-AGAAVGVGV-GVGLLELEGLRGNALALPKRWELLA

Query:  LALVIGIATETAEVEAI
        +ALV G+A  TA V AI
Subjt:  LALVIGIATETAEVEAI

A0A5N5MFU5 PABS domain-containing protein3.7e-1153.61Show/hide
Query:  MMAVTTTPPAAMLSKKFWREGVTPGPAASATSGISREAVSAVTASPATALSFKEARTWNLAAEFDAGAAVGVGVGVGLLELEGLRGNALALPKRWEL
        ++A +TTPPAAMLSKK  R+G  PGPAASATSGI+ EAV+A   SP TA SFKEA T NLA + D    V     +  L++ GLR       K WEL
Subjt:  MMAVTTTPPAAMLSKKFWREGVTPGPAASATSGISREAVSAVTASPATALSFKEARTWNLAAEFDAGAAVGVGVGVGLLELEGLRGNALALPKRWEL

A0A6A4KXL9 Replication protein A subunit (Fragment)8.3e-1150.43Show/hide
Query:  MMAVTTTPPAAMLSKKFWREGVTPGPAASATSGISREAVSAVTASPATALSFKEARTWNLAAEFDAGAAVGVGVGVGLLELEGLRGNAL-ALPKRWELLA
        ++  +T PPA MLSKKF REG T   AASATSGI  EAV+AV  +P TA S  EA T N    FDA  A           LEGL GN L A P+   L  
Subjt:  MMAVTTTPPAAMLSKKFWREGVTPGPAASATSGISREAVSAVTASPATALSFKEARTWNLAAEFDAGAAVGVGVGVGLLELEGLRGNAL-ALPKRWELLA

Query:  LALVIGIATETAEVEAI
        +A V G+A  TA+VEAI
Subjt:  LALVIGIATETAEVEAI

A0A7J7G758 Replication protein A subunit3.4e-1250Show/hide
Query:  MAVTTTPPAAMLSKKFWREGVTPGPAASATSGISREAVSAVTASPATALSFKEARTWNL-AAEFDAGAAVGVGVGVGLLELEGLRGNAL-ALPKRWELLA
        M V+TTPPA MLSKKF REG TP PAASATSGI+ EAV A   +P T  SF EA T N     FD   A           LEGL G+ L    +   L  
Subjt:  MAVTTTPPAAMLSKKFWREGVTPGPAASATSGISREAVSAVTASPATALSFKEARTWNL-AAEFDAGAAVGVGVGVGLLELEGLRGNAL-ALPKRWELLA

Query:  LALVIGIATETAEVEAIGER
        +A V G+A + AEVEA+ ER
Subjt:  LALVIGIATETAEVEAIGER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGCAGTGACCACTACTCCACCGGCGGCAATGCTGAGCAAGAAGTTCTGGAGAGAAGGAGTGACGCCAGGCCCAGCAGCTTCAGCCACCTCAGGAATAAGC
AGGGAGGCCGTGAGCGCAGTGACAGCGAGTCCAGCAACTGCCTTGTCCTTCAAGGAAGCCCGCACTTGGAACTTGGCGGCGGAGTTCGATGCAGGCGCAGCAGTT
GGAGTTGGAGTTGGAGTTGGGTTGCTGGAACTGGAAGGCCTCAGAGGCAACGCCCTTGCCCTGCCAAAGCGTTGGGAGCTCCTCGCGCTCGCCTTAGTAATCGGC
ATCGCCACCGAGACTGCGGAAGTGGAAGCCATTGGGGAGAGAGCGCAGAGGTGGTGGAATGGAAGCTTCAACGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGGCAGTGACCACTACTCCACCGGCGGCAATGCTGAGCAAGAAGTTCTGGAGAGAAGGAGTGACGCCAGGCCCAGCAGCTTCAGCCACCTCAGGAATAAGC
AGGGAGGCCGTGAGCGCAGTGACAGCGAGTCCAGCAACTGCCTTGTCCTTCAAGGAAGCCCGCACTTGGAACTTGGCGGCGGAGTTCGATGCAGGCGCAGCAGTT
GGAGTTGGAGTTGGAGTTGGGTTGCTGGAACTGGAAGGCCTCAGAGGCAACGCCCTTGCCCTGCCAAAGCGTTGGGAGCTCCTCGCGCTCGCCTTAGTAATCGGC
ATCGCCACCGAGACTGCGGAAGTGGAAGCCATTGGGGAGAGAGCGCAGAGGTGGTGGAATGGAAGCTTCAACGAGTGA
Protein sequenceShow/hide protein sequence
MMAVTTTPPAAMLSKKFWREGVTPGPAASATSGISREAVSAVTASPATALSFKEARTWNLAAEFDAGAAVGVGVGVGLLELEGLRGNALALPKRWELLALALVIG
IATETAEVEAIGERAQRWWNGSFNE