; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc09g00330 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g00330
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptiontranscription factor PIF1
Genome locationchr9:388379..390337
RNA-Seq ExpressionMoc09g00330
SyntenyMoc09g00330
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR031066 - Basic helix-loop-helix (bHLH) transcription factors ALC-like, plant
IPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050609.1 transcription factor PIF1 [Cucumis melo var. makuwa]5.0e-9279.06Show/hide
Query:  MKALQELIPRCNKTDKASMLDEAIEYLKALQLQVQMMSSMGCGMMPVMFPGIQQYLPPPMGMGIGMGMGMGMEMGMNRPMMPFPNLLGGPNLPMQAG--A
        MKALQELIPRCNKTDKASMLDEAIEYLK LQLQVQMM SMGCGMMP+MFPG+QQYLPPPM    GMGMGMGMEMGMNRPMM F NLL G NLPMQAG  A
Subjt:  MKALQELIPRCNKTDKASMLDEAIEYLKALQLQVQMMSSMGCGMMPVMFPGIQQYLPPPMGMGIGMGMGMGMEMGMNRPMMPFPNLLGGPNLPMQAG--A

Query:  AAHLGPRFPLPAFAMPPVPGSDPSRVQP-TNQANQMLNSVGTQHTIPPPVSGFSDSYQQFVSSNQMQFPATQRLQNQQPIQPDTSRPCTNRGPENFENHQ
        AAHLGPRFPLP FAMPPVPG+DPSR     NQ   M NSVGTQ+T PP V GF DSYQQF+S  QMQF  TQ LQNQ P+QP+TSRPCT+RGPEN ENHQ
Subjt:  AAHLGPRFPLPAFAMPPVPGSDPSRVQP-TNQANQMLNSVGTQHTIPPPVSGFSDSYQQFVSSNQMQFPATQRLQNQQPIQPDTSRPCTNRGPENFENHQ

Query:  SDCDRKKVELQMVMGNLLLLHETSVSHCIALRWG
        SDCDRKKVELQMVMG LLLLHET V H + +R G
Subjt:  SDCDRKKVELQMVMGNLLLLHETSVSHCIALRWG

TYK07831.1 transcription factor PIF1 [Cucumis melo var. makuwa]5.0e-9279.06Show/hide
Query:  MKALQELIPRCNKTDKASMLDEAIEYLKALQLQVQMMSSMGCGMMPVMFPGIQQYLPPPMGMGIGMGMGMGMEMGMNRPMMPFPNLLGGPNLPMQAG--A
        MKALQELIPRCNKTDKASMLDEAIEYLK LQLQVQMM SMGCGMMP+MFPG+QQYLPPPM    GMGMGMGMEMGMNRPMM F NLL G NLPMQAG  A
Subjt:  MKALQELIPRCNKTDKASMLDEAIEYLKALQLQVQMMSSMGCGMMPVMFPGIQQYLPPPMGMGIGMGMGMGMEMGMNRPMMPFPNLLGGPNLPMQAG--A

Query:  AAHLGPRFPLPAFAMPPVPGSDPSRVQP-TNQANQMLNSVGTQHTIPPPVSGFSDSYQQFVSSNQMQFPATQRLQNQQPIQPDTSRPCTNRGPENFENHQ
        AAHLGPRFPLP FAMPPVPG+DPSR     NQ   M NSVGTQ+T PP V GF DSYQQF+S  QMQF  TQ LQNQ P+QP+TSRPCT+RGPEN ENHQ
Subjt:  AAHLGPRFPLPAFAMPPVPGSDPSRVQP-TNQANQMLNSVGTQHTIPPPVSGFSDSYQQFVSSNQMQFPATQRLQNQQPIQPDTSRPCTNRGPENFENHQ

Query:  SDCDRKKVELQMVMGNLLLLHETSVSHCIALRWG
        SDCDRKKVELQMVMG LLLLHET V H + +R G
Subjt:  SDCDRKKVELQMVMGNLLLLHETSVSHCIALRWG

XP_022143876.1 transcription factor PIF1 [Momordica charantia]4.9e-156100Show/hide
Query:  MKALQELIPRCNKTDKASMLDEAIEYLKALQLQVQMMSSMGCGMMPVMFPGIQQYLPPPMGMGIGMGMGMGMEMGMNRPMMPFPNLLGGPNLPMQAGAAA
        MKALQELIPRCNKTDKASMLDEAIEYLKALQLQVQMMSSMGCGMMPVMFPGIQQYLPPPMGMGIGMGMGMGMEMGMNRPMMPFPNLLGGPNLPMQAGAAA
Subjt:  MKALQELIPRCNKTDKASMLDEAIEYLKALQLQVQMMSSMGCGMMPVMFPGIQQYLPPPMGMGIGMGMGMGMEMGMNRPMMPFPNLLGGPNLPMQAGAAA

Query:  HLGPRFPLPAFAMPPVPGSDPSRVQPTNQANQMLNSVGTQHTIPPPVSGFSDSYQQFVSSNQMQFPATQRLQNQQPIQPDTSRPCTNRGPENFENHQSDC
        HLGPRFPLPAFAMPPVPGSDPSRVQPTNQANQMLNSVGTQHTIPPPVSGFSDSYQQFVSSNQMQFPATQRLQNQQPIQPDTSRPCTNRGPENFENHQSDC
Subjt:  HLGPRFPLPAFAMPPVPGSDPSRVQPTNQANQMLNSVGTQHTIPPPVSGFSDSYQQFVSSNQMQFPATQRLQNQQPIQPDTSRPCTNRGPENFENHQSDC

Query:  DRKKVELQMVMGNLLLLHETSVSHCIALRWGRIRGEDADGSNLVTWCGRLLSSSSSGGIEVFETLQLQSHYHFAPGP
        DRKKVELQMVMGNLLLLHETSVSHCIALRWGRIRGEDADGSNLVTWCGRLLSSSSSGGIEVFETLQLQSHYHFAPGP
Subjt:  DRKKVELQMVMGNLLLLHETSVSHCIALRWGRIRGEDADGSNLVTWCGRLLSSSSSGGIEVFETLQLQSHYHFAPGP

XP_023514413.1 transcription factor PIF1-like isoform X2 [Cucurbita pepo subsp. pepo]5.4e-7879.7Show/hide
Query:  MKALQELIPRCNKTDKASMLDEAIEYLKALQLQVQMMSSMGCGMMPVMFPGIQQYLPPPMGMGIGMGMGMGMEMGMNRPMMPFPNLLGGPNLPMQAG---
        MKALQELIPRCNKTDKASMLDEAIEYLK LQLQVQMM SMGCGMMP+MFPG+QQYLPPPMGMGIGMGMGMGMEMGMNRPMM FPNLL G NLPMQAG   
Subjt:  MKALQELIPRCNKTDKASMLDEAIEYLKALQLQVQMMSSMGCGMMPVMFPGIQQYLPPPMGMGIGMGMGMGMEMGMNRPMMPFPNLLGGPNLPMQAG---

Query:  -AAAHLGPRFPLPAFAMPPVPGSDPSRVQP-TNQANQMLNSVGTQHTIPPPVSGFSDSYQQFVSSNQMQFPATQRLQNQQPIQPDTSRPCTNRGPEN
         AAAHLG RFPLPAFAMPPVPGS+PS+ Q   NQ + ++N  GTQ+T PPPVSGF DSYQQF+SSNQ+QF   Q +QNQQP+QP+TSRPCT+R P+N
Subjt:  -AAAHLGPRFPLPAFAMPPVPGSDPSRVQP-TNQANQMLNSVGTQHTIPPPVSGFSDSYQQFVSSNQMQFPATQRLQNQQPIQPDTSRPCTNRGPEN

XP_038898937.1 transcription factor PIF1 [Benincasa hispida]1.4e-8181.09Show/hide
Query:  MKALQELIPRCNKTDKASMLDEAIEYLKALQLQVQMMSSMGCGMMPVMFPGIQQYLPPPMGMGIGMGMGMGMEMGMNRPMMPFPNLLGGPNLPMQAG--A
        MKALQELIPRCN+TDKASMLDEAIEYLK LQLQVQMM SMGCGMMP+MFPG+QQYLPPPMGMG+GMGMGMGMEMGMNRPMM F NLL G NLPMQAG  A
Subjt:  MKALQELIPRCNKTDKASMLDEAIEYLKALQLQVQMMSSMGCGMMPVMFPGIQQYLPPPMGMGIGMGMGMGMEMGMNRPMMPFPNLLGGPNLPMQAG--A

Query:  AAHLGPRFPLPAFAMPPVPGSDPSRVQ-PTNQANQMLNSVGTQHTIPPPVSGFSDSYQQFVSSNQMQFPATQRLQNQQPIQPDTSRPCTNRGPENFENHQ
        AAH+GPRFPLP FAMPPVPG+DPSR Q   NQ + M NSVGTQ+T PP V GF DSYQQF+SS QMQF  TQ LQNQQP+QP+T+RPCT+RGPEN ENHQ
Subjt:  AAHLGPRFPLPAFAMPPVPGSDPSRVQ-PTNQANQMLNSVGTQHTIPPPVSGFSDSYQQFVSSNQMQFPATQRLQNQQPIQPDTSRPCTNRGPENFENHQ

Query:  S
        S
Subjt:  S

TrEMBL top hitse value%identityAlignment
A0A1S3CFZ1 transcription factor PIF12.2e-7779.6Show/hide
Query:  MKALQELIPRCNKTDKASMLDEAIEYLKALQLQVQMMSSMGCGMMPVMFPGIQQYLPPPMGMGIGMGMGMGMEMGMNRPMMPFPNLLGGPNLPMQAG--A
        MKALQELIPRCNKTDKASMLDEAIEYLK LQLQVQMM SMGCGMMP+MFPG+QQYLPPPM    GMGMGMGMEMGMNRPMM F NLL G NLPMQAG  A
Subjt:  MKALQELIPRCNKTDKASMLDEAIEYLKALQLQVQMMSSMGCGMMPVMFPGIQQYLPPPMGMGIGMGMGMGMEMGMNRPMMPFPNLLGGPNLPMQAG--A

Query:  AAHLGPRFPLPAFAMPPVPGSDPSRVQP-TNQANQMLNSVGTQHTIPPPVSGFSDSYQQFVSSNQMQFPATQRLQNQQPIQPDTSRPCTNRGPENFENHQ
        AAHLGPRFPLP FAMPPVPG+DPSR     NQ   M NSVGTQ+T PP V GF DSYQQF+S  QMQF  TQ LQNQ P+QP+TSRPCT+RGPEN ENHQ
Subjt:  AAHLGPRFPLPAFAMPPVPGSDPSRVQP-TNQANQMLNSVGTQHTIPPPVSGFSDSYQQFVSSNQMQFPATQRLQNQQPIQPDTSRPCTNRGPENFENHQ

Query:  S
        S
Subjt:  S

A0A5A7UAT5 Transcription factor PIF12.4e-9279.06Show/hide
Query:  MKALQELIPRCNKTDKASMLDEAIEYLKALQLQVQMMSSMGCGMMPVMFPGIQQYLPPPMGMGIGMGMGMGMEMGMNRPMMPFPNLLGGPNLPMQAG--A
        MKALQELIPRCNKTDKASMLDEAIEYLK LQLQVQMM SMGCGMMP+MFPG+QQYLPPPM    GMGMGMGMEMGMNRPMM F NLL G NLPMQAG  A
Subjt:  MKALQELIPRCNKTDKASMLDEAIEYLKALQLQVQMMSSMGCGMMPVMFPGIQQYLPPPMGMGIGMGMGMGMEMGMNRPMMPFPNLLGGPNLPMQAG--A

Query:  AAHLGPRFPLPAFAMPPVPGSDPSRVQP-TNQANQMLNSVGTQHTIPPPVSGFSDSYQQFVSSNQMQFPATQRLQNQQPIQPDTSRPCTNRGPENFENHQ
        AAHLGPRFPLP FAMPPVPG+DPSR     NQ   M NSVGTQ+T PP V GF DSYQQF+S  QMQF  TQ LQNQ P+QP+TSRPCT+RGPEN ENHQ
Subjt:  AAHLGPRFPLPAFAMPPVPGSDPSRVQP-TNQANQMLNSVGTQHTIPPPVSGFSDSYQQFVSSNQMQFPATQRLQNQQPIQPDTSRPCTNRGPENFENHQ

Query:  SDCDRKKVELQMVMGNLLLLHETSVSHCIALRWG
        SDCDRKKVELQMVMG LLLLHET V H + +R G
Subjt:  SDCDRKKVELQMVMGNLLLLHETSVSHCIALRWG

A0A5D3C7G7 Transcription factor PIF12.4e-9279.06Show/hide
Query:  MKALQELIPRCNKTDKASMLDEAIEYLKALQLQVQMMSSMGCGMMPVMFPGIQQYLPPPMGMGIGMGMGMGMEMGMNRPMMPFPNLLGGPNLPMQAG--A
        MKALQELIPRCNKTDKASMLDEAIEYLK LQLQVQMM SMGCGMMP+MFPG+QQYLPPPM    GMGMGMGMEMGMNRPMM F NLL G NLPMQAG  A
Subjt:  MKALQELIPRCNKTDKASMLDEAIEYLKALQLQVQMMSSMGCGMMPVMFPGIQQYLPPPMGMGIGMGMGMGMEMGMNRPMMPFPNLLGGPNLPMQAG--A

Query:  AAHLGPRFPLPAFAMPPVPGSDPSRVQP-TNQANQMLNSVGTQHTIPPPVSGFSDSYQQFVSSNQMQFPATQRLQNQQPIQPDTSRPCTNRGPENFENHQ
        AAHLGPRFPLP FAMPPVPG+DPSR     NQ   M NSVGTQ+T PP V GF DSYQQF+S  QMQF  TQ LQNQ P+QP+TSRPCT+RGPEN ENHQ
Subjt:  AAHLGPRFPLPAFAMPPVPGSDPSRVQP-TNQANQMLNSVGTQHTIPPPVSGFSDSYQQFVSSNQMQFPATQRLQNQQPIQPDTSRPCTNRGPENFENHQ

Query:  SDCDRKKVELQMVMGNLLLLHETSVSHCIALRWG
        SDCDRKKVELQMVMG LLLLHET V H + +R G
Subjt:  SDCDRKKVELQMVMGNLLLLHETSVSHCIALRWG

A0A6J1CRM2 transcription factor PIF12.4e-156100Show/hide
Query:  MKALQELIPRCNKTDKASMLDEAIEYLKALQLQVQMMSSMGCGMMPVMFPGIQQYLPPPMGMGIGMGMGMGMEMGMNRPMMPFPNLLGGPNLPMQAGAAA
        MKALQELIPRCNKTDKASMLDEAIEYLKALQLQVQMMSSMGCGMMPVMFPGIQQYLPPPMGMGIGMGMGMGMEMGMNRPMMPFPNLLGGPNLPMQAGAAA
Subjt:  MKALQELIPRCNKTDKASMLDEAIEYLKALQLQVQMMSSMGCGMMPVMFPGIQQYLPPPMGMGIGMGMGMGMEMGMNRPMMPFPNLLGGPNLPMQAGAAA

Query:  HLGPRFPLPAFAMPPVPGSDPSRVQPTNQANQMLNSVGTQHTIPPPVSGFSDSYQQFVSSNQMQFPATQRLQNQQPIQPDTSRPCTNRGPENFENHQSDC
        HLGPRFPLPAFAMPPVPGSDPSRVQPTNQANQMLNSVGTQHTIPPPVSGFSDSYQQFVSSNQMQFPATQRLQNQQPIQPDTSRPCTNRGPENFENHQSDC
Subjt:  HLGPRFPLPAFAMPPVPGSDPSRVQPTNQANQMLNSVGTQHTIPPPVSGFSDSYQQFVSSNQMQFPATQRLQNQQPIQPDTSRPCTNRGPENFENHQSDC

Query:  DRKKVELQMVMGNLLLLHETSVSHCIALRWGRIRGEDADGSNLVTWCGRLLSSSSSGGIEVFETLQLQSHYHFAPGP
        DRKKVELQMVMGNLLLLHETSVSHCIALRWGRIRGEDADGSNLVTWCGRLLSSSSSGGIEVFETLQLQSHYHFAPGP
Subjt:  DRKKVELQMVMGNLLLLHETSVSHCIALRWGRIRGEDADGSNLVTWCGRLLSSSSSGGIEVFETLQLQSHYHFAPGP

A0A6J1H6P0 transcription factor PIF1-like isoform X21.7e-7779.59Show/hide
Query:  MKALQELIPRCNKTDKASMLDEAIEYLKALQLQVQMMSSMGCGMMPVMFPGIQQYLPPPMGMGIGMGMGMGMEMGMNRPMMPFPNLLGGPNLPMQAG---
        MKALQELIPRCNKTDKASMLDEAIEYLK LQLQVQMM SMGCGMMP+MFPG+QQYLPPPMGMGIGMGMGMGMEMGMNRPMM FPNLL G NLPMQAG   
Subjt:  MKALQELIPRCNKTDKASMLDEAIEYLKALQLQVQMMSSMGCGMMPVMFPGIQQYLPPPMGMGIGMGMGMGMEMGMNRPMMPFPNLLGGPNLPMQAG---

Query:  AAAHLGPRFPLPAFAMPPVPGSDPSRVQP-TNQANQMLNSVGTQHTIPPPVSGFSDSYQQFVSSNQMQFPATQRLQNQQPIQPDTSRPCTNRGPEN
        AAAHLG RFPLPAFAMPPV GS+PS+ Q   NQ + ++N  GTQ+T PPPVSGF DSYQQF+SSNQ+QF   Q +QNQQP+QP+TSRPCT+R P+N
Subjt:  AAAHLGPRFPLPAFAMPPVPGSDPSRVQP-TNQANQMLNSVGTQHTIPPPVSGFSDSYQQFVSSNQMQFPATQRLQNQQPIQPDTSRPCTNRGPEN

SwissProt top hitse value%identityAlignment
Q0JNI9 Transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 157.4e-1437.82Show/hide
Query:  MKALQELIPRCNKTDKASMLDEAIEYLKALQLQVQMMSSMGCGMM--PVMFPGIQQYLP-PPMG----MGIGMGMGMGMEMGMNRPMMPFPNLLGG----
        M+ALQELIP CNK DKASMLDEAIEYLK LQLQVQMM SMG G+   P++ P   Q+L  PPM     +G+G+G GMG+    N   +  P + G     
Subjt:  MKALQELIPRCNKTDKASMLDEAIEYLKALQLQVQMMSSMGCGMM--PVMFPGIQQYLP-PPMG----MGIGMGMGMGMEMGMNRPMMPFPNLLGG----

Query:  PNLPMQAGAAAHLGPRFPLPAFAMP--PVPGSDPSRVQPTNQANQMLNSVGTQHTIPPPVSG----FSDSYQQFVSSNQMQFPATQRLQNQQP
        P +P  +     +     +P F +P   +P S  S     + A   +   G      P VSG         QQ +++ Q Q    + +Q   P
Subjt:  PNLPMQAGAAAHLGPRFPLPAFAMP--PVPGSDPSRVQPTNQANQMLNSVGTQHTIPPPVSG----FSDSYQQFVSSNQMQFPATQRLQNQQP

Q10CH5 Transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 131.0e-1840.51Show/hide
Query:  MKALQELIPRCNKTDKASMLDEAIEYLKALQLQVQMMSSMGCGMMPVMFPGIQQYLPPPMGMGIGMGMGMGMEMGMNRPMMPFPNLLGGPNLPMQAGAAA
        M+ALQELIP CNKTDKAS+LDEAIEYLK+LQ+QVQ+M  M  GM P+MFPG  Q++PP             M +GMN   MP             A   +
Subjt:  MKALQELIPRCNKTDKASMLDEAIEYLKALQLQVQMMSSMGCGMMPVMFPGIQQYLPPPMGMGIGMGMGMGMEMGMNRPMMPFPNLLGGPNLPMQAGAAA

Query:  HLGPRFPLPAFAMP-PVPGSDPSRVQPTNQANQMLNSVGTQ-----------HTIPPPVSGFSDSYQQFVSSNQM-QFPATQRLQNQQPIQPDTS
        H+  R P    +MP  +P +    + P N ANQM N    +            T+PP VSG   S  Q    NQ+ +  A+  L N    QP TS
Subjt:  HLGPRFPLPAFAMP-PVPGSDPSRVQPTNQANQMLNSVGTQ-----------HTIPPPVSGFSDSYQQFVSSNQM-QFPATQRLQNQQPIQPDTS

Q8GT73 Transcription factor bHLH1196.9e-2042.19Show/hide
Query:  MKALQELIPRCNKTDKASMLDEAIEYLKALQLQVQMMSSMGCGMM-PVMFPGIQQYLPPPMGMGIGMGMGMGMEMGMNR--PMMPFPNLLGGPNLPMQAG
        MK LQEL+PRC KTDK SML++ IEY+K+LQLQ+QMM SMG GMM P+M  G  Q   P M MG+          GMNR  P +PFP    G   P + G
Subjt:  MKALQELIPRCNKTDKASMLDEAIEYLKALQLQVQMMSSMGCGMM-PVMFPGIQQYLPPPMGMGIGMGMGMGMEMGMNR--PMMPFPNLLGGPNLPMQAG

Query:  AAAHLGPRFPLPAFAMPPVPGSDPSRVQ-PTNQANQMLNSVGTQHTIPPPVSGFSDSYQQFVSSNQMQFPATQRLQNQQPIQPDTSRPCTNR
          A +GP +P   +  P    SD SRV  P+  +N + N         P    + + Y QFV  +QMQ P    LQ Q   QP  S   T++
Subjt:  AAAHLGPRFPLPAFAMPPVPGSDPSRVQ-PTNQANQMLNSVGTQHTIPPPVSGFSDSYQQFVSSNQMQFPATQRLQNQQPIQPDTSRPCTNR

Q8GZM7 Transcription factor PIF18.7e-3147.98Show/hide
Query:  MKALQELIPRCNKTDKASMLDEAIEYLKALQLQVQMMSSMGCGMMPVMFPGIQQYLPPPMGMGIGMGMGMGMEMGMNRP-MMPFPNLLGGPN-LPMQAGA
        MKALQELIPRCNK+DKASMLDEAIEY+K+LQLQ+QMM SMGCGMMP+M+PG+QQY+P        M MGMGM   +  P  MPFPN+L     LP Q   
Subjt:  MKALQELIPRCNKTDKASMLDEAIEYLKALQLQVQMMSSMGCGMMPVMFPGIQQYLPPPMGMGIGMGMGMGMEMGMNRP-MMPFPNLLGGPN-LPMQAGA

Query:  AAHLGPRFPLPAFAMPPVPGSDPSRVQPTNQANQMLNSVGTQHTIPPPVSGFSDSYQQFVSSNQMQFPATQRLQNQQPIQPDTSRPCTNRGPENFENH
        A   GP++P+ A        SDPSRV   NQ     +        P   +G++D YQQF   +  Q P   + QNQ    P +SR  +++  E+  NH
Subjt:  AAHLGPRFPLPAFAMPPVPGSDPSRVQPTNQANQMLNSVGTQHTIPPPVSGFSDSYQQFVSSNQMQFPATQRLQNQQPIQPDTSRPCTNRGPENFENH

Q9SVU7 Putative transcription factor bHLH0564.9e-1836.55Show/hide
Query:  MKALQELIPRCNKTDKASMLDEAIEYLKALQLQVQMMSSMGCGMMPVMFPG-IQQYLPPPMGMGIGMGMGMGMEMGMNRPMMPFPNLLGGPNLPMQAGAA
        MK LQ+LIPRCNK+ K S LD+AIEY+K+LQ Q+Q M      M P+M  G  QQ++P            M M+M    P +PFP    G + PM A  A
Subjt:  MKALQELIPRCNKTDKASMLDEAIEYLKALQLQVQMMSSMGCGMMPVMFPG-IQQYLPPPMGMGIGMGMGMGMEMGMNRPMMPFPNLLGGPNLPMQAGAA

Query:  AHLGPRFPLPAFAMPPVPGSDPSRVQ-PTNQANQMLNSVGTQHTIPPPVSGFSDSYQQFVSSNQMQFPATQRLQNQQPIQPDTSRPCTNRGPENFEN
          +GP +P P +  P +   DPSRV+ P+ Q N + N         P    + + Y QF   +Q+Q P     Q Q   Q  + +  +++ PE+ EN
Subjt:  AHLGPRFPLPAFAMPPVPGSDPSRVQ-PTNQANQMLNSVGTQHTIPPPVSGFSDSYQQFVSSNQMQFPATQRLQNQQPIQPDTSRPCTNRGPENFEN

Arabidopsis top hitse value%identityAlignment
AT2G20180.1 phytochrome interacting factor 3-like 56.2e-3247.98Show/hide
Query:  MKALQELIPRCNKTDKASMLDEAIEYLKALQLQVQMMSSMGCGMMPVMFPGIQQYLPPPMGMGIGMGMGMGMEMGMNRP-MMPFPNLLGGPN-LPMQAGA
        MKALQELIPRCNK+DKASMLDEAIEY+K+LQLQ+QMM SMGCGMMP+M+PG+QQY+P        M MGMGM   +  P  MPFPN+L     LP Q   
Subjt:  MKALQELIPRCNKTDKASMLDEAIEYLKALQLQVQMMSSMGCGMMPVMFPGIQQYLPPPMGMGIGMGMGMGMEMGMNRP-MMPFPNLLGGPN-LPMQAGA

Query:  AAHLGPRFPLPAFAMPPVPGSDPSRVQPTNQANQMLNSVGTQHTIPPPVSGFSDSYQQFVSSNQMQFPATQRLQNQQPIQPDTSRPCTNRGPENFENH
        A   GP++P+ A        SDPSRV   NQ     +        P   +G++D YQQF   +  Q P   + QNQ    P +SR  +++  E+  NH
Subjt:  AAHLGPRFPLPAFAMPPVPGSDPSRVQPTNQANQMLNSVGTQHTIPPPVSGFSDSYQQFVSSNQMQFPATQRLQNQQPIQPDTSRPCTNRGPENFENH

AT2G20180.2 phytochrome interacting factor 3-like 56.2e-3247.98Show/hide
Query:  MKALQELIPRCNKTDKASMLDEAIEYLKALQLQVQMMSSMGCGMMPVMFPGIQQYLPPPMGMGIGMGMGMGMEMGMNRP-MMPFPNLLGGPN-LPMQAGA
        MKALQELIPRCNK+DKASMLDEAIEY+K+LQLQ+QMM SMGCGMMP+M+PG+QQY+P        M MGMGM   +  P  MPFPN+L     LP Q   
Subjt:  MKALQELIPRCNKTDKASMLDEAIEYLKALQLQVQMMSSMGCGMMPVMFPGIQQYLPPPMGMGIGMGMGMGMEMGMNRP-MMPFPNLLGGPN-LPMQAGA

Query:  AAHLGPRFPLPAFAMPPVPGSDPSRVQPTNQANQMLNSVGTQHTIPPPVSGFSDSYQQFVSSNQMQFPATQRLQNQQPIQPDTSRPCTNRGPENFENH
        A   GP++P+ A        SDPSRV   NQ     +        P   +G++D YQQF   +  Q P   + QNQ    P +SR  +++  E+  NH
Subjt:  AAHLGPRFPLPAFAMPPVPGSDPSRVQPTNQANQMLNSVGTQHTIPPPVSGFSDSYQQFVSSNQMQFPATQRLQNQQPIQPDTSRPCTNRGPENFENH

AT2G20180.3 phytochrome interacting factor 3-like 56.2e-3247.98Show/hide
Query:  MKALQELIPRCNKTDKASMLDEAIEYLKALQLQVQMMSSMGCGMMPVMFPGIQQYLPPPMGMGIGMGMGMGMEMGMNRP-MMPFPNLLGGPN-LPMQAGA
        MKALQELIPRCNK+DKASMLDEAIEY+K+LQLQ+QMM SMGCGMMP+M+PG+QQY+P        M MGMGM   +  P  MPFPN+L     LP Q   
Subjt:  MKALQELIPRCNKTDKASMLDEAIEYLKALQLQVQMMSSMGCGMMPVMFPGIQQYLPPPMGMGIGMGMGMGMEMGMNRP-MMPFPNLLGGPN-LPMQAGA

Query:  AAHLGPRFPLPAFAMPPVPGSDPSRVQPTNQANQMLNSVGTQHTIPPPVSGFSDSYQQFVSSNQMQFPATQRLQNQQPIQPDTSRPCTNRGPENFENH
        A   GP++P+ A        SDPSRV   NQ     +        P   +G++D YQQF   +  Q P   + QNQ    P +SR  +++  E+  NH
Subjt:  AAHLGPRFPLPAFAMPPVPGSDPSRVQPTNQANQMLNSVGTQHTIPPPVSGFSDSYQQFVSSNQMQFPATQRLQNQQPIQPDTSRPCTNRGPENFENH

AT4G28800.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein3.5e-1936.55Show/hide
Query:  MKALQELIPRCNKTDKASMLDEAIEYLKALQLQVQMMSSMGCGMMPVMFPG-IQQYLPPPMGMGIGMGMGMGMEMGMNRPMMPFPNLLGGPNLPMQAGAA
        MK LQ+LIPRCNK+ K S LD+AIEY+K+LQ Q+Q M      M P+M  G  QQ++P            M M+M    P +PFP    G + PM A  A
Subjt:  MKALQELIPRCNKTDKASMLDEAIEYLKALQLQVQMMSSMGCGMMPVMFPG-IQQYLPPPMGMGIGMGMGMGMEMGMNRPMMPFPNLLGGPNLPMQAGAA

Query:  AHLGPRFPLPAFAMPPVPGSDPSRVQ-PTNQANQMLNSVGTQHTIPPPVSGFSDSYQQFVSSNQMQFPATQRLQNQQPIQPDTSRPCTNRGPENFEN
          +GP +P P +  P +   DPSRV+ P+ Q N + N         P    + + Y QF   +Q+Q P     Q Q   Q  + +  +++ PE+ EN
Subjt:  AHLGPRFPLPAFAMPPVPGSDPSRVQ-PTNQANQMLNSVGTQHTIPPPVSGFSDSYQQFVSSNQMQFPATQRLQNQQPIQPDTSRPCTNRGPENFEN

AT4G28811.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein4.9e-2142.19Show/hide
Query:  MKALQELIPRCNKTDKASMLDEAIEYLKALQLQVQMMSSMGCGMM-PVMFPGIQQYLPPPMGMGIGMGMGMGMEMGMNR--PMMPFPNLLGGPNLPMQAG
        MK LQEL+PRC KTDK SML++ IEY+K+LQLQ+QMM SMG GMM P+M  G  Q   P M MG+          GMNR  P +PFP    G   P + G
Subjt:  MKALQELIPRCNKTDKASMLDEAIEYLKALQLQVQMMSSMGCGMM-PVMFPGIQQYLPPPMGMGIGMGMGMGMEMGMNR--PMMPFPNLLGGPNLPMQAG

Query:  AAAHLGPRFPLPAFAMPPVPGSDPSRVQ-PTNQANQMLNSVGTQHTIPPPVSGFSDSYQQFVSSNQMQFPATQRLQNQQPIQPDTSRPCTNR
          A +GP +P   +  P    SD SRV  P+  +N + N         P    + + Y QFV  +QMQ P    LQ Q   QP  S   T++
Subjt:  AAAHLGPRFPLPAFAMPPVPGSDPSRVQ-PTNQANQMLNSVGTQHTIPPPVSGFSDSYQQFVSSNQMQFPATQRLQNQQPIQPDTSRPCTNR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGCTTTACAGGAACTCATACCTCGATGCAACAAGACAGATAAAGCTTCGATGTTGGACGAGGCGATCGAGTACTTGAAGGCGCTTCAGTTACAAGTGCAGATGAT
GTCGTCAATGGGGTGTGGGATGATGCCGGTGATGTTCCCAGGTATTCAGCAATACTTGCCGCCACCAATGGGGATGGGAATCGGGATGGGCATGGGCATGGGAATGGAAA
TGGGCATGAATAGACCTATGATGCCATTTCCTAATCTCCTGGGCGGTCCAAACTTGCCAATGCAAGCTGGAGCAGCAGCTCATTTGGGTCCAAGATTCCCTCTACCCGCC
TTTGCAATGCCTCCTGTTCCCGGTAGCGATCCATCCCGAGTACAACCGACGAATCAAGCCAATCAGATGCTTAACTCAGTCGGAACACAACATACAATCCCACCTCCAGT
CTCGGGTTTTTCTGATTCTTATCAGCAGTTTGTTAGCTCCAACCAAATGCAGTTTCCTGCGACACAGCGTCTACAGAATCAGCAACCGATTCAGCCGGATACGAGCAGGC
CATGTACTAACAGGGGTCCCGAAAACTTTGAAAATCACCAATCAGATTGTGATAGAAAGAAAGTCGAGTTACAGATGGTCATGGGGAATCTGTTGCTTTTACACGAAACT
AGTGTGTCGCATTGCATTGCATTGCGTTGGGGTCGGATCCGAGGTGAGGATGCTGATGGATCCAACTTGGTAACTTGGTGTGGTCGATTATTGTCGTCGTCATCTTCGGG
TGGTATCGAAGTATTCGAAACGCTCCAACTCCAGAGCCATTACCATTTTGCTCCTGGACCATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGCTTTACAGGAACTCATACCTCGATGCAACAAGACAGATAAAGCTTCGATGTTGGACGAGGCGATCGAGTACTTGAAGGCGCTTCAGTTACAAGTGCAGATGAT
GTCGTCAATGGGGTGTGGGATGATGCCGGTGATGTTCCCAGGTATTCAGCAATACTTGCCGCCACCAATGGGGATGGGAATCGGGATGGGCATGGGCATGGGAATGGAAA
TGGGCATGAATAGACCTATGATGCCATTTCCTAATCTCCTGGGCGGTCCAAACTTGCCAATGCAAGCTGGAGCAGCAGCTCATTTGGGTCCAAGATTCCCTCTACCCGCC
TTTGCAATGCCTCCTGTTCCCGGTAGCGATCCATCCCGAGTACAACCGACGAATCAAGCCAATCAGATGCTTAACTCAGTCGGAACACAACATACAATCCCACCTCCAGT
CTCGGGTTTTTCTGATTCTTATCAGCAGTTTGTTAGCTCCAACCAAATGCAGTTTCCTGCGACACAGCGTCTACAGAATCAGCAACCGATTCAGCCGGATACGAGCAGGC
CATGTACTAACAGGGGTCCCGAAAACTTTGAAAATCACCAATCAGATTGTGATAGAAAGAAAGTCGAGTTACAGATGGTCATGGGGAATCTGTTGCTTTTACACGAAACT
AGTGTGTCGCATTGCATTGCATTGCGTTGGGGTCGGATCCGAGGTGAGGATGCTGATGGATCCAACTTGGTAACTTGGTGTGGTCGATTATTGTCGTCGTCATCTTCGGG
TGGTATCGAAGTATTCGAAACGCTCCAACTCCAGAGCCATTACCATTTTGCTCCTGGACCATGA
Protein sequenceShow/hide protein sequence
MKALQELIPRCNKTDKASMLDEAIEYLKALQLQVQMMSSMGCGMMPVMFPGIQQYLPPPMGMGIGMGMGMGMEMGMNRPMMPFPNLLGGPNLPMQAGAAAHLGPRFPLPA
FAMPPVPGSDPSRVQPTNQANQMLNSVGTQHTIPPPVSGFSDSYQQFVSSNQMQFPATQRLQNQQPIQPDTSRPCTNRGPENFENHQSDCDRKKVELQMVMGNLLLLHET
SVSHCIALRWGRIRGEDADGSNLVTWCGRLLSSSSSGGIEVFETLQLQSHYHFAPGP