; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc09g00600 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g00600
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein At4g13200, chloroplastic
Genome locationchr9:596760..599328
RNA-Seq ExpressionMoc09g00600
SyntenyMoc09g00600
Gene Ontology termsGO:0010027 - thylakoid membrane organization (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
InterPro domainsIPR040003 - Plastoglobular protein 18-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139667.1 uncharacterized protein At4g13200, chloroplastic [Cucumis sativus]6.0e-5268.11Show/hide
Query:  SGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPGGFGSGDGDSRTVLDAFFLGKALAEALTERIES
        SG+ +SVS SPFSL+ TKPK TH+S P+L + RS STPSNLK RGI HF PN   R  ARC          SGDGDSRTVLDAFFLGKALAEALTERIES
Subjt:  SGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPGGFGSGDGDSRTVLDAFFLGKALAEALTERIES

Query:  TVGEVLSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTSTDPQQLSKPDPYSESTVNLDPPL
        T+GEVLSGIGRLQAE+QKQI DFQ+EVIERAK+AK+KAARDS EVQ P+S S+ SP I V S+     S PD  SES VN DP L
Subjt:  TVGEVLSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTSTDPQQLSKPDPYSESTVNLDPPL

XP_008447268.1 PREDICTED: uncharacterized protein At4g13200, chloroplastic isoform X1 [Cucumis melo]7.8e-5267.57Show/hide
Query:  SGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPGGFGSGDGDSRTVLDAFFLGKALAEALTERIES
        S I +SVS SPFSL+ TKPK TH+SSP+L   RS STPSNL+ RGI HF PN S R  ARC          SGDGDSRT+LDAFFLGKALAEALTERIES
Subjt:  SGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPGGFGSGDGDSRTVLDAFFLGKALAEALTERIES

Query:  TVGEVLSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTSTDPQQLSKPDPYSESTVNLDPPL
        T+GEVLSGIG+LQAE+QKQI DFQ+EVIERAK+AK+KAAR++ EVQ P+S S+ SPTI V+S+     S PD  SES VN DPPL
Subjt:  TVGEVLSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTSTDPQQLSKPDPYSESTVNLDPPL

XP_022154385.1 uncharacterized protein At4g13200, chloroplastic [Momordica charantia]6.1e-97100Show/hide
Query:  MSGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPGGFGSGDGDSRTVLDAFFLGKALAEALTERIE
        MSGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPGGFGSGDGDSRTVLDAFFLGKALAEALTERIE
Subjt:  MSGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPGGFGSGDGDSRTVLDAFFLGKALAEALTERIE

Query:  STVGEVLSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTSTDPQQLSKPDPYSESTVNLDPPLDVTNDEE
        STVGEVLSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTSTDPQQLSKPDPYSESTVNLDPPLDVTNDEE
Subjt:  STVGEVLSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTSTDPQQLSKPDPYSESTVNLDPPLDVTNDEE

XP_022953678.1 uncharacterized protein At4g13200, chloroplastic-like [Cucurbita moschata]1.3e-4159.9Show/hide
Query:  SGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPGGFGSGDGDSRTVLDAFFLGKALAEALTERIES
        SG+ +SVSSS FS++ TK K TH SSP+L   RS ST SNLK R      PN S R  A C          SGDGD+RTVLDAFF+GKA AE LTER+ES
Subjt:  SGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPGGFGSGDGDSRTVLDAFFLGKALAEALTERIES

Query:  TVGEVLSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVT-----STDPQQLSKPDPYSESTVNLDPPLDVTNDEE
        TVGEVL  IGRLQAERQ+QI+DFQEEVI+RAK+AK+KA RD+ E Q PIS SI S TI VT     S++ QQ S P+ YSE+ VN DPP     DEE
Subjt:  TVGEVLSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVT-----STDPQQLSKPDPYSESTVNLDPPLDVTNDEE

XP_038900031.1 uncharacterized protein At4g13200, chloroplastic [Benincasa hispida]2.1e-5772.11Show/hide
Query:  SGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPGGFGSGDGDSRTVLDAFFLGKALAEALTERIES
        SG+ +SVS SPFSL+ TKPK TH+SS +L + RS STPSNLK R I HF PN SPR  ARC          SGDGDSRTVLDAFFLGKALAEALTERIES
Subjt:  SGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPGGFGSGDGDSRTVLDAFFLGKALAEALTERIES

Query:  TVGEVLSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVT-----STDPQQLSKPDPYSESTVNLDPPL
        TVGEVLSGIGRLQAE+QKQI DFQEEVIERAK+AKDKAARD+ EVQ P+S SITSPTI VT     ST+ QQLS PD  SE+ VN DPPL
Subjt:  TVGEVLSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVT-----STDPQQLSKPDPYSESTVNLDPPL

TrEMBL top hitse value%identityAlignment
A0A0A0K6Q2 Uncharacterized protein2.9e-5268.11Show/hide
Query:  SGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPGGFGSGDGDSRTVLDAFFLGKALAEALTERIES
        SG+ +SVS SPFSL+ TKPK TH+S P+L + RS STPSNLK RGI HF PN   R  ARC          SGDGDSRTVLDAFFLGKALAEALTERIES
Subjt:  SGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPGGFGSGDGDSRTVLDAFFLGKALAEALTERIES

Query:  TVGEVLSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTSTDPQQLSKPDPYSESTVNLDPPL
        T+GEVLSGIGRLQAE+QKQI DFQ+EVIERAK+AK+KAARDS EVQ P+S S+ SP I V S+     S PD  SES VN DP L
Subjt:  TVGEVLSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTSTDPQQLSKPDPYSESTVNLDPPL

A0A1S3BHX5 uncharacterized protein At4g13200, chloroplastic isoform X13.8e-5267.57Show/hide
Query:  SGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPGGFGSGDGDSRTVLDAFFLGKALAEALTERIES
        S I +SVS SPFSL+ TKPK TH+SSP+L   RS STPSNL+ RGI HF PN S R  ARC          SGDGDSRT+LDAFFLGKALAEALTERIES
Subjt:  SGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPGGFGSGDGDSRTVLDAFFLGKALAEALTERIES

Query:  TVGEVLSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTSTDPQQLSKPDPYSESTVNLDPPL
        T+GEVLSGIG+LQAE+QKQI DFQ+EVIERAK+AK+KAAR++ EVQ P+S S+ SPTI V+S+     S PD  SES VN DPPL
Subjt:  TVGEVLSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTSTDPQQLSKPDPYSESTVNLDPPL

A0A6J1DJG4 uncharacterized protein At4g13200, chloroplastic3.0e-97100Show/hide
Query:  MSGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPGGFGSGDGDSRTVLDAFFLGKALAEALTERIE
        MSGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPGGFGSGDGDSRTVLDAFFLGKALAEALTERIE
Subjt:  MSGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPGGFGSGDGDSRTVLDAFFLGKALAEALTERIE

Query:  STVGEVLSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTSTDPQQLSKPDPYSESTVNLDPPLDVTNDEE
        STVGEVLSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTSTDPQQLSKPDPYSESTVNLDPPLDVTNDEE
Subjt:  STVGEVLSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTSTDPQQLSKPDPYSESTVNLDPPLDVTNDEE

A0A6J1GNZ1 uncharacterized protein At4g13200, chloroplastic-like6.1e-4259.9Show/hide
Query:  SGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPGGFGSGDGDSRTVLDAFFLGKALAEALTERIES
        SG+ +SVSSS FS++ TK K TH SSP+L   RS ST SNLK R      PN S R  A C          SGDGD+RTVLDAFF+GKA AE LTER+ES
Subjt:  SGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPGGFGSGDGDSRTVLDAFFLGKALAEALTERIES

Query:  TVGEVLSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVT-----STDPQQLSKPDPYSESTVNLDPPLDVTNDEE
        TVGEVL  IGRLQAERQ+QI+DFQEEVI+RAK+AK+KA RD+ E Q PIS SI S TI VT     S++ QQ S P+ YSE+ VN DPP     DEE
Subjt:  TVGEVLSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVT-----STDPQQLSKPDPYSESTVNLDPPLDVTNDEE

A0A6J1JX27 uncharacterized protein At4g13200, chloroplastic-like3.0e-4160.41Show/hide
Query:  SGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPGGFGSGDGDSRTVLDAFFLGKALAEALTERIES
        SG+ +SVS S FS+L T+ K TH SSP+L   RS ST SNLK R      PN S R  A C          SGDGD+RTVLDAFFLGKA AE LTER+ES
Subjt:  SGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPGGFGSGDGDSRTVLDAFFLGKALAEALTERIES

Query:  TVGEVLSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVT-----STDPQQLSKPDPYSESTVNLDPPLDVTNDEE
        TVGEVLS IGRLQAERQ+QI+DFQEEVIERAK+AK+KA RD+ E Q PIS SI S TI VT     S++ QQ S  + YSE+ VN DPP     DEE
Subjt:  TVGEVLSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVT-----STDPQQLSKPDPYSESTVNLDPPLDVTNDEE

SwissProt top hitse value%identityAlignment
Q8LDV3 Uncharacterized protein At4g13200, chloroplastic1.2e-1843.6Show/hide
Query:  SSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPGGFGSGDGDSRTVLDAFFLGKALAEALTERIESTVGEVLS
        S S FSL ++  + + HS   L  SRS      L+L          S R      S+    G  SG+ ++++VLDAFFLGKALAE + ERIESTVGEVLS
Subjt:  SSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPGGFGSGDGDSRTVLDAFFLGKALAEALTERIESTVGEVLS

Query:  GIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTSTDPQQLSKPDPYSESTV
         IG+ QAE+QKQ+ + QEEV+ERAK+AK++AAR+++E Q      + S  +A+T  +P  +      S STV
Subjt:  GIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTSTDPQQLSKPDPYSESTV

Arabidopsis top hitse value%identityAlignment
AT4G13200.1 unknown protein8.4e-2043.6Show/hide
Query:  SSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPGGFGSGDGDSRTVLDAFFLGKALAEALTERIESTVGEVLS
        S S FSL ++  + + HS   L  SRS      L+L          S R      S+    G  SG+ ++++VLDAFFLGKALAE + ERIESTVGEVLS
Subjt:  SSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPGGFGSGDGDSRTVLDAFFLGKALAEALTERIESTVGEVLS

Query:  GIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTSTDPQQLSKPDPYSESTV
         IG+ QAE+QKQ+ + QEEV+ERAK+AK++AAR+++E Q      + S  +A+T  +P  +      S STV
Subjt:  GIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTSTDPQQLSKPDPYSESTV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGGGATTCGAGCTTCAGTTTCCTCGTCCCCTTTTTCACTTTTGCACACTAAACCCAAATTTACCCACCATTCATCTCCAAATCTTGCTGTATCCCGCTCC
CCTTCCACTCCCTCAAATCTCAAGCTTCGAGGAATTCCACATTTTCCACCAAATTCCTCTCCCAGATCCAAAGCTCGTTGTTGCAGCAGCTCCGGCCCCGGTGGT
TTCGGCTCCGGTGATGGCGACAGTAGGACTGTTCTAGATGCCTTTTTCTTAGGGAAAGCTCTAGCAGAAGCCTTGACTGAGCGTATCGAGTCAACAGTTGGAGAG
GTTCTGAGTGGGATCGGGAGGCTGCAAGCTGAACGACAAAAACAAATTGTTGATTTCCAGGAGGAGGTGATAGAAAGAGCTAAGAGAGCCAAGGACAAAGCTGCA
CGTGATTCCATAGAAGTACAAGAACCCATCTCCCCCTCAATAACATCACCTACGATCGCAGTTACTTCGACTGATCCACAACAACTCTCGAAACCCGACCCATAT
TCAGAATCTACTGTGAACCTTGATCCTCCTCTCGATGTAACGAATGACGAAGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGGGATTCGAGCTTCAGTTTCCTCGTCCCCTTTTTCACTTTTGCACACTAAACCCAAATTTACCCACCATTCATCTCCAAATCTTGCTGTATCCCGCTCC
CCTTCCACTCCCTCAAATCTCAAGCTTCGAGGAATTCCACATTTTCCACCAAATTCCTCTCCCAGATCCAAAGCTCGTTGTTGCAGCAGCTCCGGCCCCGGTGGT
TTCGGCTCCGGTGATGGCGACAGTAGGACTGTTCTAGATGCCTTTTTCTTAGGGAAAGCTCTAGCAGAAGCCTTGACTGAGCGTATCGAGTCAACAGTTGGAGAG
GTTCTGAGTGGGATCGGGAGGCTGCAAGCTGAACGACAAAAACAAATTGTTGATTTCCAGGAGGAGGTGATAGAAAGAGCTAAGAGAGCCAAGGACAAAGCTGCA
CGTGATTCCATAGAAGTACAAGAACCCATCTCCCCCTCAATAACATCACCTACGATCGCAGTTACTTCGACTGATCCACAACAACTCTCGAAACCCGACCCATAT
TCAGAATCTACTGTGAACCTTGATCCTCCTCTCGATGTAACGAATGACGAAGAGTAA
Protein sequenceShow/hide protein sequence
MSGIRASVSSSPFSLLHTKPKFTHHSSPNLAVSRSPSTPSNLKLRGIPHFPPNSSPRSKARCCSSSGPGGFGSGDGDSRTVLDAFFLGKALAEALTERIESTVGE
VLSGIGRLQAERQKQIVDFQEEVIERAKRAKDKAARDSIEVQEPISPSITSPTIAVTSTDPQQLSKPDPYSESTVNLDPPLDVTNDEE