; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc09g00680 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g00680
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionribonuclease 1-like
Genome locationchr9:688717..695732
RNA-Seq ExpressionMoc09g00680
SyntenyMoc09g00680
Gene Ontology termsGO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0016020 - membrane (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0033897 - ribonuclease T2 activity (molecular function)
InterPro domainsIPR036430 - Ribonuclease T2-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN45018.2 hypothetical protein Csa_016393 [Cucumis sativus]2.2e-1874.24Show/hide
Query:  KNGFIKAIADVTSKKGGVICAADQRARTQLQKVVLCYSKDGATMIDCPDNFSSSCPDKFFWLALGD
        K  FI AIA+ T KKGGVICA DQ  R QLQK VLCY KDG T+IDCPDN SSSCPD F WLALGD
Subjt:  KNGFIKAIADVTSKKGGVICAADQRARTQLQKVVLCYSKDGATMIDCPDNFSSSCPDKFFWLALGD
XP_004149779.2 ribonuclease MC [Cucumis sativus]2.2e-1874.24Show/hide
Query:  KNGFIKAIADVTSKKGGVICAADQRARTQLQKVVLCYSKDGATMIDCPDNFSSSCPDKFFWLALGD
        K  FI AIA+ T KKGGVICA DQ  R QLQK VLCY KDG T+IDCPDN SSSCPD F WLALGD
Subjt:  KNGFIKAIADVTSKKGGVICAADQRARTQLQKVVLCYSKDGATMIDCPDNFSSSCPDKFFWLALGD
XP_022143591.1 ribonuclease 1-like [Momordica charantia]2.1e-2682.43Show/hide
Query:  PELRSAAHKNGFIKAIADVTSKKGGVICAADQRARTQLQKVVLCYSKDGATMIDCPDNFSSSCPDKFFWLALGD
        P      HK  FIKAIADVTSKKGGVICAADQR RTQL+ VVLCYSKDGATMIDCPDN SSSCPDKF WLALGD
Subjt:  PELRSAAHKNGFIKAIADVTSKKGGVICAADQRARTQLQKVVLCYSKDGATMIDCPDNFSSSCPDKFFWLALGD
XP_038899255.1 ribonuclease MC-like [Benincasa hispida]6.5e-2380.3Show/hide
Query:  KNGFIKAIADVTSKKGGVICAADQRARTQLQKVVLCYSKDGATMIDCPDNFSSSCPDKFFWLALGD
        K  F+KAIAD+TSKKGGVICA DQR RTQLQK VLCY+KDG T+IDCPDN SSSCPD F WLALGD
Subjt:  KNGFIKAIADVTSKKGGVICAADQRARTQLQKVVLCYSKDGATMIDCPDNFSSSCPDKFFWLALGD
TrEMBL top hitse value%identityAlignment
A0A0A0K4L1 Uncharacterized protein1.0e-1874.24Show/hide
Query:  KNGFIKAIADVTSKKGGVICAADQRARTQLQKVVLCYSKDGATMIDCPDNFSSSCPDKFFWLALGD
        K  FI AIA+ T KKGGVICA DQ  R QLQK VLCY KDG T+IDCPDN SSSCPD F WLALGD
Subjt:  KNGFIKAIADVTSKKGGVICAADQRARTQLQKVVLCYSKDGATMIDCPDNFSSSCPDKFFWLALGD
A0A6J1CQQ9 ribonuclease 1-like1.0e-2682.43Show/hide
Query:  PELRSAAHKNGFIKAIADVTSKKGGVICAADQRARTQLQKVVLCYSKDGATMIDCPDNFSSSCPDKFFWLALGD
        P      HK  FIKAIADVTSKKGGVICAADQR RTQL+ VVLCYSKDGATMIDCPDN SSSCPDKF WLALGD
Subjt:  PELRSAAHKNGFIKAIADVTSKKGGVICAADQRARTQLQKVVLCYSKDGATMIDCPDNFSSSCPDKFFWLALGD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGCGAAACTGTGTCGCCCGCGCATTGTGATTCCTACGCTTGTTTTGCGGGAATGTCATCTCCCGTTTTTCCCAACCACGTGTTCCCTCTCTCCCTACGATTCACG
CCTCCGATGGTGGAAGATTGAAGTTCTAAAAGATGACGGCGACACAACCAATGACAATATGGACGACGGCGGCACAACCGAAATCCATACCATTACGCTACACTATGGGT
TCCTGGATCCACTGGAAATAGAGGATAATGGCCCCCAAATCTTCCATATGCTTTGGCAGTATGGTCGACTTGAGTGGAGAATTTCATGCGCCTGCACGGGAACCGAAATT
TCACGAAGGTCACACTACTCAGTCTCCGATCTAATCTTAAGGGCAAAGCCTGGTGGAGTCGCCAAGCTGTCGCAACGTCATCGCAACGTCATCGCCAAGCTGTCGCCAAG
CGGCCGACGTCATCCCCAGAAGGGGCTTTTTCGAGATAAGAGTTTGGAGTCGCCACCAATCATCTACGAGGACTTGCTCGGCCGTGGTGTTCGACGAGTTCAAGTACTTC
TGCATGGGTTTGGATACATATGGCCGCCATGCTGTCCTGTCATTTCTGGTGCACGGTGGCCTGGTCCCGAGCTCCGCTCAGCTGCACACAAGAATGGCTTTATCAAAGCC
ATCGCCGACGTGACCTCGAAAAAGGGCGGCGTCATCTGCGCGGCCGACCAGCGGGCCCGAACACAGCTGCAGAAGGTCGTTTTGTGTTATAGTAAAGATGGTGCAACAAT
GATCGACTGCCCTGATAATTTCAGTAGTTCTTGCCCTGATAAGTTCTTCTGGCTTGCCTTGGGTGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGCGAAACTGTGTCGCCCGCGCATTGTGATTCCTACGCTTGTTTTGCGGGAATGTCATCTCCCGTTTTTCCCAACCACGTGTTCCCTCTCTCCCTACGATTCACG
CCTCCGATGGTGGAAGATTGAAGTTCTAAAAGATGACGGCGACACAACCAATGACAATATGGACGACGGCGGCACAACCGAAATCCATACCATTACGCTACACTATGGGT
TCCTGGATCCACTGGAAATAGAGGATAATGGCCCCCAAATCTTCCATATGCTTTGGCAGTATGGTCGACTTGAGTGGAGAATTTCATGCGCCTGCACGGGAACCGAAATT
TCACGAAGGTCACACTACTCAGTCTCCGATCTAATCTTAAGGGCAAAGCCTGGTGGAGTCGCCAAGCTGTCGCAACGTCATCGCAACGTCATCGCCAAGCTGTCGCCAAG
CGGCCGACGTCATCCCCAGAAGGGGCTTTTTCGAGATAAGAGTTTGGAGTCGCCACCAATCATCTACGAGGACTTGCTCGGCCGTGGTGTTCGACGAGTTCAAGTACTTC
TGCATGGGTTTGGATACATATGGCCGCCATGCTGTCCTGTCATTTCTGGTGCACGGTGGCCTGGTCCCGAGCTCCGCTCAGCTGCACACAAGAATGGCTTTATCAAAGCC
ATCGCCGACGTGACCTCGAAAAAGGGCGGCGTCATCTGCGCGGCCGACCAGCGGGCCCGAACACAGCTGCAGAAGGTCGTTTTGTGTTATAGTAAAGATGGTGCAACAAT
GATCGACTGCCCTGATAATTTCAGTAGTTCTTGCCCTGATAAGTTCTTCTGGCTTGCCTTGGGTGATTGA
Protein sequenceShow/hide protein sequence
MDAKLCRPRIVIPTLVLRECHLPFFPTTCSLSPYDSRLRWWKIEVLKDDGDTTNDNMDDGGTTEIHTITLHYGFLDPLEIEDNGPQIFHMLWQYGRLEWRISCACTGTEI
SRRSHYSVSDLILRAKPGGVAKLSQRHRNVIAKLSPSGRRHPQKGLFRDKSLESPPIIYEDLLGRGVRRVQVLLHGFGYIWPPCCPVISGARWPGPELRSAAHKNGFIKA
IADVTSKKGGVICAADQRARTQLQKVVLCYSKDGATMIDCPDNFSSSCPDKFFWLALGD