; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc09g00810 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g00810
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr9:779971..780669
RNA-Seq ExpressionMoc09g00810
SyntenyMoc09g00810
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144515.1 pentatricopeptide repeat-containing protein At5g48730, chloroplastic [Momordica charantia]3.9e-130100Show/hide
Query:  MESILMEMLSDDGCKPDVWTMNSTLRAFGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKAGSYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGR
        MESILMEMLSDDGCKPDVWTMNSTLRAFGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKAGSYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGR
Subjt:  MESILMEMLSDDGCKPDVWTMNSTLRAFGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKAGSYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGR

Query:  AGNLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDGVLRIVENSDITLDTVFFNCLVDAYGQMGCFAEMKNVVGMMEQRGCKPDKTTYRTLA
        AGNLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDGVLRIVENSDITLDTVFFNCLVDAYGQMGCFAEMKNVVGMMEQRGCKPDKTTYRTLA
Subjt:  AGNLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDGVLRIVENSDITLDTVFFNCLVDAYGQMGCFAEMKNVVGMMEQRGCKPDKTTYRTLA

Query:  RAYSDGGMGNHAREIQHLISSAEASKKTRPDL
        RAYSDGGMGNHAREIQHLISSAEASKKTRPDL
Subjt:  RAYSDGGMGNHAREIQHLISSAEASKKTRPDL

XP_022954169.1 pentatricopeptide repeat-containing protein At5g48730, chloroplastic [Cucurbita moschata]1.7e-11789.66Show/hide
Query:  MESILMEMLSDDGCKPDVWTMNSTLRAFGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKAGSYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGR
        MESIL+EMLSDDGCKPDVWTMNSTLR FGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKA SYEKMSAVMEYMQKYHYSWTIVTYN+VIDAFGR
Subjt:  MESILMEMLSDDGCKPDVWTMNSTLRAFGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKAGSYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGR

Query:  AGNLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDGVLRIVENSDITLDTVFFNCLVDAYGQMGCFAEMKNVVGMMEQRGCKPDKTTYRTLA
        AGNLKQME+LFRLMRSERI+PSCVTLCSLV+AYGQAGKR+KID VL IVENS+ITLDTVF+NCLVDAYG+M CFAEMK V+GMMEQRGCKPDKTTYR +A
Subjt:  AGNLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDGVLRIVENSDITLDTVFFNCLVDAYGQMGCFAEMKNVVGMMEQRGCKPDKTTYRTLA

Query:  RAYSDGGMGNHAREIQHLISSAEASKKTRPDL
        RAYSDGGM NHAREI  L+S+AEASK+TRPDL
Subjt:  RAYSDGGMGNHAREIQHLISSAEASKKTRPDL

XP_022991692.1 pentatricopeptide repeat-containing protein At5g48730, chloroplastic [Cucurbita maxima]1.9e-11688.79Show/hide
Query:  MESILMEMLSDDGCKPDVWTMNSTLRAFGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKAGSYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGR
        MESIL+EMLSDDGCKPDVWTMNSTLR FGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKA SYEKMSAVMEYMQKYHYSWTIVTYN+VIDAFGR
Subjt:  MESILMEMLSDDGCKPDVWTMNSTLRAFGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKAGSYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGR

Query:  AGNLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDGVLRIVENSDITLDTVFFNCLVDAYGQMGCFAEMKNVVGMMEQRGCKPDKTTYRTLA
        AGNLKQME+LFRLMRSERI+PSCVTLCSLV+AYGQAGKR+KI+ VL IVENS+ITLDTVF+NCLVDAYG+M CFAEMK V+GMMEQRGCKPDKTTYR +A
Subjt:  AGNLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDGVLRIVENSDITLDTVFFNCLVDAYGQMGCFAEMKNVVGMMEQRGCKPDKTTYRTLA

Query:  RAYSDGGMGNHAREIQHLISSAEASKKTRPDL
        RAYSDGGM NHAREI  L+ +AEASK+TRPDL
Subjt:  RAYSDGGMGNHAREIQHLISSAEASKKTRPDL

XP_023549189.1 pentatricopeptide repeat-containing protein At5g48730, chloroplastic [Cucurbita pepo subsp. pepo]1.7e-11789.66Show/hide
Query:  MESILMEMLSDDGCKPDVWTMNSTLRAFGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKAGSYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGR
        MESIL+EMLSDDGCKPDVWTMNSTLR FGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKA SYEKMSAVMEYMQKYHYSWTIVTYN+VIDAFGR
Subjt:  MESILMEMLSDDGCKPDVWTMNSTLRAFGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKAGSYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGR

Query:  AGNLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDGVLRIVENSDITLDTVFFNCLVDAYGQMGCFAEMKNVVGMMEQRGCKPDKTTYRTLA
        AGNLKQME+LFRLMRSERI+PSCVTLCSLV+AYGQAGKR+KID VL IVENS+ITLDTVF+NCLVDAYG+M CFAEMK V+GMMEQRGCKPDKTTYR +A
Subjt:  AGNLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDGVLRIVENSDITLDTVFFNCLVDAYGQMGCFAEMKNVVGMMEQRGCKPDKTTYRTLA

Query:  RAYSDGGMGNHAREIQHLISSAEASKKTRPDL
        RAYSDGGM NHAREI  L+S+AEASK+TRPDL
Subjt:  RAYSDGGMGNHAREIQHLISSAEASKKTRPDL

XP_038877300.1 pentatricopeptide repeat-containing protein At5g48730, chloroplastic [Benincasa hispida]1.7e-11790.09Show/hide
Query:  MESILMEMLSDDGCKPDVWTMNSTLRAFGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKAGSYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGR
        MESIL+EMLSDDGCKPDVWTMNSTLRAFGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKA SYEKMSAVMEYMQKYHYSWTIVTYN+VIDAFGR
Subjt:  MESILMEMLSDDGCKPDVWTMNSTLRAFGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKAGSYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGR

Query:  AGNLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDGVLRIVENSDITLDTVFFNCLVDAYGQMGCFAEMKNVVGMMEQRGCKPDKTTYRTLA
        AG+LKQME+LFRLMRSERIKPSCVTLCSLVRAYGQAGK EKID +L  VENSDI LDTVF+NCLVDAYG+M CFAEMK V+GMMEQRGCKPDKTTYRT+A
Subjt:  AGNLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDGVLRIVENSDITLDTVFFNCLVDAYGQMGCFAEMKNVVGMMEQRGCKPDKTTYRTLA

Query:  RAYSDGGMGNHAREIQHLISSAEASKKTRPDL
        RAYSDGGM  HA+EIQ LIS+AEASK+TRPDL
Subjt:  RAYSDGGMGNHAREIQHLISSAEASKKTRPDL

TrEMBL top hitse value%identityAlignment
A0A1S3C6D0 pentatricopeptide repeat-containing protein At5g48730, chloroplastic1.5e-11688.79Show/hide
Query:  MESILMEMLSDDGCKPDVWTMNSTLRAFGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKAGSYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGR
        MESIL+EMLSDDGCKPDVWTMNSTLRAFG SGQ+ETMEKCYEKFQ AGIQPNIQTFNILLDSYGKA SYEKMSAVMEYMQKYHYSWTIVTYN+VIDAFGR
Subjt:  MESILMEMLSDDGCKPDVWTMNSTLRAFGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKAGSYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGR

Query:  AGNLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDGVLRIVENSDITLDTVFFNCLVDAYGQMGCFAEMKNVVGMMEQRGCKPDKTTYRTLA
        AGNLKQME+LFRLMRSERIKPSCVTLCSLV+AYGQAGK EKI+ VL +VENSDI LDTVF+NCLVDAYG+M CFAEMK V+GMMEQRGCKPDKTTYRT+A
Subjt:  AGNLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDGVLRIVENSDITLDTVFFNCLVDAYGQMGCFAEMKNVVGMMEQRGCKPDKTTYRTLA

Query:  RAYSDGGMGNHAREIQHLISSAEASKKTRPDL
        RAYSDGGM NHA+EIQ LI++AEASK+TRPDL
Subjt:  RAYSDGGMGNHAREIQHLISSAEASKKTRPDL

A0A5A7SJF3 Pentatricopeptide repeat-containing protein1.5e-11688.79Show/hide
Query:  MESILMEMLSDDGCKPDVWTMNSTLRAFGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKAGSYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGR
        MESIL+EMLSDDGCKPDVWTMNSTLRAFG SGQ+ETMEKCYEKFQ AGIQPNIQTFNILLDSYGKA SYEKMSAVMEYMQKYHYSWTIVTYN+VIDAFGR
Subjt:  MESILMEMLSDDGCKPDVWTMNSTLRAFGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKAGSYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGR

Query:  AGNLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDGVLRIVENSDITLDTVFFNCLVDAYGQMGCFAEMKNVVGMMEQRGCKPDKTTYRTLA
        AGNLKQME+LFRLMRSERIKPSCVTLCSLV+AYGQAGK EKI+ VL +VENSDI LDTVF+NCLVDAYG+M CFAEMK V+GMMEQRGCKPDKTTYRT+A
Subjt:  AGNLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDGVLRIVENSDITLDTVFFNCLVDAYGQMGCFAEMKNVVGMMEQRGCKPDKTTYRTLA

Query:  RAYSDGGMGNHAREIQHLISSAEASKKTRPDL
        RAYSDGGM NHA+EIQ LI++AEASK+TRPDL
Subjt:  RAYSDGGMGNHAREIQHLISSAEASKKTRPDL

A0A6J1CRU5 pentatricopeptide repeat-containing protein At5g48730, chloroplastic1.9e-130100Show/hide
Query:  MESILMEMLSDDGCKPDVWTMNSTLRAFGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKAGSYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGR
        MESILMEMLSDDGCKPDVWTMNSTLRAFGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKAGSYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGR
Subjt:  MESILMEMLSDDGCKPDVWTMNSTLRAFGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKAGSYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGR

Query:  AGNLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDGVLRIVENSDITLDTVFFNCLVDAYGQMGCFAEMKNVVGMMEQRGCKPDKTTYRTLA
        AGNLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDGVLRIVENSDITLDTVFFNCLVDAYGQMGCFAEMKNVVGMMEQRGCKPDKTTYRTLA
Subjt:  AGNLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDGVLRIVENSDITLDTVFFNCLVDAYGQMGCFAEMKNVVGMMEQRGCKPDKTTYRTLA

Query:  RAYSDGGMGNHAREIQHLISSAEASKKTRPDL
        RAYSDGGMGNHAREIQHLISSAEASKKTRPDL
Subjt:  RAYSDGGMGNHAREIQHLISSAEASKKTRPDL

A0A6J1GS58 pentatricopeptide repeat-containing protein At5g48730, chloroplastic8.1e-11889.66Show/hide
Query:  MESILMEMLSDDGCKPDVWTMNSTLRAFGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKAGSYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGR
        MESIL+EMLSDDGCKPDVWTMNSTLR FGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKA SYEKMSAVMEYMQKYHYSWTIVTYN+VIDAFGR
Subjt:  MESILMEMLSDDGCKPDVWTMNSTLRAFGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKAGSYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGR

Query:  AGNLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDGVLRIVENSDITLDTVFFNCLVDAYGQMGCFAEMKNVVGMMEQRGCKPDKTTYRTLA
        AGNLKQME+LFRLMRSERI+PSCVTLCSLV+AYGQAGKR+KID VL IVENS+ITLDTVF+NCLVDAYG+M CFAEMK V+GMMEQRGCKPDKTTYR +A
Subjt:  AGNLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDGVLRIVENSDITLDTVFFNCLVDAYGQMGCFAEMKNVVGMMEQRGCKPDKTTYRTLA

Query:  RAYSDGGMGNHAREIQHLISSAEASKKTRPDL
        RAYSDGGM NHAREI  L+S+AEASK+TRPDL
Subjt:  RAYSDGGMGNHAREIQHLISSAEASKKTRPDL

A0A6J1JMJ6 pentatricopeptide repeat-containing protein At5g48730, chloroplastic9.0e-11788.79Show/hide
Query:  MESILMEMLSDDGCKPDVWTMNSTLRAFGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKAGSYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGR
        MESIL+EMLSDDGCKPDVWTMNSTLR FGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKA SYEKMSAVMEYMQKYHYSWTIVTYN+VIDAFGR
Subjt:  MESILMEMLSDDGCKPDVWTMNSTLRAFGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKAGSYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGR

Query:  AGNLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDGVLRIVENSDITLDTVFFNCLVDAYGQMGCFAEMKNVVGMMEQRGCKPDKTTYRTLA
        AGNLKQME+LFRLMRSERI+PSCVTLCSLV+AYGQAGKR+KI+ VL IVENS+ITLDTVF+NCLVDAYG+M CFAEMK V+GMMEQRGCKPDKTTYR +A
Subjt:  AGNLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDGVLRIVENSDITLDTVFFNCLVDAYGQMGCFAEMKNVVGMMEQRGCKPDKTTYRTLA

Query:  RAYSDGGMGNHAREIQHLISSAEASKKTRPDL
        RAYSDGGM NHAREI  L+ +AEASK+TRPDL
Subjt:  RAYSDGGMGNHAREIQHLISSAEASKKTRPDL

SwissProt top hitse value%identityAlignment
O82178 Pentatricopeptide repeat-containing protein At2g351307.8e-2528.31Show/hide
Query:  CKPDVWTMNSTLRAFGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKAGSYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGNLKQMEYLFRL
        CKP++ T  + + AF   G  E  E+ +E+ Q  G++P++  +N L++SY +AG     + +   MQ         +YN+++DA+GRAG     E +F  
Subjt:  CKPDVWTMNSTLRAFGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKAGSYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGNLKQMEYLFRL

Query:  MRSERIKPSCVTLCSLVRAYGQAGKREKIDGVLRIVENSDITLDTVFFNCLVDAYGQMGCFAEMKNVVGMMEQRGCKPDKTTYRTLARAYSDGGMGNHAR
        M+   I P+  +   L+ AY +A    K + +++ +  + +  DT   N +++ YG++G F +M+ ++  ME   C  D +TY  L   Y   G      
Subjt:  MRSERIKPSCVTLCSLVRAYGQAGKREKIDGVLRIVENSDITLDTVFFNCLVDAYGQMGCFAEMKNVVGMMEQRGCKPDKTTYRTLARAYSDGGMGNHAR

Query:  EIQHLISSAEASKKTRPDL
         I+ L    +  K  RPD+
Subjt:  EIQHLISSAEASKKTRPDL

Q9FKC3 Pentatricopeptide repeat-containing protein At5g48730, chloroplastic3.5e-9473.76Show/hide
Query:  MESILMEMLSDDGCKPDVWTMNSTLRAFGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKAGSYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGR
        MES L++ML +D CKPD WTMNSTLRAFG +GQ+E ME CYEKFQ +GI+PNI+TFNILLDSYGK+G+Y+KMSAVMEYMQKYHYSWTIVTYNVVIDAFGR
Subjt:  MESILMEMLSDDGCKPDVWTMNSTLRAFGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKAGSYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGR

Query:  AGNLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDGVLRIVENSDITLDTVFFNCLVDAYGQMGCFAEMKNVVGMMEQRGCKPDKTTYRTLA
        AG+LKQMEYLFRLM+SERI PSCVTLCSLVRAYG+A K +KI GVLR +ENSDI LD VFFNCLVDAYG+M  FAEMK V+ +ME++G KPDK TYRT+ 
Subjt:  AGNLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDGVLRIVENSDITLDTVFFNCLVDAYGQMGCFAEMKNVVGMMEQRGCKPDKTTYRTLA

Query:  RAYSDGGMGNHAREIQHLISS
        +AY   GM  H +E+  ++ S
Subjt:  RAYSDGGMGNHAREIQHLISS

Q9S7Q2 Pentatricopeptide repeat-containing protein At1g74850, chloroplastic3.6e-2226.07Show/hide
Query:  LMEMLSDDGCKPDVWTMNSTLRAFGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKAGSYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGNL
        L+  ++  G  PD+ + N  L A+  SG ++     + + Q AG  PN  T+++LL+ +G++G Y+ +  +   M+  +      TYN++I+ FG  G  
Subjt:  LMEMLSDDGCKPDVWTMNSTLRAFGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKAGSYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGNL

Query:  KQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDGVLRIVENSDITLDTVFFNCLVDAYGQMGCFAEMKNVVGMMEQRGCKPDKTTYRTLARAYS
        K++  LF  M  E I+P   T   ++ A G+ G  E    +L+ +  +DI   +  +  +++A+GQ   + E       M + G  P   T+ +L  +++
Subjt:  KQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDGVLRIVENSDITLDTVFFNCLVDAYGQMGCFAEMKNVVGMMEQRGCKPDKTTYRTLARAYS

Query:  DGGMGNHAREI
         GG+   +  I
Subjt:  DGGMGNHAREI

Q9SCP4 Pentatricopeptide repeat-containing protein At3g531707.0e-5847.77Show/hide
Query:  MESILMEMLSDDGCKPDVWTMNSTLRAFGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKAGSYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGR
        MES+L +M+ D    PDV T+NS + ++G+   +  ME  Y +FQ  G+QP+I TFNIL+ S+GKAG Y+KM +VM++M+K  +S T VTYN+VI+ FG+
Subjt:  MESILMEMLSDDGCKPDVWTMNSTLRAFGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKAGSYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGR

Query:  AGNLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDGVLRIVENSDITLDTVFFNCLVDAYGQMGCFAEMKNVVGMMEQRGCKPDKTTYRTLA
        AG +++M+ +FR M+ + +KP+ +T CSLV AY +AG   KID VLR + NSD+ LDT FFNC+++AYGQ G  A MK +   ME+R CKPDK T+ T+ 
Subjt:  AGNLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDGVLRIVENSDITLDTVFFNCLVDAYGQMGCFAEMKNVVGMMEQRGCKPDKTTYRTLA

Query:  RAYSDGGMGNHAREIQ-HLISSAE
        + Y+  G+ +  +E++  +ISS E
Subjt:  RAYSDGGMGNHAREIQ-HLISSAE

Q9SQU6 Pentatricopeptide repeat-containing protein At3g06430, chloroplastic3.0e-4540.26Show/hide
Query:  MESILMEMLSDDGCKPDVWTMNSTLRAFGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKAGSYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGR
        ME +L +ML    CKPDVWTMN  L  FG+ G+++ ME  YEKF+  GI+P  +TFNIL+ SYGK   Y+KMS+VMEYM+K  + WT  TYN +I+AF  
Subjt:  MESILMEMLSDDGCKPDVWTMNSTLRAFGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKAGSYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGR

Query:  AGNLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDGVLRIVENSDITLDTVFFNCLVDAYGQMGCFAEMKNVVGMMEQRGCKPDKTTYRTLA
         G+ K ME  F  MRSE +K    T C L+  Y  AG   K+   +++    +I  +T F+N ++ A  +     EM+ V   M++R C  D  T+  + 
Subjt:  AGNLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDGVLRIVENSDITLDTVFFNCLVDAYGQMGCFAEMKNVVGMMEQRGCKPDKTTYRTLA

Query:  RAYSDGGMGNH----AREIQHLISSAEASKK
         AY   GM +      +E Q L+    A+K+
Subjt:  RAYSDGGMGNH----AREIQHLISSAEASKK

Arabidopsis top hitse value%identityAlignment
AT2G35130.1 Tetratricopeptide repeat (TPR)-like superfamily protein5.5e-2628.31Show/hide
Query:  CKPDVWTMNSTLRAFGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKAGSYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGNLKQMEYLFRL
        CKP++ T  + + AF   G  E  E+ +E+ Q  G++P++  +N L++SY +AG     + +   MQ         +YN+++DA+GRAG     E +F  
Subjt:  CKPDVWTMNSTLRAFGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKAGSYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGNLKQMEYLFRL

Query:  MRSERIKPSCVTLCSLVRAYGQAGKREKIDGVLRIVENSDITLDTVFFNCLVDAYGQMGCFAEMKNVVGMMEQRGCKPDKTTYRTLARAYSDGGMGNHAR
        M+   I P+  +   L+ AY +A    K + +++ +  + +  DT   N +++ YG++G F +M+ ++  ME   C  D +TY  L   Y   G      
Subjt:  MRSERIKPSCVTLCSLVRAYGQAGKREKIDGVLRIVENSDITLDTVFFNCLVDAYGQMGCFAEMKNVVGMMEQRGCKPDKTTYRTLARAYSDGGMGNHAR

Query:  EIQHLISSAEASKKTRPDL
         I+ L    +  K  RPD+
Subjt:  EIQHLISSAEASKKTRPDL

AT2G35130.2 Tetratricopeptide repeat (TPR)-like superfamily protein5.5e-2628.31Show/hide
Query:  CKPDVWTMNSTLRAFGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKAGSYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGNLKQMEYLFRL
        CKP++ T  + + AF   G  E  E+ +E+ Q  G++P++  +N L++SY +AG     + +   MQ         +YN+++DA+GRAG     E +F  
Subjt:  CKPDVWTMNSTLRAFGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKAGSYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGNLKQMEYLFRL

Query:  MRSERIKPSCVTLCSLVRAYGQAGKREKIDGVLRIVENSDITLDTVFFNCLVDAYGQMGCFAEMKNVVGMMEQRGCKPDKTTYRTLARAYSDGGMGNHAR
        M+   I P+  +   L+ AY +A    K + +++ +  + +  DT   N +++ YG++G F +M+ ++  ME   C  D +TY  L   Y   G      
Subjt:  MRSERIKPSCVTLCSLVRAYGQAGKREKIDGVLRIVENSDITLDTVFFNCLVDAYGQMGCFAEMKNVVGMMEQRGCKPDKTTYRTLARAYSDGGMGNHAR

Query:  EIQHLISSAEASKKTRPDL
         I+ L    +  K  RPD+
Subjt:  EIQHLISSAEASKKTRPDL

AT3G06430.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.2e-4640.26Show/hide
Query:  MESILMEMLSDDGCKPDVWTMNSTLRAFGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKAGSYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGR
        ME +L +ML    CKPDVWTMN  L  FG+ G+++ ME  YEKF+  GI+P  +TFNIL+ SYGK   Y+KMS+VMEYM+K  + WT  TYN +I+AF  
Subjt:  MESILMEMLSDDGCKPDVWTMNSTLRAFGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKAGSYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGR

Query:  AGNLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDGVLRIVENSDITLDTVFFNCLVDAYGQMGCFAEMKNVVGMMEQRGCKPDKTTYRTLA
         G+ K ME  F  MRSE +K    T C L+  Y  AG   K+   +++    +I  +T F+N ++ A  +     EM+ V   M++R C  D  T+  + 
Subjt:  AGNLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDGVLRIVENSDITLDTVFFNCLVDAYGQMGCFAEMKNVVGMMEQRGCKPDKTTYRTLA

Query:  RAYSDGGMGNH----AREIQHLISSAEASKK
         AY   GM +      +E Q L+    A+K+
Subjt:  RAYSDGGMGNH----AREIQHLISSAEASKK

AT3G53170.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.7e-5946.7Show/hide
Query:  MESILMEMLSDDGCKPDVWTMNSTLRAFGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKAGSYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGR
        MES+L +M+ D    PDV T+NS + ++G+   +  ME  Y +FQ  G+QP+I TFNIL+ S+GKAG Y+KM +VM++M+K  +S T VTYN+VI+ FG+
Subjt:  MESILMEMLSDDGCKPDVWTMNSTLRAFGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKAGSYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGR

Query:  AGNLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDGVLRIVENSDITLDTVFFNCLVDAYGQMGCFAEMKNVVGMMEQRGCKPDKTTYRTLA
        AG +++M+ +FR M+ + +KP+ +T CSLV AY +AG   KID VLR + NSD+ LDT FFNC+++AYGQ G  A MK +   ME+R CKPDK T+ T+ 
Subjt:  AGNLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDGVLRIVENSDITLDTVFFNCLVDAYGQMGCFAEMKNVVGMMEQRGCKPDKTTYRTLA

Query:  RAYSDGGMGNHAREIQHLISSAEASKK
        + Y+  G+ +  +E++  + S++  KK
Subjt:  RAYSDGGMGNHAREIQHLISSAEASKK

AT5G48730.1 Pentatricopeptide repeat (PPR) superfamily protein2.5e-9573.76Show/hide
Query:  MESILMEMLSDDGCKPDVWTMNSTLRAFGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKAGSYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGR
        MES L++ML +D CKPD WTMNSTLRAFG +GQ+E ME CYEKFQ +GI+PNI+TFNILLDSYGK+G+Y+KMSAVMEYMQKYHYSWTIVTYNVVIDAFGR
Subjt:  MESILMEMLSDDGCKPDVWTMNSTLRAFGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKAGSYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGR

Query:  AGNLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDGVLRIVENSDITLDTVFFNCLVDAYGQMGCFAEMKNVVGMMEQRGCKPDKTTYRTLA
        AG+LKQMEYLFRLM+SERI PSCVTLCSLVRAYG+A K +KI GVLR +ENSDI LD VFFNCLVDAYG+M  FAEMK V+ +ME++G KPDK TYRT+ 
Subjt:  AGNLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDGVLRIVENSDITLDTVFFNCLVDAYGQMGCFAEMKNVVGMMEQRGCKPDKTTYRTLA

Query:  RAYSDGGMGNHAREIQHLISS
        +AY   GM  H +E+  ++ S
Subjt:  RAYSDGGMGNHAREIQHLISS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCTATATTGATGGAAATGCTGAGTGATGATGGCTGTAAGCCTGACGTTTGGACCATGAACTCGACGCTTCGAGCCTTCGGCAGTAGCGGACAATTGGAAACCAT
GGAGAAGTGCTATGAAAAGTTTCAGGGTGCTGGAATCCAACCAAACATTCAGACCTTCAACATCCTTCTGGATTCATATGGCAAGGCTGGAAGTTATGAGAAAATGAGTG
CTGTGATGGAGTATATGCAGAAGTACCATTATTCATGGACAATTGTAACGTACAATGTCGTAATCGACGCCTTCGGGAGGGCTGGGAATTTGAAACAGATGGAGTATCTG
TTTAGGCTCATGAGATCAGAGAGGATCAAACCGAGTTGTGTAACACTCTGCTCACTCGTGAGGGCATACGGCCAAGCGGGAAAACGTGAAAAAATTGATGGTGTACTGCG
TATTGTAGAGAATTCCGATATAACGTTGGATACCGTTTTTTTCAACTGTCTTGTGGATGCTTACGGGCAGATGGGATGTTTTGCGGAGATGAAGAACGTGGTCGGGATGA
TGGAGCAGAGAGGATGCAAGCCTGATAAGACTACATACAGGACCTTGGCTAGAGCTTATTCAGATGGTGGAATGGGAAACCATGCCAGGGAAATCCAACATCTTATAAGC
TCAGCAGAAGCAAGTAAGAAAACCCGACCAGACTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTCTATATTGATGGAAATGCTGAGTGATGATGGCTGTAAGCCTGACGTTTGGACCATGAACTCGACGCTTCGAGCCTTCGGCAGTAGCGGACAATTGGAAACCAT
GGAGAAGTGCTATGAAAAGTTTCAGGGTGCTGGAATCCAACCAAACATTCAGACCTTCAACATCCTTCTGGATTCATATGGCAAGGCTGGAAGTTATGAGAAAATGAGTG
CTGTGATGGAGTATATGCAGAAGTACCATTATTCATGGACAATTGTAACGTACAATGTCGTAATCGACGCCTTCGGGAGGGCTGGGAATTTGAAACAGATGGAGTATCTG
TTTAGGCTCATGAGATCAGAGAGGATCAAACCGAGTTGTGTAACACTCTGCTCACTCGTGAGGGCATACGGCCAAGCGGGAAAACGTGAAAAAATTGATGGTGTACTGCG
TATTGTAGAGAATTCCGATATAACGTTGGATACCGTTTTTTTCAACTGTCTTGTGGATGCTTACGGGCAGATGGGATGTTTTGCGGAGATGAAGAACGTGGTCGGGATGA
TGGAGCAGAGAGGATGCAAGCCTGATAAGACTACATACAGGACCTTGGCTAGAGCTTATTCAGATGGTGGAATGGGAAACCATGCCAGGGAAATCCAACATCTTATAAGC
TCAGCAGAAGCAAGTAAGAAAACCCGACCAGACTTGTGA
Protein sequenceShow/hide protein sequence
MESILMEMLSDDGCKPDVWTMNSTLRAFGSSGQLETMEKCYEKFQGAGIQPNIQTFNILLDSYGKAGSYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGNLKQMEYL
FRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDGVLRIVENSDITLDTVFFNCLVDAYGQMGCFAEMKNVVGMMEQRGCKPDKTTYRTLARAYSDGGMGNHAREIQHLIS
SAEASKKTRPDL