; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc09g02530 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g02530
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionTRAM domain-containing protein
Genome locationchr9:2056127..2056486
RNA-Seq ExpressionMoc09g02530
SyntenyMoc09g02530
Gene Ontology termsGO:0030488 - tRNA methylation (biological process)
GO:0030696 - tRNA (m5U54) methyltransferase activity (molecular function)
InterPro domainsIPR010280 - (Uracil-5)-methyltransferase family
IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059451.1 putative RNA methyltransferase BT_0643 isoform X1 [Cucumis melo var. makuwa]1.7e-3387.06Show/hide
Query:  DLNRPGMHMKLIKFLLKIKAPLIVYVSCNPATRACHLDYLCHGVVEQGIKCCYKLKSLQPVDMFPHT-HIECVCLLELIPDSQMG
        D NRPGMHMKLIKFLLKIK P IVYVSCNPAT A  LDYLCHGVVE+GIK CY LKSLQPVDMFPHT HIECVCLLEL PDSQMG
Subjt:  DLNRPGMHMKLIKFLLKIKAPLIVYVSCNPATRACHLDYLCHGVVEQGIKCCYKLKSLQPVDMFPHT-HIECVCLLELIPDSQMG

XP_008462378.1 PREDICTED: uncharacterized RNA methyltransferase BT_0643 isoform X1 [Cucumis melo]1.7e-3387.06Show/hide
Query:  DLNRPGMHMKLIKFLLKIKAPLIVYVSCNPATRACHLDYLCHGVVEQGIKCCYKLKSLQPVDMFPHT-HIECVCLLELIPDSQMG
        D NRPGMHMKLIKFLLKIK P IVYVSCNPAT A  LDYLCHGVVE+GIK CY LKSLQPVDMFPHT HIECVCLLEL PDSQMG
Subjt:  DLNRPGMHMKLIKFLLKIKAPLIVYVSCNPATRACHLDYLCHGVVEQGIKCCYKLKSLQPVDMFPHT-HIECVCLLELIPDSQMG

XP_008462379.1 PREDICTED: uncharacterized RNA methyltransferase BT_0643 isoform X2 [Cucumis melo]1.7e-3387.06Show/hide
Query:  DLNRPGMHMKLIKFLLKIKAPLIVYVSCNPATRACHLDYLCHGVVEQGIKCCYKLKSLQPVDMFPHT-HIECVCLLELIPDSQMG
        D NRPGMHMKLIKFLLKIK P IVYVSCNPAT A  LDYLCHGVVE+GIK CY LKSLQPVDMFPHT HIECVCLLEL PDSQMG
Subjt:  DLNRPGMHMKLIKFLLKIKAPLIVYVSCNPATRACHLDYLCHGVVEQGIKCCYKLKSLQPVDMFPHT-HIECVCLLELIPDSQMG

XP_022154722.1 uncharacterized protein LOC111021905 [Momordica charantia]1.1e-3589.53Show/hide
Query:  DLNRPGMHMKLIKFLLKIKAPLIVYVSCNPATRACHLDYLCHGVVEQGIKCCYKLKSLQPVDMFPHT-HIECVCLLELIPDSQMGP
        D NRPGMHMKLIKFLLKIKAP IVYVSCNPAT A  LDYLCHGVV+QGIK CYKLKSLQPVDMFPHT HIECVCLLELIPDSQ+GP
Subjt:  DLNRPGMHMKLIKFLLKIKAPLIVYVSCNPATRACHLDYLCHGVVEQGIKCCYKLKSLQPVDMFPHT-HIECVCLLELIPDSQMGP

XP_038900161.1 LOW QUALITY PROTEIN: uncharacterized RNA methyltransferase BH0687 [Benincasa hispida]2.7e-3489.41Show/hide
Query:  DLNRPGMHMKLIKFLLKIKAPLIVYVSCNPATRACHLDYLCHGVVEQGIKCCYKLKSLQPVDMFPHT-HIECVCLLELIPDSQMG
        D NRPGMHMKLIKFLLKIKAP IVYVSCNPAT A  LDYLCHGVVEQGIK CY LKSLQPVDMFPHT HIECVCLLEL PDSQMG
Subjt:  DLNRPGMHMKLIKFLLKIKAPLIVYVSCNPATRACHLDYLCHGVVEQGIKCCYKLKSLQPVDMFPHT-HIECVCLLELIPDSQMG

TrEMBL top hitse value%identityAlignment
A0A0A0KB04 TRAM domain-containing protein8.4e-3487.06Show/hide
Query:  DLNRPGMHMKLIKFLLKIKAPLIVYVSCNPATRACHLDYLCHGVVEQGIKCCYKLKSLQPVDMFPHT-HIECVCLLELIPDSQMG
        D NRPGMHMKLIKFLLKIK P IVYVSCNPAT A  LDYLCHGVVE+GIK CY LKSLQPVDMFPHT HIECVCLLEL PDSQMG
Subjt:  DLNRPGMHMKLIKFLLKIKAPLIVYVSCNPATRACHLDYLCHGVVEQGIKCCYKLKSLQPVDMFPHT-HIECVCLLELIPDSQMG

A0A1S3CGT1 uncharacterized RNA methyltransferase BT_0643 isoform X28.4e-3487.06Show/hide
Query:  DLNRPGMHMKLIKFLLKIKAPLIVYVSCNPATRACHLDYLCHGVVEQGIKCCYKLKSLQPVDMFPHT-HIECVCLLELIPDSQMG
        D NRPGMHMKLIKFLLKIK P IVYVSCNPAT A  LDYLCHGVVE+GIK CY LKSLQPVDMFPHT HIECVCLLEL PDSQMG
Subjt:  DLNRPGMHMKLIKFLLKIKAPLIVYVSCNPATRACHLDYLCHGVVEQGIKCCYKLKSLQPVDMFPHT-HIECVCLLELIPDSQMG

A0A1S3CGW1 uncharacterized RNA methyltransferase BT_0643 isoform X18.4e-3487.06Show/hide
Query:  DLNRPGMHMKLIKFLLKIKAPLIVYVSCNPATRACHLDYLCHGVVEQGIKCCYKLKSLQPVDMFPHT-HIECVCLLELIPDSQMG
        D NRPGMHMKLIKFLLKIK P IVYVSCNPAT A  LDYLCHGVVE+GIK CY LKSLQPVDMFPHT HIECVCLLEL PDSQMG
Subjt:  DLNRPGMHMKLIKFLLKIKAPLIVYVSCNPATRACHLDYLCHGVVEQGIKCCYKLKSLQPVDMFPHT-HIECVCLLELIPDSQMG

A0A5D3BVW7 Putative RNA methyltransferase BT_0643 isoform X18.4e-3487.06Show/hide
Query:  DLNRPGMHMKLIKFLLKIKAPLIVYVSCNPATRACHLDYLCHGVVEQGIKCCYKLKSLQPVDMFPHT-HIECVCLLELIPDSQMG
        D NRPGMHMKLIKFLLKIK P IVYVSCNPAT A  LDYLCHGVVE+GIK CY LKSLQPVDMFPHT HIECVCLLEL PDSQMG
Subjt:  DLNRPGMHMKLIKFLLKIKAPLIVYVSCNPATRACHLDYLCHGVVEQGIKCCYKLKSLQPVDMFPHT-HIECVCLLELIPDSQMG

A0A6J1DME4 uncharacterized protein LOC1110219055.3e-3689.53Show/hide
Query:  DLNRPGMHMKLIKFLLKIKAPLIVYVSCNPATRACHLDYLCHGVVEQGIKCCYKLKSLQPVDMFPHT-HIECVCLLELIPDSQMGP
        D NRPGMHMKLIKFLLKIKAP IVYVSCNPAT A  LDYLCHGVV+QGIK CYKLKSLQPVDMFPHT HIECVCLLELIPDSQ+GP
Subjt:  DLNRPGMHMKLIKFLLKIKAPLIVYVSCNPATRACHLDYLCHGVVEQGIKCCYKLKSLQPVDMFPHT-HIECVCLLELIPDSQMGP

SwissProt top hitse value%identityAlignment
P55137 Uncharacterized RNA methyltransferase CT_7428.2e-1044.87Show/hide
Query:  VDLNRPGMHMKLIKFLLKIKAPLIVYVSCNPATRACHLDYLCHGVVEQGIKCCYKLKSLQPVDMFPHT-HIECVCLLE
        +D  R GM  + +K+LL++    IVYVSCNP T+       C  +VEQG    Y+L+ +QP+D FPHT H+E + LLE
Subjt:  VDLNRPGMHMKLIKFLLKIKAPLIVYVSCNPATRACHLDYLCHGVVEQGIKCCYKLKSLQPVDMFPHT-HIECVCLLE

P58106 Uncharacterized RNA methyltransferase TC_01181.1e-0944.87Show/hide
Query:  VDLNRPGMHMKLIKFLLKIKAPLIVYVSCNPATRACHLDYLCHGVVEQGIKCCYKLKSLQPVDMFPHT-HIECVCLLE
        +D  R GM  K +K+LL++    I+YVSCNP T+       C  +VE G    Y+L+ +QP+D FPHT H+E V LLE
Subjt:  VDLNRPGMHMKLIKFLLKIKAPLIVYVSCNPATRACHLDYLCHGVVEQGIKCCYKLKSLQPVDMFPHT-HIECVCLLE

Q814A6 Uncharacterized RNA methyltransferase BC_03646.3e-1045.78Show/hide
Query:  TYDVDLNRPGMHMKLIKFLLKIKAPLIVYVSCNPATRACHLDYLCHGVVEQGIKCCYKLKSLQPVDMFPH-THIECVCLLELI
        T  VD  R G    L+  ++ +K   +VYVSCNPAT A  L      V+E+G    YK + +QPVDMFPH TH+ECV  L+L+
Subjt:  TYDVDLNRPGMHMKLIKFLLKIKAPLIVYVSCNPATRACHLDYLCHGVVEQGIKCCYKLKSLQPVDMFPH-THIECVCLLELI

Q8AA22 Uncharacterized RNA methyltransferase BT_06438.2e-1048.72Show/hide
Query:  DLNRPGMHMKLIKFLLKIKAPLIVYVSCNPATRACHLDYLCHGVVEQGIKCCYKLKSLQPVDMFPHT-HIECVCLLEL
        D  R GMH  ++  +L  +   IVYVSCNPAT+A  L         Q +   YK+K++QPVDMFPHT H+E V LLEL
Subjt:  DLNRPGMHMKLIKFLLKIKAPLIVYVSCNPATRACHLDYLCHGVVEQGIKCCYKLKSLQPVDMFPHT-HIECVCLLEL

Q9Z721 Uncharacterized RNA methyltransferase CPn_0885/CP_0981/CPj0885/CpB09141.1e-0941.03Show/hide
Query:  VDLNRPGMHMKLIKFLLKIKAPLIVYVSCNPATRACHLDYLCHGVVEQGIKCCYKLKSLQPVDMFPH-THIECVCLLE
        +D  R GM  K++K++L+I +P IVY+SCNP T+       C  ++  G    Y++K +QP+D FP+ TH+E + LLE
Subjt:  VDLNRPGMHMKLIKFLLKIKAPLIVYVSCNPATRACHLDYLCHGVVEQGIKCCYKLKSLQPVDMFPH-THIECVCLLE

Arabidopsis top hitse value%identityAlignment
AT3G21300.1 RNA methyltransferase family protein3.0e-3179.49Show/hide
Query:  DLNRPGMHMKLIKFLLKIKAPLIVYVSCNPATRACHLDYLCHGVVEQGIKCCYKLKSLQPVDMFPHT-HIECVCLLEL
        D NRPGMHMKLIKFLLK+K+P I+YVSCNPAT A  LDYLCHGV E+ +K CYKL S+QPVDMFPHT HIECVCLLEL
Subjt:  DLNRPGMHMKLIKFLLKIKAPLIVYVSCNPATRACHLDYLCHGVVEQGIKCCYKLKSLQPVDMFPHT-HIECVCLLEL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGCAACATATGATGTAGATTTGAACCGTCCAGGTATGCACATGAAGTTGATTAAGTTCCTTCTCAAAATCAAGGCACCTTTAATAGTTTATGTATCATGTAATCC
TGCAACCCGTGCTTGCCATCTTGATTATCTCTGCCACGGCGTGGTGGAGCAAGGCATTAAATGTTGTTACAAACTGAAGAGCTTACAGCCAGTAGATATGTTCCCCCACA
CTCATATTGAATGTGTTTGCCTACTGGAACTCATTCCTGATTCCCAGATGGGACCATGA
mRNA sequenceShow/hide mRNA sequence
ATGACTGCAACATATGATGTAGATTTGAACCGTCCAGGTATGCACATGAAGTTGATTAAGTTCCTTCTCAAAATCAAGGCACCTTTAATAGTTTATGTATCATGTAATCC
TGCAACCCGTGCTTGCCATCTTGATTATCTCTGCCACGGCGTGGTGGAGCAAGGCATTAAATGTTGTTACAAACTGAAGAGCTTACAGCCAGTAGATATGTTCCCCCACA
CTCATATTGAATGTGTTTGCCTACTGGAACTCATTCCTGATTCCCAGATGGGACCATGA
Protein sequenceShow/hide protein sequence
MTATYDVDLNRPGMHMKLIKFLLKIKAPLIVYVSCNPATRACHLDYLCHGVVEQGIKCCYKLKSLQPVDMFPHTHIECVCLLELIPDSQMGP