; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc09g03990 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g03990
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionSodium channel protein type 10 subunit alpha like
Genome locationchr9:3086450..3089642
RNA-Seq ExpressionMoc09g03990
SyntenyMoc09g03990
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593392.1 hypothetical protein SDJN03_12868, partial [Cucurbita argyrosperma subsp. sororia]3.8e-4478.15Show/hide
Query:  YHSTHSLTASTIAVPLCSRFRVPPEICFSSHHRRRSSLLLSSNPYASSAACSAAVRPPPDSGPPPDKDPIRAKGFPAFFSKFQDRVQIFFAVLFWMSLFF
        YH + ++TA  IA+PL S F  PPEI FS  H RRSSLLLSSNP A SA C+AAVRPPPDS PPPD+DPIR KGFPA FSKF DRVQIFFAVLFWMSLFF
Subjt:  YHSTHSLTASTIAVPLCSRFRVPPEICFSSHHRRRSSLLLSSNPYASSAACSAAVRPPPDSGPPPDKDPIRAKGFPAFFSKFQDRVQIFFAVLFWMSLFF

Query:  WTSVLDGKNRPNKGSRFRR
        WTS LDGKNRPNKGSRFRR
Subjt:  WTSVLDGKNRPNKGSRFRR

XP_022145821.1 uncharacterized protein LOC111015178 [Momordica charantia]6.2e-63100Show/hide
Query:  MSIFYHSTHSLTASTIAVPLCSRFRVPPEICFSSHHRRRSSLLLSSNPYASSAACSAAVRPPPDSGPPPDKDPIRAKGFPAFFSKFQDRVQIFFAVLFWM
        MSIFYHSTHSLTASTIAVPLCSRFRVPPEICFSSHHRRRSSLLLSSNPYASSAACSAAVRPPPDSGPPPDKDPIRAKGFPAFFSKFQDRVQIFFAVLFWM
Subjt:  MSIFYHSTHSLTASTIAVPLCSRFRVPPEICFSSHHRRRSSLLLSSNPYASSAACSAAVRPPPDSGPPPDKDPIRAKGFPAFFSKFQDRVQIFFAVLFWM

Query:  SLFFWTSVLDGKNRPNKGSRFRR
        SLFFWTSVLDGKNRPNKGSRFRR
Subjt:  SLFFWTSVLDGKNRPNKGSRFRR

XP_022959617.1 uncharacterized protein LOC111460643 isoform X1 [Cucurbita moschata]3.8e-4478.15Show/hide
Query:  YHSTHSLTASTIAVPLCSRFRVPPEICFSSHHRRRSSLLLSSNPYASSAACSAAVRPPPDSGPPPDKDPIRAKGFPAFFSKFQDRVQIFFAVLFWMSLFF
        YH + ++TA  IA+PL S F  PPEI FS  H RRSSLLLSSNP A SA C+AAVRPPPDS PPPD+DPIR KGFPA FSKF DRVQIFFAVLFWMSLFF
Subjt:  YHSTHSLTASTIAVPLCSRFRVPPEICFSSHHRRRSSLLLSSNPYASSAACSAAVRPPPDSGPPPDKDPIRAKGFPAFFSKFQDRVQIFFAVLFWMSLFF

Query:  WTSVLDGKNRPNKGSRFRR
        WTS LDGKNRPNKGSRFRR
Subjt:  WTSVLDGKNRPNKGSRFRR

XP_023513765.1 uncharacterized protein LOC111778275 isoform X1 [Cucurbita pepo subsp. pepo]5.5e-4377.31Show/hide
Query:  YHSTHSLTASTIAVPLCSRFRVPPEICFSSHHRRRSSLLLSSNPYASSAACSAAVRPPPDSGPPPDKDPIRAKGFPAFFSKFQDRVQIFFAVLFWMSLFF
        YH + ++TA  IA+PL S F  PPEI FS  H RRSSLLLSSNP A SA C AAVRPPPDS PPPD+DPIR KGF A FSKF DRVQIFFAVLFWMSLFF
Subjt:  YHSTHSLTASTIAVPLCSRFRVPPEICFSSHHRRRSSLLLSSNPYASSAACSAAVRPPPDSGPPPDKDPIRAKGFPAFFSKFQDRVQIFFAVLFWMSLFF

Query:  WTSVLDGKNRPNKGSRFRR
        WTS LDGKNRPNKGSRFRR
Subjt:  WTSVLDGKNRPNKGSRFRR

XP_038899182.1 uncharacterized protein LOC120086544 [Benincasa hispida]3.2e-4377.31Show/hide
Query:  YHSTHSLTASTIAVPLCSRFRVPPEICFSSHHRRRSSLLLSSNPYASSAACSAAVRPPPDSGPPPDKDPIRAKGFPAFFSKFQDRVQIFFAVLFWMSLFF
        + S+ S+TAS+IAVPLCS F   PEICFSSH RR S LLLSS+    SA CSAAVRPPPDS PPP++DPIR KGFPA  SKF+DRVQIFFAVLFWMSLFF
Subjt:  YHSTHSLTASTIAVPLCSRFRVPPEICFSSHHRRRSSLLLSSNPYASSAACSAAVRPPPDSGPPPDKDPIRAKGFPAFFSKFQDRVQIFFAVLFWMSLFF

Query:  WTSVLDGKNRPNKGSRFRR
        WTS LDGKNRPNKGSRFRR
Subjt:  WTSVLDGKNRPNKGSRFRR

TrEMBL top hitse value%identityAlignment
A0A0A0K8T0 Uncharacterized protein3.6e-4070.59Show/hide
Query:  YHSTHSLTASTIAVPLCSRFRVPPEICFSSHHRRRSSLLLSSNPYASSAACSAAVRPPPDSGPPPDKDPIRAKGFPAFFSKFQDRVQIFFAVLFWMSLFF
        + S+ S+ AS+IA+PLCS F +  EICFS H RR S L  SSN YA S  CSAAVRPPPDS PPP++DP+R  G PA FSKF+DRVQIF AVLFWMSLFF
Subjt:  YHSTHSLTASTIAVPLCSRFRVPPEICFSSHHRRRSSLLLSSNPYASSAACSAAVRPPPDSGPPPDKDPIRAKGFPAFFSKFQDRVQIFFAVLFWMSLFF

Query:  WTSVLDGKNRPNKGSRFRR
        WTS LDG+NRPNKGSRFRR
Subjt:  WTSVLDGKNRPNKGSRFRR

A0A1S3CE06 uncharacterized protein LOC1034997981.0e-3970.59Show/hide
Query:  YHSTHSLTASTIAVPLCSRFRVPPEICFSSHHRRRSSLLLSSNPYASSAACSAAVRPPPDSGPPPDKDPIRAKGFPAFFSKFQDRVQIFFAVLFWMSLFF
        + S+HS+ AS+IA+PLCS F    +ICFS   RR S L  SSN YA S  CSAAVRPPPDS PPP++DP+R  G PA FSKF+DRVQIF AVLFWMSLFF
Subjt:  YHSTHSLTASTIAVPLCSRFRVPPEICFSSHHRRRSSLLLSSNPYASSAACSAAVRPPPDSGPPPDKDPIRAKGFPAFFSKFQDRVQIFFAVLFWMSLFF

Query:  WTSVLDGKNRPNKGSRFRR
        WTS LDGKNRPNKGSRFRR
Subjt:  WTSVLDGKNRPNKGSRFRR

A0A6J1CXJ1 uncharacterized protein LOC1110151783.0e-63100Show/hide
Query:  MSIFYHSTHSLTASTIAVPLCSRFRVPPEICFSSHHRRRSSLLLSSNPYASSAACSAAVRPPPDSGPPPDKDPIRAKGFPAFFSKFQDRVQIFFAVLFWM
        MSIFYHSTHSLTASTIAVPLCSRFRVPPEICFSSHHRRRSSLLLSSNPYASSAACSAAVRPPPDSGPPPDKDPIRAKGFPAFFSKFQDRVQIFFAVLFWM
Subjt:  MSIFYHSTHSLTASTIAVPLCSRFRVPPEICFSSHHRRRSSLLLSSNPYASSAACSAAVRPPPDSGPPPDKDPIRAKGFPAFFSKFQDRVQIFFAVLFWM

Query:  SLFFWTSVLDGKNRPNKGSRFRR
        SLFFWTSVLDGKNRPNKGSRFRR
Subjt:  SLFFWTSVLDGKNRPNKGSRFRR

A0A6J1H516 uncharacterized protein LOC111460643 isoform X11.8e-4478.15Show/hide
Query:  YHSTHSLTASTIAVPLCSRFRVPPEICFSSHHRRRSSLLLSSNPYASSAACSAAVRPPPDSGPPPDKDPIRAKGFPAFFSKFQDRVQIFFAVLFWMSLFF
        YH + ++TA  IA+PL S F  PPEI FS  H RRSSLLLSSNP A SA C+AAVRPPPDS PPPD+DPIR KGFPA FSKF DRVQIFFAVLFWMSLFF
Subjt:  YHSTHSLTASTIAVPLCSRFRVPPEICFSSHHRRRSSLLLSSNPYASSAACSAAVRPPPDSGPPPDKDPIRAKGFPAFFSKFQDRVQIFFAVLFWMSLFF

Query:  WTSVLDGKNRPNKGSRFRR
        WTS LDGKNRPNKGSRFRR
Subjt:  WTSVLDGKNRPNKGSRFRR

A0A6J1KZ93 uncharacterized protein LOC111497700 isoform X11.0e-4276.47Show/hide
Query:  YHSTHSLTASTIAVPLCSRFRVPPEICFSSHHRRRSSLLLSSNPYASSAACSAAVRPPPDSGPPPDKDPIRAKGFPAFFSKFQDRVQIFFAVLFWMSLFF
        YH + ++TA  IA+PL S F   PEI FS  H RRSSLLLS NP A SA C+AAVRPPPDS PPPD+DPIR KGFPA FSKF DRVQIFFAVLFWMSLFF
Subjt:  YHSTHSLTASTIAVPLCSRFRVPPEICFSSHHRRRSSLLLSSNPYASSAACSAAVRPPPDSGPPPDKDPIRAKGFPAFFSKFQDRVQIFFAVLFWMSLFF

Query:  WTSVLDGKNRPNKGSRFRR
        WTS LDGKNRPNKGSRFRR
Subjt:  WTSVLDGKNRPNKGSRFRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52550.1 unknown protein7.9e-0837.21Show/hide
Query:  LLLSSNPYASSAACSAAVRPPPDSGPPPDKDPIRAKGFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLDGK-----NRPNKGSRFR
        L+ +  P    A        PP   PPP K+           S  QDRV+IF +VL W+SLFFW S L G+      +  KGSRF+
Subjt:  LLLSSNPYASSAACSAAVRPPPDSGPPPDKDPIRAKGFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLDGK-----NRPNKGSRFR

AT3G15780.1 unknown protein4.1e-1242.22Show/hide
Query:  HHRRRSSLLLSSNPYASSAACSAAVRPPPDSGPPPDKDPIRAKGFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLD--GKNRPNKGSRFR
        H  RR+++LL+S       A +     PP   PPP +D  + +G     ++ QDRV+IF AV FWM LFFW +V D  GK +  KGSRF+
Subjt:  HHRRRSSLLLSSNPYASSAACSAAVRPPPDSGPPPDKDPIRAKGFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLD--GKNRPNKGSRFR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTGGCTACCTCCACATCTCATCCACCTTCCCTCAAACTCGCTCTCGCTCTGGCTTTCATCTTCATCTCCTTTACAGATGGGTCGGTTTTGTCGAAGGGT
GGGGACGGCGGAGGGGAGCTAAGTAGGAGTTATGTGGGTGGGAGGAAAATGGTGGTGGGTTCGAGGCCGCCCGGGTGCGAGAACAAGTGCATGAGTTGCAGGCCG
TGCATGGCAGCGGTGGTGGTGCCGGTGCACCGGCTCCTCCGGATGTCGATTTTCTATCATTCTACGCACTCCCTCACCGCCTCTACAATCGCCGTTCCTCTCTGC
TCGCGCTTCCGTGTTCCGCCGGAAATCTGCTTCTCTTCGCATCATCGCCGCCGTTCATCTCTCTTGCTCTCCTCCAATCCTTATGCTAGCTCCGCCGCTTGCAGC
GCAGCAGTACGTCCGCCACCGGACTCCGGTCCGCCTCCCGACAAGGATCCGATTCGTGCAAAAGGTTTCCCAGCATTTTTCTCAAAATTTCAGGACAGAGTACAG
ATTTTCTTTGCTGTGTTATTCTGGATGTCCCTCTTCTTCTGGACTTCAGTATTGGATGGAAAAAATAGACCCAATAAGGGCTCTCGATTTAGACGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTTGGCTACCTCCACATCTCATCCACCTTCCCTCAAACTCGCTCTCGCTCTGGCTTTCATCTTCATCTCCTTTACAGATGGGTCGGTTTTGTCGAAGGGT
GGGGACGGCGGAGGGGAGCTAAGTAGGAGTTATGTGGGTGGGAGGAAAATGGTGGTGGGTTCGAGGCCGCCCGGGTGCGAGAACAAGTGCATGAGTTGCAGGCCG
TGCATGGCAGCGGTGGTGGTGCCGGTGCACCGGCTCCTCCGGATGTCGATTTTCTATCATTCTACGCACTCCCTCACCGCCTCTACAATCGCCGTTCCTCTCTGC
TCGCGCTTCCGTGTTCCGCCGGAAATCTGCTTCTCTTCGCATCATCGCCGCCGTTCATCTCTCTTGCTCTCCTCCAATCCTTATGCTAGCTCCGCCGCTTGCAGC
GCAGCAGTACGTCCGCCACCGGACTCCGGTCCGCCTCCCGACAAGGATCCGATTCGTGCAAAAGGTTTCCCAGCATTTTTCTCAAAATTTCAGGACAGAGTACAG
ATTTTCTTTGCTGTGTTATTCTGGATGTCCCTCTTCTTCTGGACTTCAGTATTGGATGGAAAAAATAGACCCAATAAGGGCTCTCGATTTAGACGATAG
Protein sequenceShow/hide protein sequence
MALATSTSHPPSLKLALALAFIFISFTDGSVLSKGGDGGGELSRSYVGGRKMVVGSRPPGCENKCMSCRPCMAAVVVPVHRLLRMSIFYHSTHSLTASTIAVPLC
SRFRVPPEICFSSHHRRRSSLLLSSNPYASSAACSAAVRPPPDSGPPPDKDPIRAKGFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLDGKNRPNKGSRFRR