CuGenDBv2

Gene ID	Moc09g04480
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	photosynthetic NDH subunit of subcomplex B 1, chloroplastic
Genome location	chr9:3435406..3438561
RNA-Seq Expression	Moc09g04480
Synteny	Moc09g04480
Gene Ontology terms	GO:0009773 - photosynthetic electron transport in photosystem I (biological process) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0010598 - NAD(P)H dehydrogenase complex (plastoquinone) (cellular component) GO:0016757 - transferase activity, transferring glycosyl groups (molecular function)
InterPro domains	IPR044983 - Photosynthetic NDH subunit of subcomplex B 1, chloroplastic

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6575629.1 Photosynthetic NDH subunit of subcomplex B 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

9.2e-248

91.91

Show/hide

Query:  MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPT-AKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
        MATSSLPTKSLPPFLP+S+ PPSSPSTHFTKP FLAPPDIS  +++ SP K HIP+ AKKNPW DPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
Subjt:  MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPT-AKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY

Query:  GFLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL
        GFLKFPQGYMVE+ASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPA+YTDMVGLL
Subjt:  GFLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL

Query:  KSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEVV
        K RYYDMVLSTKLAG+GHA FLFMTTARDRVSYIYPDVNAAGAGLFLS+TFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKV ISRKLKE+V
Subjt:  KSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEVV

Query:  EEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIAT
        +EKY +AG EKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIA+ IRGFKPVFVIPHEKERENVEEEVGD+A I+FITTPGQLAALINDSAG+IAT
Subjt:  EEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIAT

Query:  NTAAIQLAIAREKPSIALFSSDEKAKLFVPDAESKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF
        NTAAIQLAIAREKPSIALF S+EKAKLFVPDAE+KRCI VSS TGRLIDIDMGTVKRAIQSFEVPLALAF
Subjt:  NTAAIQLAIAREKPSIALFSSDEKAKLFVPDAESKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF

XP_022145001.1 photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Momordica charantia]

3.6e-268

100

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Query:  MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPTAKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYG
        MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPTAKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYG
Subjt:  MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPTAKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYG

Query:  FLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLK
        FLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLK
Subjt:  FLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLK

Query:  SRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEVVE
        SRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEVVE
Subjt:  SRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEVVE

Query:  EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIATN
        EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIATN
Subjt:  EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIATN

Query:  TAAIQLAIAREKPSIALFSSDEKAKLFVPDAESKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF
        TAAIQLAIAREKPSIALFSSDEKAKLFVPDAESKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF
Subjt:  TAAIQLAIAREKPSIALFSSDEKAKLFVPDAESKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF

XP_022953552.1 photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Cucurbita moschata]

7.1e-248

91.91

Show/hide

Query:  MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPT-AKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
        MATSSLPTKSLPPFLP+S+ PPSSPSTHFTKP FLAPPDIS  +++ SP K HIP+ AKKNPW DPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
Subjt:  MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPT-AKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY

Query:  GFLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL
        GFLKFPQGYMVE+ASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPA+YTDMVGLL
Subjt:  GFLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL

Query:  KSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEVV
        K RYYDMVLSTKLAG+GHA FLFMTTARDRVSYIYPDVNAAGAGLFLS+TFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKV ISRKLKE+V
Subjt:  KSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEVV

Query:  EEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIAT
        +EKY +AG EKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIA+ IRGFKPVFVIPHEKERENVEEEVGD+A I+FITTPGQLAALINDSAG+IAT
Subjt:  EEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIAT

Query:  NTAAIQLAIAREKPSIALFSSDEKAKLFVPDAESKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF
        NTAAIQLAIAREKPSIALF S+EKAKLFVPD+E+KRCI VSSATGRLIDIDMGTVKRAIQSFEVPLALAF
Subjt:  NTAAIQLAIAREKPSIALFSSDEKAKLFVPDAESKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF

XP_022992479.1 photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Cucurbita maxima]

6.0e-247

91.7

Show/hide

Query:  MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPT-AKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
        MATSSLPTKSLPPFLP+S+ PPSSPSTHFTKP FLAPPDIS  +++ SP K HIP+ AKKNPW DPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
Subjt:  MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPT-AKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY

Query:  GFLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL
        GFLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFP IQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPA+YTDMVGLL
Subjt:  GFLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL

Query:  KSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEVV
        K RYYDMVLSTKLAG+GHA FLFMTTARDRVSYIYPDVNAAGAGLFLS+TFKP+SSNLSEGGFNMYHQM DWLGRPFRSVPRHPVPPLKV ISRKLKE+V
Subjt:  KSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEVV

Query:  EEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIAT
        +EKY +AG EKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIA+ IRGFKPVFVIPHEKERENVEEEVGD+A I+FITTPGQLAALINDSAG+IAT
Subjt:  EEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIAT

Query:  NTAAIQLAIAREKPSIALFSSDEKAKLFVPDAESKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF
        NTAAIQLAIAREKPSIALF S+EKAKLFVPDAE+KRCI VSSATGRLIDIDMGTVKRAIQSFEVPLALAF
Subjt:  NTAAIQLAIAREKPSIALFSSDEKAKLFVPDAESKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF

XP_038896546.1 photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Benincasa hispida]

1.3e-246

91.9

Show/hide

Query:  MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPTAKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYG
        MATSSLPTKSLPPF P+S+  PSSPSTHFTKPLFLAPPDIS  +++ S  K  IP++KKN W DPFDDGDDP+MEYGSLFADGKQEEDPRPPDNPNNPYG
Subjt:  MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPTAKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYG

Query:  FLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLK
        FLKFPQGYMVEIASLGLKLRGDVRRCCCV+SGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLK
Subjt:  FLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLK

Query:  SRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEVVE
         RYYDMVLSTKLAG+GHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKV ISRKLKEVV 
Subjt:  SRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEVVE

Query:  EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIATN
        EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIA+ +RGFKPVFVIPHEKERENVEEEVGDDA I+FITTPGQLAALINDSAG+IATN
Subjt:  EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIATN

Query:  TAAIQLAIAREKPSIALFSSDEKAKLFVPDAESKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF
        TAA+QLAIAREKPSIALF S+EKAKLFVPDAE+KRCITVSSATGRL DID+GTVK+AIQSFEVPLALAF
Subjt:  TAAIQLAIAREKPSIALFSSDEKAKLFVPDAESKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CEK1 photosynthetic NDH subunit of subcomplex B 1, chloroplastic

5.6e-243

90.83

Show/hide

Query:  MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPTAKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYG
        MATSSLPTKSLPPFLP+S+ PPSSPSTHFTKPLFL+P  IS LST+    K  IP +KKNPWFDPFDDG+DP+MEYGSLF+DGKQEEDPRPPDNPNNPYG
Subjt:  MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPTAKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYG

Query:  FLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLK
        FLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVG+LK
Subjt:  FLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLK

Query:  SRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEVVE
         RYYDMVLSTKLAG+GHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKP+SSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKV I+RKLKEV+ 
Subjt:  SRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEVVE

Query:  EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIATN
        EKYKKAG EKGKYIVIHGIESDSKASMQSKGDTDSLLPI+AWAEIA+ IRGFKPVFVIP EKERENVEEEVG++A I+FITTPGQLAALINDSAGLIATN
Subjt:  EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIATN

Query:  TAAIQLAIAREKPSIALFSSDEKAKLFVPDAESKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF
        TAA+QLAIAREKPSIALF S+EKAKLFVPDAE+KRCITVSS TGRLIDIDMGT+K+AIQSFEVPLALAF
Subjt:  TAAIQLAIAREKPSIALFSSDEKAKLFVPDAESKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF

A0A5A7UYW0 Photosynthetic NDH subunit of subcomplex B 1

6.7e-244

91.04

Show/hide

Query:  MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPTAKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYG
        MATSSLPTKSLPPFLP+S+ PPSSPSTHFTKPLFL+P  IS LST+    K  IP +KKNPWFDPFDDG+DP+MEYGSLF+DGKQEEDPRPPDNPNNPYG
Subjt:  MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPTAKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYG

Query:  FLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLK
        FLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVG+LK
Subjt:  FLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLK

Query:  SRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEVVE
         RYYDMVLSTKLAG+GHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKP+SSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKV I+RKLKEV+ 
Subjt:  SRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEVVE

Query:  EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIATN
        EKYKKAG EKGKYIVIHGIESDSKASMQSKGDTDSLLPI+AWAEIA+ IRGFKPVFVIPHEKERENVEEEVG++A I+FITTPGQLAALINDSAGLIATN
Subjt:  EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIATN

Query:  TAAIQLAIAREKPSIALFSSDEKAKLFVPDAESKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF
        TAA+QLAIAREKPSIALF S+EKAKLFVPDAE+KRCITVSS TGRLIDIDMGT+K+AIQSFEVPLALAF
Subjt:  TAAIQLAIAREKPSIALFSSDEKAKLFVPDAESKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF

A0A6J1CV27 photosynthetic NDH subunit of subcomplex B 1, chloroplastic

1.7e-268

100

Show/hide

Query:  MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPTAKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYG
        MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPTAKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYG
Subjt:  MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPTAKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYG

Query:  FLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLK
        FLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLK
Subjt:  FLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLK

Query:  SRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEVVE
        SRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEVVE
Subjt:  SRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEVVE

Query:  EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIATN
        EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIATN
Subjt:  EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIATN

Query:  TAAIQLAIAREKPSIALFSSDEKAKLFVPDAESKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF
        TAAIQLAIAREKPSIALFSSDEKAKLFVPDAESKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF
Subjt:  TAAIQLAIAREKPSIALFSSDEKAKLFVPDAESKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF

A0A6J1GNJ2 photosynthetic NDH subunit of subcomplex B 1, chloroplastic

3.4e-248

91.91

Show/hide

Query:  MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPT-AKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
        MATSSLPTKSLPPFLP+S+ PPSSPSTHFTKP FLAPPDIS  +++ SP K HIP+ AKKNPW DPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
Subjt:  MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPT-AKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY

Query:  GFLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL
        GFLKFPQGYMVE+ASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPA+YTDMVGLL
Subjt:  GFLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL

Query:  KSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEVV
        K RYYDMVLSTKLAG+GHA FLFMTTARDRVSYIYPDVNAAGAGLFLS+TFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKV ISRKLKE+V
Subjt:  KSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEVV

Query:  EEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIAT
        +EKY +AG EKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIA+ IRGFKPVFVIPHEKERENVEEEVGD+A I+FITTPGQLAALINDSAG+IAT
Subjt:  EEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIAT

Query:  NTAAIQLAIAREKPSIALFSSDEKAKLFVPDAESKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF
        NTAAIQLAIAREKPSIALF S+EKAKLFVPD+E+KRCI VSSATGRLIDIDMGTVKRAIQSFEVPLALAF
Subjt:  NTAAIQLAIAREKPSIALFSSDEKAKLFVPDAESKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF

A0A6J1JXN2 photosynthetic NDH subunit of subcomplex B 1, chloroplastic

2.9e-247

91.7

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Query:  MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPT-AKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
        MATSSLPTKSLPPFLP+S+ PPSSPSTHFTKP FLAPPDIS  +++ SP K HIP+ AKKNPW DPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
Subjt:  MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPT-AKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY

Query:  GFLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL
        GFLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFP IQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPA+YTDMVGLL
Subjt:  GFLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL

Query:  KSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEVV
        K RYYDMVLSTKLAG+GHA FLFMTTARDRVSYIYPDVNAAGAGLFLS+TFKP+SSNLSEGGFNMYHQM DWLGRPFRSVPRHPVPPLKV ISRKLKE+V
Subjt:  KSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEVV

Query:  EEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIAT
        +EKY +AG EKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIA+ IRGFKPVFVIPHEKERENVEEEVGD+A I+FITTPGQLAALINDSAG+IAT
Subjt:  EEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIAT

Query:  NTAAIQLAIAREKPSIALFSSDEKAKLFVPDAESKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF
        NTAAIQLAIAREKPSIALF S+EKAKLFVPDAE+KRCI VSSATGRLIDIDMGTVKRAIQSFEVPLALAF
Subjt:  NTAAIQLAIAREKPSIALFSSDEKAKLFVPDAESKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF

SwissProt top hits

e value

%identity

Alignment

Q9S9N6 Photosynthetic NDH subunit of subcomplex B 1, chloroplastic

1.6e-186

72.32

Show/hide

Query:  SSLPTKSLP-PFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPTAKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFL
        SSLP   LP P  P   +PP S S    KPL     +     T+ S   S     K NPW DPFD G+DPD EYGSLFADGKQ+EDPRPPDNP+NPYGFL
Subjt:  SSLPTKSLP-PFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPTAKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFL

Query:  KFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKSR
        KFP+GY VE+ASL LK+RGDVRRCCCVISGGVYENLLFFP IQL+KDRYPGVQ+D++ + RGKQTYELNKNVRW+NVYDPDD++PEPAEYTDM+GLLK R
Subjt:  KFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKSR

Query:  YYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEVVEEK
        YYDMVLSTKLAG+GHA FLFMTTARDRVSYIYP+VN+AGAGL LSETF  +++NLSE G++MY QM DWLGRPFRSVPR P+ PL+V ISRK+KEVV  K
Subjt:  YYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEVVEEK

Query:  YKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIATNTA
        Y+ AGA  GK+IVIHGIESDSKASMQSKGD DSLL ++ WA+I   +RGFKPVFVIPHEKERENVE+ VGDD  I+FITTPGQLAALINDSAG+IATNTA
Subjt:  YKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIATNTA

Query:  AIQLAIAREKPSIALFSSDEKAKLFVPDAESK-RCITVSSATGRLIDIDMGTVKRAIQSFEVPLAL
        AIQLA AR+KP I LFSS+EK KLFVP AE K  C+ ++S TG+L DID+GTVK A+Q FE  LAL
Subjt:  AIQLAIAREKPSIALFSSDEKAKLFVPDAESK-RCITVSSATGRLIDIDMGTVKRAIQSFEVPLAL

Arabidopsis top hits

e value

%identity

Alignment

AT1G15980.1 NDH-dependent cyclic electron flow 1

1.1e-187

72.32

Show/hide

Query:  SSLPTKSLP-PFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPTAKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFL
        SSLP   LP P  P   +PP S S    KPL     +     T+ S   S     K NPW DPFD G+DPD EYGSLFADGKQ+EDPRPPDNP+NPYGFL
Subjt:  SSLPTKSLP-PFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPTAKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFL

Query:  KFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKSR
        KFP+GY VE+ASL LK+RGDVRRCCCVISGGVYENLLFFP IQL+KDRYPGVQ+D++ + RGKQTYELNKNVRW+NVYDPDD++PEPAEYTDM+GLLK R
Subjt:  KFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKSR

Query:  YYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEVVEEK
        YYDMVLSTKLAG+GHA FLFMTTARDRVSYIYP+VN+AGAGL LSETF  +++NLSE G++MY QM DWLGRPFRSVPR P+ PL+V ISRK+KEVV  K
Subjt:  YYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEVVEEK

Query:  YKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIATNTA
        Y+ AGA  GK+IVIHGIESDSKASMQSKGD DSLL ++ WA+I   +RGFKPVFVIPHEKERENVE+ VGDD  I+FITTPGQLAALINDSAG+IATNTA
Subjt:  YKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIATNTA

Query:  AIQLAIAREKPSIALFSSDEKAKLFVPDAESK-RCITVSSATGRLIDIDMGTVKRAIQSFEVPLAL
        AIQLA AR+KP I LFSS+EK KLFVP AE K  C+ ++S TG+L DID+GTVK A+Q FE  LAL
Subjt:  AIQLAIAREKPSIALFSSDEKAKLFVPDAESK-RCITVSSATGRLIDIDMGTVKRAIQSFEVPLAL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTACTTCTTCTCTACCCACCAAATCCCTCCCGCCATTTCTCCCAAGCTCAGCCTCCCCACCTTCTTCTCCTTCAACCCACTTCACCAAGCCGCTCTTTCTAGCCCC
ACCCGACATTTCTCCTCTCTCCACTACCCCATCACCACCAAAATCTCACATCCCCACTGCCAAAAAGAACCCATGGTTCGATCCTTTCGACGACGGAGACGATCCGGACA
TGGAATACGGCTCTCTCTTCGCCGACGGCAAGCAGGAGGAGGACCCTCGGCCGCCCGACAACCCCAATAATCCCTATGGGTTCTTGAAATTTCCTCAGGGCTACATGGTG
GAGATCGCTTCTCTGGGTCTGAAACTCCGGGGAGATGTCCGGCGGTGCTGCTGCGTGATCTCCGGCGGCGTCTACGAGAACTTACTCTTCTTTCCGGCCATTCAATTGCT
CAAGGATCGGTACCCGGGAGTCCAGATAGACGTGGTGGCTTCGGCCAGGGGAAAACAGACTTATGAACTAAACAAGAATGTGAGATGGTCTAATGTCTACGACCCGGATG
ATTATTTTCCTGAACCAGCAGAGTACACTGACATGGTTGGATTGCTCAAGAGTAGGTACTATGACATGGTCTTGTCAACCAAGCTAGCAGGGGTTGGGCATGCAGTGTTT
TTGTTTATGACAACAGCCAGAGATAGAGTGAGCTACATTTACCCAGATGTGAATGCTGCTGGAGCAGGGCTTTTCTTGTCTGAAACATTTAAACCAGATAGCTCCAATCT
TTCTGAGGGAGGGTTCAACATGTATCATCAAATGGTTGATTGGTTGGGGAGGCCATTTCGCAGCGTTCCTAGGCATCCTGTTCCTCCGCTCAAAGTTTTGATTTCGAGAA
AACTGAAGGAGGTTGTAGAGGAGAAGTATAAGAAAGCAGGTGCTGAGAAAGGAAAATATATTGTGATTCATGGGATCGAATCAGATTCCAAAGCCTCAATGCAGTCCAAA
GGTGATACTGATAGCTTGCTGCCCATTCAAGCCTGGGCTGAAATAGCCAGTACTATAAGGGGATTCAAACCAGTTTTTGTCATCCCACATGAAAAAGAAAGAGAGAATGT
CGAGGAAGAGGTCGGGGATGATGCTGGCATCTTATTTATCACAACCCCGGGACAGCTAGCTGCTCTCATTAACGACTCGGCTGGTCTAATAGCCACCAACACAGCTGCTA
TCCAACTCGCCATTGCTCGCGAAAAACCGAGCATTGCTTTGTTTTCCTCTGATGAGAAAGCAAAACTATTTGTTCCCGATGCCGAGTCAAAGAGATGCATCACGGTTTCA
TCAGCGACAGGACGACTAATCGACATCGATATGGGCACGGTTAAAAGGGCCATACAGAGTTTTGAAGTGCCTCTAGCTCTTGCTTTTTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPTAKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMV
EIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKSRYYDMVLSTKLAGVGHAVF
LFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEVVEEKYKKAGAEKGKYIVIHGIESDSKASMQSK
GDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIATNTAAIQLAIAREKPSIALFSSDEKAKLFVPDAESKRCITVS
SATGRLIDIDMGTVKRAIQSFEVPLALAF

Moc09g04480 (gene) of Bitter gourd (OHB3-1) v2 genome