CuGenDBv2

Gene ID	Moc09g04490
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	protein LOW PSII ACCUMULATION 3, chloroplastic
Genome location	chr9:3439735..3445206
RNA-Seq Expression	Moc09g04490
Synteny	Moc09g04490
Gene Ontology terms	NA
InterPro domains	IPR018962 - Domain of unknown function DUF1995 IPR044687 - Protein LOW PSII ACCUMULATION 3

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0058708.1 protein LOW PSII ACCUMULATION 3 [Cucumis melo var. makuwa]

3.3e-196

89.54

Show/hide

Query:  MAIMAFLSSPLHSPSLIR---NKFLLSPLSSSSFSALRRCTPSSLSAAQTFASSRFCFRIHCTDKERAAPVTQRSDPKAGVPVYKPKTYEVLVSDAANSL
        M IMAFLSSP + PSL R   + FL SP+SSS    LRR TPSSL  AQT A+S FCFRIHC DKERAAPVTQ SDPKAGVP+YKPKTYEVLVSDAANSL
Subjt:  MAIMAFLSSPLHSPSLIR---NKFLLSPLSSSSFSALRRCTPSSLSAAQTFASSRFCFRIHCTDKERAAPVTQRSDPKAGVPVYKPKTYEVLVSDAANSL

Query:  AYALEDGKIRVEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGPVTSFFR
        AYALEDGK+R+EIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQE RGTRSCIVFPDKPEKRRAS+LFKTA+DSIDGITVSSLDDVPAGPVTSFFR
Subjt:  AYALEDGKIRVEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGPVTSFFR

Query:  SVRNTLDFDFEDENAGRWTSTDPPSLYIFINCSTRELALIEKYVETFASSTPTLLFNLELETLRADLGLLGFPPKDLHHRFLSQFIPVFYIRIREYSKTV
        SVRNTLDFDFED+NAGRWTS+DPPSLYIFINCSTREL LIEKYVETFASS PTLLFNLELETLRADLGLLGFPPKDLH+RFLSQFIPVFYIRIREYSKTV
Subjt:  SVRNTLDFDFEDENAGRWTSTDPPSLYIFINCSTRELALIEKYVETFASSTPTLLFNLELETLRADLGLLGFPPKDLHHRFLSQFIPVFYIRIREYSKTV

Query:  AIAPYIVNYSGALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSELSSAWRN
        A+APYIVNYSGALFR YPGPWQVMLKQ+DNSYAC+AESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSE+SSAWR+
Subjt:  AIAPYIVNYSGALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSELSSAWRN

KAG6575630.1 Protein LOW PSII ACCUMULATION 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

1.1e-196

89.54

Show/hide

Query:  MAIMAFLSSPLHSPSLIR---NKFLLSPLSSSSFSALRRCTPSSLSAAQTFASSRFCFRIHCTDKERAAPVTQRSDPKAGVPVYKPKTYEVLVSDAANSL
        MAIMAFLSSP H PSL+R   + FL SP+ SSSFSALRR T SSL  AQT A+S FCFRIHC+DKERAAPVT+ SDPKAGVP+YKPKTYEVLVSDAANSL
Subjt:  MAIMAFLSSPLHSPSLIR---NKFLLSPLSSSSFSALRRCTPSSLSAAQTFASSRFCFRIHCTDKERAAPVTQRSDPKAGVPVYKPKTYEVLVSDAANSL

Query:  AYALEDGKIRVEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGPVTSFFR
        AYALEDGK+R+EIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQE RGTRSCIVFPDKP+K RASQLFKTALDSIDGIT+SSLDDVPAGPVTSFFR
Subjt:  AYALEDGKIRVEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGPVTSFFR

Query:  SVRNTLDFDFEDENAGRWTSTDPPSLYIFINCSTRELALIEKYVETFASSTPTLLFNLELETLRADLGLLGFPPKDLHHRFLSQFIPVFYIRIREYSKTV
        S+RNTLDFDFEDENAGRWTS++PPSLYIFINCSTRELA+IEKYVETFASS PTL+FNLELETLRADLGLLGFPPKDLH+RFLSQFIPVFYIRIREYSKTV
Subjt:  SVRNTLDFDFEDENAGRWTSTDPPSLYIFINCSTRELALIEKYVETFASSTPTLLFNLELETLRADLGLLGFPPKDLHHRFLSQFIPVFYIRIREYSKTV

Query:  AIAPYIVNYSGALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSELSSAWRN
         IAPYIVNYSGALFR YPGPWQVMLKQADNSYAC+AESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEED DSE+SSAWR+
Subjt:  AIAPYIVNYSGALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSELSSAWRN

XP_022149990.1 protein LOW PSII ACCUMULATION 3, chloroplastic isoform X1 [Momordica charantia]

1.1e-218

99.74

Show/hide

Query:  MAIMAFLSSPLHSPSLIRNKFLLSPLSSSSFSALRRCTPSSLSAAQTFASSRFCFRIHCTDKERAAPVTQRSDPKAGVPVYKPKTYEVLVSDAANSLAYA
        MAIMAFLSSPLHSPSLIRNKFLLSPLSSSSFSALRRCTPSSLSAAQTFASSRFCFRIHCTDKERAAPVTQRSDPKAGVPVYKPKTYEVLVSDAANSLAYA
Subjt:  MAIMAFLSSPLHSPSLIRNKFLLSPLSSSSFSALRRCTPSSLSAAQTFASSRFCFRIHCTDKERAAPVTQRSDPKAGVPVYKPKTYEVLVSDAANSLAYA

Query:  LEDGKIRVEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGPVTSFFRSVR
        LEDGKIRVEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGPVTSFFRSVR
Subjt:  LEDGKIRVEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGPVTSFFRSVR

Query:  NTLDFDFEDENAGRWTSTDPPSLYIFINCSTRELALIEKYVETFASSTPTLLFNLELETLRADLGLLGFPPKDLHHRFLSQFIPVFYIRIREYSKTVAIA
        NTLDFDFEDENAGRWTSTDPPSLYIFINCSTRELALIEKYVETFASSTPTLLFNLELETLRADLGLLGFPPKDLHHRFLSQFIPVFYIRIREYSKTVAIA
Subjt:  NTLDFDFEDENAGRWTSTDPPSLYIFINCSTRELALIEKYVETFASSTPTLLFNLELETLRADLGLLGFPPKDLHHRFLSQFIPVFYIRIREYSKTVAIA

Query:  PYIVNYSGALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSELSSAWRN
        PYIVNYSGALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSELSSAWR+
Subjt:  PYIVNYSGALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSELSSAWRN

XP_022954402.1 protein LOW PSII ACCUMULATION 3, chloroplastic [Cucurbita moschata]

2.5e-196

89.29

Show/hide

Query:  MAIMAFLSSPLHSPSLIR---NKFLLSPLSSSSFSALRRCTPSSLSAAQTFASSRFCFRIHCTDKERAAPVTQRSDPKAGVPVYKPKTYEVLVSDAANSL
        MAIMAFLSSP H PSL+R   + FL SP+ +SSFSALRR T SSL  AQT A+S FCFRIHC+DKERAAPVT+ SDPKAGVP+YKPKTYEVLVSDAANSL
Subjt:  MAIMAFLSSPLHSPSLIR---NKFLLSPLSSSSFSALRRCTPSSLSAAQTFASSRFCFRIHCTDKERAAPVTQRSDPKAGVPVYKPKTYEVLVSDAANSL

Query:  AYALEDGKIRVEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGPVTSFFR
        AYALEDGK+R+EIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQE RGTRSCIVFPDKP+K RASQLFKTALDSIDGIT+SSLDDVPAGPVTSFFR
Subjt:  AYALEDGKIRVEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGPVTSFFR

Query:  SVRNTLDFDFEDENAGRWTSTDPPSLYIFINCSTRELALIEKYVETFASSTPTLLFNLELETLRADLGLLGFPPKDLHHRFLSQFIPVFYIRIREYSKTV
        S+RNTLDFDFEDENAGRWTS++PPSLYIFINCSTRELA+IEKYVETFASS PTL+FNLELETLRADLGLLGFPPKDLH+RFLSQFIPVFYIRIREYSKTV
Subjt:  SVRNTLDFDFEDENAGRWTSTDPPSLYIFINCSTRELALIEKYVETFASSTPTLLFNLELETLRADLGLLGFPPKDLHHRFLSQFIPVFYIRIREYSKTV

Query:  AIAPYIVNYSGALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSELSSAWRN
         IAPYIVNYSGALFR YPGPWQVMLKQADNSYAC+AESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEED DSE+SSAWR+
Subjt:  AIAPYIVNYSGALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSELSSAWRN

XP_038900014.1 protein LOW PSII ACCUMULATION 3, chloroplastic [Benincasa hispida]

1.9e-196

90.05

Show/hide

Query:  MAIMAFLSSPLHSPSLIR---NKFLLSPLSSSSFSALRRCTPSSLSAAQTFASSRFCFRIHCTDKERAAPVTQRSDPKAGVPVYKPKTYEVLVSDAANSL
        MAIMAF+SSP   PSL R   + FL SP+ SSSF ALRR T SSL  AQT A+S FCFRIHC DKER +PVTQ SDPKAGVP+YKPKTYEVLVSDAANSL
Subjt:  MAIMAFLSSPLHSPSLIR---NKFLLSPLSSSSFSALRRCTPSSLSAAQTFASSRFCFRIHCTDKERAAPVTQRSDPKAGVPVYKPKTYEVLVSDAANSL

Query:  AYALEDGKIRVEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGPVTSFFR
        AYALEDGKIR+EIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQE RGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGPVTSFFR
Subjt:  AYALEDGKIRVEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGPVTSFFR

Query:  SVRNTLDFDFEDENAGRWTSTDPPSLYIFINCSTRELALIEKYVETFASSTPTLLFNLELETLRADLGLLGFPPKDLHHRFLSQFIPVFYIRIREYSKTV
        SVRNTLDFDFEDEN+GRWTS+DPPSLYIFINCSTREL LIEKYVETFASS PTLLFNLELETLRADLGLLGFPPKDLH+RFLSQFIPVFYIRIREYSKTV
Subjt:  SVRNTLDFDFEDENAGRWTSTDPPSLYIFINCSTRELALIEKYVETFASSTPTLLFNLELETLRADLGLLGFPPKDLHHRFLSQFIPVFYIRIREYSKTV

Query:  AIAPYIVNYSGALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSELSSAWRN
        A+APYIVNYSGALFR YPGPWQVMLKQ+DNSYAC+AESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSE+SSAWR+
Subjt:  AIAPYIVNYSGALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSELSSAWRN

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CFB8 protein LOW PSII ACCUMULATION 3, chloroplastic

2.7e-196

89.29

Show/hide

Query:  MAIMAFLSSPLHSPSLIR---NKFLLSPLSSSSFSALRRCTPSSLSAAQTFASSRFCFRIHCTDKERAAPVTQRSDPKAGVPVYKPKTYEVLVSDAANSL
        M IMAF+SSP + PSL R   + FL SP+SSS    LRR TPSSL  AQT A+S FCFRIHC DKERAAPVTQ SDPKAGVP+YKPKTYEVLVSDAANSL
Subjt:  MAIMAFLSSPLHSPSLIR---NKFLLSPLSSSSFSALRRCTPSSLSAAQTFASSRFCFRIHCTDKERAAPVTQRSDPKAGVPVYKPKTYEVLVSDAANSL

Query:  AYALEDGKIRVEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGPVTSFFR
        AYALEDGK+R+EIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQE RGTRSCIVFPDKPEKRRAS+LFKTA+DSIDGITVSSLDDVPAGPVTSFFR
Subjt:  AYALEDGKIRVEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGPVTSFFR

Query:  SVRNTLDFDFEDENAGRWTSTDPPSLYIFINCSTRELALIEKYVETFASSTPTLLFNLELETLRADLGLLGFPPKDLHHRFLSQFIPVFYIRIREYSKTV
        SVRNTLDFDFED+NAGRWTS+DPPSLYIFINCSTREL LIEKYVETFASS PTLLFNLELETLRADLGLLGFPPKDLH+RFLSQFIPVFYIRIREYSKTV
Subjt:  SVRNTLDFDFEDENAGRWTSTDPPSLYIFINCSTRELALIEKYVETFASSTPTLLFNLELETLRADLGLLGFPPKDLHHRFLSQFIPVFYIRIREYSKTV

Query:  AIAPYIVNYSGALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSELSSAWRN
        A+APYIVNYSGALFR YPGPWQVMLKQ+DNSYAC+AESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSE+SSAWR+
Subjt:  AIAPYIVNYSGALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSELSSAWRN

A0A5A7UU42 Protein LOW PSII ACCUMULATION 3

1.6e-196

89.54

Show/hide

Query:  MAIMAFLSSPLHSPSLIR---NKFLLSPLSSSSFSALRRCTPSSLSAAQTFASSRFCFRIHCTDKERAAPVTQRSDPKAGVPVYKPKTYEVLVSDAANSL
        M IMAFLSSP + PSL R   + FL SP+SSS    LRR TPSSL  AQT A+S FCFRIHC DKERAAPVTQ SDPKAGVP+YKPKTYEVLVSDAANSL
Subjt:  MAIMAFLSSPLHSPSLIR---NKFLLSPLSSSSFSALRRCTPSSLSAAQTFASSRFCFRIHCTDKERAAPVTQRSDPKAGVPVYKPKTYEVLVSDAANSL

Query:  AYALEDGKIRVEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGPVTSFFR
        AYALEDGK+R+EIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQE RGTRSCIVFPDKPEKRRAS+LFKTA+DSIDGITVSSLDDVPAGPVTSFFR
Subjt:  AYALEDGKIRVEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGPVTSFFR

Query:  SVRNTLDFDFEDENAGRWTSTDPPSLYIFINCSTRELALIEKYVETFASSTPTLLFNLELETLRADLGLLGFPPKDLHHRFLSQFIPVFYIRIREYSKTV
        SVRNTLDFDFED+NAGRWTS+DPPSLYIFINCSTREL LIEKYVETFASS PTLLFNLELETLRADLGLLGFPPKDLH+RFLSQFIPVFYIRIREYSKTV
Subjt:  SVRNTLDFDFEDENAGRWTSTDPPSLYIFINCSTRELALIEKYVETFASSTPTLLFNLELETLRADLGLLGFPPKDLHHRFLSQFIPVFYIRIREYSKTV

Query:  AIAPYIVNYSGALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSELSSAWRN
        A+APYIVNYSGALFR YPGPWQVMLKQ+DNSYAC+AESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSE+SSAWR+
Subjt:  AIAPYIVNYSGALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSELSSAWRN

A0A6J1D790 protein LOW PSII ACCUMULATION 3, chloroplastic isoform X1

5.1e-219

99.74

Show/hide

Query:  MAIMAFLSSPLHSPSLIRNKFLLSPLSSSSFSALRRCTPSSLSAAQTFASSRFCFRIHCTDKERAAPVTQRSDPKAGVPVYKPKTYEVLVSDAANSLAYA
        MAIMAFLSSPLHSPSLIRNKFLLSPLSSSSFSALRRCTPSSLSAAQTFASSRFCFRIHCTDKERAAPVTQRSDPKAGVPVYKPKTYEVLVSDAANSLAYA
Subjt:  MAIMAFLSSPLHSPSLIRNKFLLSPLSSSSFSALRRCTPSSLSAAQTFASSRFCFRIHCTDKERAAPVTQRSDPKAGVPVYKPKTYEVLVSDAANSLAYA

Query:  LEDGKIRVEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGPVTSFFRSVR
        LEDGKIRVEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGPVTSFFRSVR
Subjt:  LEDGKIRVEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGPVTSFFRSVR

Query:  NTLDFDFEDENAGRWTSTDPPSLYIFINCSTRELALIEKYVETFASSTPTLLFNLELETLRADLGLLGFPPKDLHHRFLSQFIPVFYIRIREYSKTVAIA
        NTLDFDFEDENAGRWTSTDPPSLYIFINCSTRELALIEKYVETFASSTPTLLFNLELETLRADLGLLGFPPKDLHHRFLSQFIPVFYIRIREYSKTVAIA
Subjt:  NTLDFDFEDENAGRWTSTDPPSLYIFINCSTRELALIEKYVETFASSTPTLLFNLELETLRADLGLLGFPPKDLHHRFLSQFIPVFYIRIREYSKTVAIA

Query:  PYIVNYSGALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSELSSAWRN
        PYIVNYSGALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSELSSAWR+
Subjt:  PYIVNYSGALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSELSSAWRN

A0A6J1GQW6 protein LOW PSII ACCUMULATION 3, chloroplastic

1.2e-196

89.29

Show/hide

Query:  MAIMAFLSSPLHSPSLIR---NKFLLSPLSSSSFSALRRCTPSSLSAAQTFASSRFCFRIHCTDKERAAPVTQRSDPKAGVPVYKPKTYEVLVSDAANSL
        MAIMAFLSSP H PSL+R   + FL SP+ +SSFSALRR T SSL  AQT A+S FCFRIHC+DKERAAPVT+ SDPKAGVP+YKPKTYEVLVSDAANSL
Subjt:  MAIMAFLSSPLHSPSLIR---NKFLLSPLSSSSFSALRRCTPSSLSAAQTFASSRFCFRIHCTDKERAAPVTQRSDPKAGVPVYKPKTYEVLVSDAANSL

Query:  AYALEDGKIRVEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGPVTSFFR
        AYALEDGK+R+EIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQE RGTRSCIVFPDKP+K RASQLFKTALDSIDGIT+SSLDDVPAGPVTSFFR
Subjt:  AYALEDGKIRVEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGPVTSFFR

Query:  SVRNTLDFDFEDENAGRWTSTDPPSLYIFINCSTRELALIEKYVETFASSTPTLLFNLELETLRADLGLLGFPPKDLHHRFLSQFIPVFYIRIREYSKTV
        S+RNTLDFDFEDENAGRWTS++PPSLYIFINCSTRELA+IEKYVETFASS PTL+FNLELETLRADLGLLGFPPKDLH+RFLSQFIPVFYIRIREYSKTV
Subjt:  SVRNTLDFDFEDENAGRWTSTDPPSLYIFINCSTRELALIEKYVETFASSTPTLLFNLELETLRADLGLLGFPPKDLHHRFLSQFIPVFYIRIREYSKTV

Query:  AIAPYIVNYSGALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSELSSAWRN
         IAPYIVNYSGALFR YPGPWQVMLKQADNSYAC+AESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEED DSE+SSAWR+
Subjt:  AIAPYIVNYSGALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSELSSAWRN

A0A6J1JTN7 protein LOW PSII ACCUMULATION 3, chloroplastic

2.1e-196

89.03

Show/hide

Query:  MAIMAFLSSPLHSPSLIR---NKFLLSPLSSSSFSALRRCTPSSLSAAQTFASSRFCFRIHCTDKERAAPVTQRSDPKAGVPVYKPKTYEVLVSDAANSL
        MAIMAFLSSP H PSL+R   + FL SP+ SSSFSALRR T SSL  AQT A+S FCFRIHC+DKERAAPVT+ SDPKAGVP+YKPKTYEVLVSDAANSL
Subjt:  MAIMAFLSSPLHSPSLIR---NKFLLSPLSSSSFSALRRCTPSSLSAAQTFASSRFCFRIHCTDKERAAPVTQRSDPKAGVPVYKPKTYEVLVSDAANSL

Query:  AYALEDGKIRVEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGPVTSFFR
        AYALEDGK+R+EIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQE RGTRSCIVFPDKP+K RASQLFKTALDSIDGIT+SSLDD+PAGPVTSFFR
Subjt:  AYALEDGKIRVEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGPVTSFFR

Query:  SVRNTLDFDFEDENAGRWTSTDPPSLYIFINCSTRELALIEKYVETFASSTPTLLFNLELETLRADLGLLGFPPKDLHHRFLSQFIPVFYIRIREYSKTV
        S+RNTLDFDFEDENAGRWTS++PPSLYIFINCSTRELA+IEKYVETFASS PTL+FNLELETLRADLGLLGFPPKDLH+RFLSQFIPVFYIRIREYSKTV
Subjt:  SVRNTLDFDFEDENAGRWTSTDPPSLYIFINCSTRELALIEKYVETFASSTPTLLFNLELETLRADLGLLGFPPKDLHHRFLSQFIPVFYIRIREYSKTV

Query:  AIAPYIVNYSGALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSELSSAWRN
         IAPYIVNYSGALFR YPGPWQVMLKQ DNSYAC+AESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEED DSE+SSAWR+
Subjt:  AIAPYIVNYSGALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSELSSAWRN

SwissProt top hits

e value

%identity

Alignment

Q8H0W0 Protein LPA3

2.4e-149

77.88

Show/hide

Query:  TQRSDPKAGVPVYKPKTYEVLVSDAANSLAYALEDGKIRVEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQL
        +  SDP+ GVP+YKPK+YEVL +DAANSLA+AL+D K R+EIDFPPLPS+ISSYKGSSD+FIDANIQLA+ V R LQE   TR+CIVFPDKPEKRRASQ 
Subjt:  TQRSDPKAGVPVYKPKTYEVLVSDAANSLAYALEDGKIRVEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQL

Query:  FKTALDSIDGITVSSLDDVPAGPVTSFFRSVRNTLDFDFEDENAGRWTSTDPPSLYIFINCSTRELALIEKYVETFASSTPTLLFNLELETLRADLGLLG
        FK A DS+DGI++ SLDD+P   VT+FFRS+R+TLDFDFEDEN G W   +PP+LYIFINCSTREL+ IEK+VETFASSTP LLFNLEL+TLRADLGLLG
Subjt:  FKTALDSIDGITVSSLDDVPAGPVTSFFRSVRNTLDFDFEDENAGRWTSTDPPSLYIFINCSTRELALIEKYVETFASSTPTLLFNLELETLRADLGLLG

Query:  FPPKDLHHRFLSQFIPVFYIRIREYSKTVAIAPYIVNYSGALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRG
        FPPKDLH+RFLSQFIPVFYIR REYSKTVA+AP+++NY+GALFR YPGPWQVMLKQ D S+AC+AES TRFTLGETK+ELL+VLGLQEE+GSSLEFLRRG
Subjt:  FPPKDLHHRFLSQFIPVFYIRIREYSKTVAIAPYIVNYSGALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRG

Query:  YKAATWWEEDVDSELSSAWRN
        YK+ATWWEEDV+ E SS WRN
Subjt:  YKAATWWEEDVDSELSSAWRN

Arabidopsis top hits

e value

%identity

Alignment

AT1G73060.1 Low PSII Accumulation 3

1.7e-150

77.88

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Query:  TQRSDPKAGVPVYKPKTYEVLVSDAANSLAYALEDGKIRVEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQL
        +  SDP+ GVP+YKPK+YEVL +DAANSLA+AL+D K R+EIDFPPLPS+ISSYKGSSD+FIDANIQLA+ V R LQE   TR+CIVFPDKPEKRRASQ 
Subjt:  TQRSDPKAGVPVYKPKTYEVLVSDAANSLAYALEDGKIRVEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQL

Query:  FKTALDSIDGITVSSLDDVPAGPVTSFFRSVRNTLDFDFEDENAGRWTSTDPPSLYIFINCSTRELALIEKYVETFASSTPTLLFNLELETLRADLGLLG
        FK A DS+DGI++ SLDD+P   VT+FFRS+R+TLDFDFEDEN G W   +PP+LYIFINCSTREL+ IEK+VETFASSTP LLFNLEL+TLRADLGLLG
Subjt:  FKTALDSIDGITVSSLDDVPAGPVTSFFRSVRNTLDFDFEDENAGRWTSTDPPSLYIFINCSTRELALIEKYVETFASSTPTLLFNLELETLRADLGLLG

Query:  FPPKDLHHRFLSQFIPVFYIRIREYSKTVAIAPYIVNYSGALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRG
        FPPKDLH+RFLSQFIPVFYIR REYSKTVA+AP+++NY+GALFR YPGPWQVMLKQ D S+AC+AES TRFTLGETK+ELL+VLGLQEE+GSSLEFLRRG
Subjt:  FPPKDLHHRFLSQFIPVFYIRIREYSKTVAIAPYIVNYSGALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRG

Query:  YKAATWWEEDVDSELSSAWRN
        YK+ATWWEEDV+ E SS WRN
Subjt:  YKAATWWEEDVDSELSSAWRN

AT5G48790.1 Domain of unknown function (DUF1995)

5.4e-11

24.93

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Query:  SSSFSALRRCTPSSLSAAQTFASSRFCFRIHCTD----------KERAAPVTQRSDPKAGVP-VYKPKTYEVLVSDAANSLAYALEDGKIRVEIDFPPLP
        S SFS     +P+SL+      S      +H  +          K RA  V+   +    V  V  P+ Y  L++ A  ++  AL+D K  +EI+FP   
Subjt:  SSSFSALRRCTPSSLSAAQTFASSRFCFRIHCTD----------KERAAPVTQRSDPKAGVP-VYKPKTYEVLVSDAANSLAYALEDGKIRVEIDFPPLP

Query:  SNISSYKGSSD---EFIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQ-LFKTALDSIDGITVSSLDDVPAGPVTSFFRSVRNTLDFDFED--E
        S ++S  G  +   E  ++   +     R L   +   + I FP+  E + A + +F      +D +T  SL +                 DF F +  +
Subjt:  SNISSYKGSSD---EFIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQ-LFKTALDSIDGITVSSLDDVPAGPVTSFFRSVRNTLDFDFED--E

Query:  NAGRWTSTDPPSLYIFINCSTRELALIEKYVETFASST--PTLLFNLELETLRADLGLLGFPPKDLHHRFLSQFIPVFYIRIREYSKT----VAIAPYIV
         A R    D   L  +   +  E+ ++E+  +    +T    ++FN EL+ +R+     G+ PK             FY ++   +KT    +    YI 
Subjt:  NAGRWTSTDPPSLYIFINCSTRELALIEKYVETFASST--PTLLFNLELETLRADLGLLGFPPKDLHHRFLSQFIPVFYIRIREYSKT----VAIAPYIV

Query:  NY----SGALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELL
        N+     G LFR YPGPWQV L++  N Y C+ + E+  +L E   ++L
Subjt:  NY----SGALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELL

Sequences

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CDS sequence

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ATGGCGATCATGGCGTTTCTCTCCTCACCACTGCACAGTCCCTCTCTAATCCGAAACAAATTTCTCCTCTCTCCACTTTCTTCTTCTTCCTTCAGTGCTCTACGGCGTTG
TACTCCATCCAGTTTATCTGCCGCTCAAACTTTCGCGAGTTCGAGATTTTGCTTTAGGATACACTGCACTGATAAAGAACGAGCTGCACCGGTTACTCAGCGTTCCGATC
CTAAGGCTGGAGTCCCGGTTTATAAGCCTAAAACCTACGAGGTTCTAGTCTCCGATGCCGCGAATTCGCTTGCCTATGCTCTGGAAGATGGAAAGATCCGCGTGGAGATT
GATTTTCCTCCCCTGCCTAGCAACATTTCCTCGTATAAGGGATCTTCAGATGAGTTCATCGATGCCAATATTCAACTTGCCCTGGCTGTTGCAAGGAATCTTCAAGAAAA
TAGAGGAACTAGATCTTGCATTGTGTTTCCAGATAAGCCAGAGAAGCGTAGAGCTTCACAGCTATTCAAAACAGCTCTTGACTCGATTGATGGAATAACTGTAAGTTCCC
TGGATGATGTGCCTGCTGGACCTGTCACATCCTTCTTTAGATCTGTTAGAAACACCCTTGATTTTGATTTTGAAGATGAGAATGCAGGTCGTTGGACATCTACTGACCCT
CCATCACTGTACATATTTATTAATTGTAGCACGCGTGAACTTGCTTTGATAGAGAAGTATGTGGAAACTTTTGCTTCGTCAACACCCACCCTGCTTTTTAATCTAGAACT
TGAAACCTTGCGTGCAGACTTGGGCTTACTGGGATTCCCTCCCAAAGATTTGCACCATCGATTTCTCTCTCAGTTCATCCCAGTGTTCTATATTCGAATCAGAGAGTACT
CTAAGACAGTAGCAATAGCACCTTATATTGTTAATTACAGTGGAGCACTGTTTCGTCTATACCCTGGGCCTTGGCAAGTGATGCTAAAACAAGCAGATAATTCTTATGCT
TGCATTGCAGAGAGTGAGACAAGGTTCACCCTTGGTGAAACAAAAGATGAGCTATTAAGGGTCCTTGGACTACAGGAGGAACAAGGAAGCTCATTAGAATTTCTCCGCAG
AGGCTACAAGGCTGCCACTTGGTGGGAAGAAGATGTTGACTCTGAACTATCTTCGGCATGGCGTAATGGCCTCTTTCTAAGACTCTCATGGCTTTCTCTTGAACAGTCAC
TGCAGGGAAACTTCTATCTTAAAACTACATCTCTATTCAATCCACCTGCTTCAGAAGACTGA

mRNA sequence

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Protein sequence

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MAIMAFLSSPLHSPSLIRNKFLLSPLSSSSFSALRRCTPSSLSAAQTFASSRFCFRIHCTDKERAAPVTQRSDPKAGVPVYKPKTYEVLVSDAANSLAYALEDGKIRVEI
DFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGPVTSFFRSVRNTLDFDFEDENAGRWTSTDP
PSLYIFINCSTRELALIEKYVETFASSTPTLLFNLELETLRADLGLLGFPPKDLHHRFLSQFIPVFYIRIREYSKTVAIAPYIVNYSGALFRLYPGPWQVMLKQADNSYA
CIAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSELSSAWRNGLFLRLSWLSLEQSLQGNFYLKTTSLFNPPASED

Moc09g04490 (gene) of Bitter gourd (OHB3-1) v2 genome