; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc09g04870 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g04870
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCR4-NOT transcription complex subunit like
Genome locationchr9:3722350..3724141
RNA-Seq ExpressionMoc09g04870
SyntenyMoc09g04870
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593336.1 hypothetical protein SDJN03_12812, partial [Cucurbita argyrosperma subsp. sororia]4.8e-3970.63Show/hide
Query:  MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKE-----EATGDAQGPPFLTILAGFFV
        MAS+FAAPPSQ++L S R S + +A LPSIVGVK H +GFP+PSFR+++TKGLEL QRSFSITASNSSDGNS KE     + TGDAQGPPFLTILAGFFV
Subjt:  MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKE-----EATGDAQGPPFLTILAGFFV

Query:  FSLIIWMISSAFTSLIGLVVKLIPAK
        FSL++W++SS+ T+LI LVVKLI  K
Subjt:  FSLIIWMISSAFTSLIGLVVKLIPAK

KAG7025683.1 hypothetical protein SDJN02_12181 [Cucurbita argyrosperma subsp. argyrosperma]2.4e-3869.84Show/hide
Query:  MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKE-----EATGDAQGPPFLTILAGFFV
        MAS+FAAPPSQ++L S R S + +A LPSIVGVK H +GFP+PSFR+++TKGLEL QRSFSITASNSSDGNS KE     + T DAQGPPFLTILAGFFV
Subjt:  MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKE-----EATGDAQGPPFLTILAGFFV

Query:  FSLIIWMISSAFTSLIGLVVKLIPAK
        FSL++W++SS+ T+LI LVVKLI  K
Subjt:  FSLIIWMISSAFTSLIGLVVKLIPAK

XP_022145635.1 uncharacterized protein LOC111015032 [Momordica charantia]1.5e-56100Show/hide
Query:  MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKEEATGDAQGPPFLTILAGFFVFSLII
        MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKEEATGDAQGPPFLTILAGFFVFSLII
Subjt:  MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKEEATGDAQGPPFLTILAGFFVFSLII

Query:  WMISSAFTSLIGLVVKLIPAK
        WMISSAFTSLIGLVVKLIPAK
Subjt:  WMISSAFTSLIGLVVKLIPAK

XP_022959607.1 uncharacterized protein LOC111460632 [Cucurbita moschata]5.3e-3869.84Show/hide
Query:  MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKE-----EATGDAQGPPFLTILAGFFV
        MAS+FAAPPSQL L S R S + +A LPSIVGVK H +GFP+PSFR+++TKGL+L QRSFSITASNSSDGNS KE     + TGDAQGPPFLTILAGFFV
Subjt:  MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKE-----EATGDAQGPPFLTILAGFFV

Query:  FSLIIWMISSAFTSLIGLVVKLIPAK
        FSL++W++SS+ T+LI L VKLI  K
Subjt:  FSLIIWMISSAFTSLIGLVVKLIPAK

XP_023004845.1 uncharacterized protein LOC111498025 [Cucurbita maxima]6.2e-3971.43Show/hide
Query:  MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKEE-----ATGDAQGPPFLTILAGFFV
        MAS+FAAPPSQL L S R S + +A LPSIVGVK H +GFP+PSFR+++TKGL+L QRSFSITASNSSDGNS KEE      TGDAQGPPFLTILAGFFV
Subjt:  MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKEE-----ATGDAQGPPFLTILAGFFV

Query:  FSLIIWMISSAFTSLIGLVVKLIPAK
        FSL++W++SS+ T+LI LVVKLI  K
Subjt:  FSLIIWMISSAFTSLIGLVVKLIPAK

TrEMBL top hitse value%identityAlignment
A0A6J1CV15 uncharacterized protein LOC1110150327.1e-57100Show/hide
Query:  MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKEEATGDAQGPPFLTILAGFFVFSLII
        MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKEEATGDAQGPPFLTILAGFFVFSLII
Subjt:  MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKEEATGDAQGPPFLTILAGFFVFSLII

Query:  WMISSAFTSLIGLVVKLIPAK
        WMISSAFTSLIGLVVKLIPAK
Subjt:  WMISSAFTSLIGLVVKLIPAK

A0A6J1GPL5 uncharacterized protein LOC1114559843.7e-3771.43Show/hide
Query:  MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKEE-----ATGDAQGPPFLTILAGFFV
        MASIF+APPS+LNL SR S  +   L  SI G++ HS+ FP+PSFR+R+TKGLEL QRSFSITASNSSDGNSIKEE     A+ DAQGPPFLTILAG FV
Subjt:  MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKEE-----ATGDAQGPPFLTILAGFFV

Query:  FSLIIWMISSAFTSLIGLVVKLIPAK
        FSL++WM+SSA TSLIGLVVKLI  K
Subjt:  FSLIIWMISSAFTSLIGLVVKLIPAK

A0A6J1H506 uncharacterized protein LOC1114606322.6e-3869.84Show/hide
Query:  MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKE-----EATGDAQGPPFLTILAGFFV
        MAS+FAAPPSQL L S R S + +A LPSIVGVK H +GFP+PSFR+++TKGL+L QRSFSITASNSSDGNS KE     + TGDAQGPPFLTILAGFFV
Subjt:  MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKE-----EATGDAQGPPFLTILAGFFV

Query:  FSLIIWMISSAFTSLIGLVVKLIPAK
        FSL++W++SS+ T+LI L VKLI  K
Subjt:  FSLIIWMISSAFTSLIGLVVKLIPAK

A0A6J1JUC2 uncharacterized protein LOC1114884363.1e-3672.36Show/hide
Query:  MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKEE-----ATGDAQGPPFLTILAGFFV
        MASIFAAPPS+LNL SR S  +   L  SI G++ HS+ FP+PSFR+R+TKGLELS RSFSITASNSSDGNSI+EE     A+ DAQGPPFLTILAG FV
Subjt:  MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKEE-----ATGDAQGPPFLTILAGFFV

Query:  FSLIIWMISSAFTSLIGLVVKLI
        FSL++WM+SSA TSLIGLVVKLI
Subjt:  FSLIIWMISSAFTSLIGLVVKLI

A0A6J1KVQ7 uncharacterized protein LOC1114980253.0e-3971.43Show/hide
Query:  MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKEE-----ATGDAQGPPFLTILAGFFV
        MAS+FAAPPSQL L S R S + +A LPSIVGVK H +GFP+PSFR+++TKGL+L QRSFSITASNSSDGNS KEE      TGDAQGPPFLTILAGFFV
Subjt:  MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKEE-----ATGDAQGPPFLTILAGFFV

Query:  FSLIIWMISSAFTSLIGLVVKLIPAK
        FSL++W++SS+ T+LI LVVKLI  K
Subjt:  FSLIIWMISSAFTSLIGLVVKLIPAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCGATCTTCGCCGCGCCGCCGTCTCAACTGAATCTCTGTTCTCGCCGCTCAAGTTCGAATCGCAGAGCCCTTCTCCCCTCCATTGTCGGCGTTAAACTTCACTC
GAGCGGCTTTCCAGTTCCTTCTTTCAGGTTCAGGCACACCAAAGGATTGGAATTAAGCCAAAGATCTTTTTCTATAACAGCATCAAATTCCTCAGATGGGAATTCCATTA
AGGAGGAAGCAACTGGTGATGCCCAAGGTCCTCCATTTCTTACCATTTTGGCTGGATTTTTTGTCTTCTCCCTCATAATTTGGATGATCAGTTCTGCTTTCACGTCACTT
ATAGGACTAGTCGTCAAGCTGATCCCGGCAAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCGATCTTCGCCGCGCCGCCGTCTCAACTGAATCTCTGTTCTCGCCGCTCAAGTTCGAATCGCAGAGCCCTTCTCCCCTCCATTGTCGGCGTTAAACTTCACTC
GAGCGGCTTTCCAGTTCCTTCTTTCAGGTTCAGGCACACCAAAGGATTGGAATTAAGCCAAAGATCTTTTTCTATAACAGCATCAAATTCCTCAGATGGGAATTCCATTA
AGGAGGAAGCAACTGGTGATGCCCAAGGTCCTCCATTTCTTACCATTTTGGCTGGATTTTTTGTCTTCTCCCTCATAATTTGGATGATCAGTTCTGCTTTCACGTCACTT
ATAGGACTAGTCGTCAAGCTGATCCCGGCAAAGTAA
Protein sequenceShow/hide protein sequence
MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSFSITASNSSDGNSIKEEATGDAQGPPFLTILAGFFVFSLIIWMISSAFTSL
IGLVVKLIPAK