; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc09g05220 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g05220
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionE3 ubiquitin ligase BIG BROTHER
Genome locationchr9:4017976..4020450
RNA-Seq ExpressionMoc09g05220
SyntenyMoc09g05220
Gene Ontology termsGO:0008285 - negative regulation of cell population proliferation (biological process)
GO:0046621 - negative regulation of organ growth (biological process)
GO:0048437 - floral organ development (biological process)
GO:0051865 - protein autoubiquitination (biological process)
GO:1900057 - positive regulation of leaf senescence (biological process)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
GO:0031624 - ubiquitin conjugating enzyme binding (molecular function)
InterPro domainsIPR033276 - E3 ubiquitin-protein ligase BIG BROTHER


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK10442.1 E3 ubiquitin ligase BIG BROTHER isoform X1 [Cucumis melo var. makuwa]1.5e-8975.97Show/hide
Query:  MDFFEGLHHHQVPAYGNAGPLLDQGNAYWSMNMQCYKFGVSDPGNTYYGHSEESHHLPPSMDIGERGWEYP-STVTVENPEPTYAPSVEEDVVDAHFIPE
        MDFF+GLH HQVPAYGNA PLLDQGNAYWSMNMQCYKFGVSD GNTYYGHSEESHHLPPSMD+GER WEYP S V VE PEP+YAPSVEEDVVDAH IP 
Subjt:  MDFFEGLHHHQVPAYGNAGPLLDQGNAYWSMNMQCYKFGVSDPGNTYYGHSEESHHLPPSMDIGERGWEYP-STVTVENPEPTYAPSVEEDVVDAHFIPE

Query:  EECDFSHQEEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTQSRGLSEEQISLLPTAKCKLTSFFSRKKPEERLVLSRYGIYIQDLGLILIVLVSFRLQ
        EECD SH+ EETSTSQV+WQDEIDPDHMTYEELLDLGESVGT+SRGLSEEQISLLPTA+CKLTSFFSRKK +ER V+ +   Y +    I +    F   
Subjt:  EECDFSHQEEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTQSRGLSEEQISLLPTAKCKLTSFFSRKKPEERLVLSRYGIYIQDLGLILIVLVSFRLQ

Query:  MCDLP----NEICPICNIEVFGDEGVNASGSDN
         C       N+ICPICNIEVFGD   NAS SDN
Subjt:  MCDLP----NEICPICNIEVFGDEGVNASGSDN

XP_008461282.1 PREDICTED: E3 ubiquitin ligase BIG BROTHER isoform X1 [Cucumis melo]3.3e-8975.97Show/hide
Query:  MDFFEGLHHHQVPAYGNAGPLLDQGNAYWSMNMQCYKFGVSDPGNTYYGHSEESHHLPPSMDIGERGWEYP-STVTVENPEPTYAPSVEEDVVDAHFIPE
        MDFF+GLH HQVPAYGNA PLLDQGNAYWSMNMQCYKFGVSD GNTYYGHSEESHHLPPSMD+GER WEYP S V VE PEP+YAPSVEEDVVDAH IP 
Subjt:  MDFFEGLHHHQVPAYGNAGPLLDQGNAYWSMNMQCYKFGVSDPGNTYYGHSEESHHLPPSMDIGERGWEYP-STVTVENPEPTYAPSVEEDVVDAHFIPE

Query:  EECDFSHQEEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTQSRGLSEEQISLLPTAKCKLTSFFSRKKPEERLVLSRYGIYIQDLGLILIVLVSFRLQ
        EECD SH+ EETSTSQV WQDEIDPDHMTYEELLDLGESVGT+SRGLSEEQISLLPTA+CKLTSFFSRKK +ER V+ +   Y +    I +    F   
Subjt:  EECDFSHQEEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTQSRGLSEEQISLLPTAKCKLTSFFSRKKPEERLVLSRYGIYIQDLGLILIVLVSFRLQ

Query:  MCDLP----NEICPICNIEVFGDEGVNASGSDN
         C       N+ICPICNIEVFGD   NAS SDN
Subjt:  MCDLP----NEICPICNIEVFGDEGVNASGSDN

XP_008461284.1 PREDICTED: E3 ubiquitin ligase BIG BROTHER isoform X2 [Cucumis melo]3.3e-8975.97Show/hide
Query:  MDFFEGLHHHQVPAYGNAGPLLDQGNAYWSMNMQCYKFGVSDPGNTYYGHSEESHHLPPSMDIGERGWEYP-STVTVENPEPTYAPSVEEDVVDAHFIPE
        MDFF+GLH HQVPAYGNA PLLDQGNAYWSMNMQCYKFGVSD GNTYYGHSEESHHLPPSMD+GER WEYP S V VE PEP+YAPSVEEDVVDAH IP 
Subjt:  MDFFEGLHHHQVPAYGNAGPLLDQGNAYWSMNMQCYKFGVSDPGNTYYGHSEESHHLPPSMDIGERGWEYP-STVTVENPEPTYAPSVEEDVVDAHFIPE

Query:  EECDFSHQEEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTQSRGLSEEQISLLPTAKCKLTSFFSRKKPEERLVLSRYGIYIQDLGLILIVLVSFRLQ
        EECD SH+ EETSTSQV WQDEIDPDHMTYEELLDLGESVGT+SRGLSEEQISLLPTA+CKLTSFFSRKK +ER V+ +   Y +    I +    F   
Subjt:  EECDFSHQEEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTQSRGLSEEQISLLPTAKCKLTSFFSRKKPEERLVLSRYGIYIQDLGLILIVLVSFRLQ

Query:  MCDLP----NEICPICNIEVFGDEGVNASGSDN
         C       N+ICPICNIEVFGD   NAS SDN
Subjt:  MCDLP----NEICPICNIEVFGDEGVNASGSDN

XP_022148735.1 E3 ubiquitin ligase BIG BROTHER [Momordica charantia]5.7e-11086.75Show/hide
Query:  MDFFEGLHHHQVPAYGNAGPLLDQGNAYWSMNMQCYKFGVSDPGNTYYGHSEESHHLPPSMDIGERGWEYPSTVTVENPEPTYAPSVEEDVVDAHFIPEE
        MDFFEGLHHHQVPAYGNAGPLLDQGNAYWSMNMQCYKFGVSDPGNTYYGHSEESHHLPPSMDIGERGWEYPSTVTVENPEPTYAPSVEEDVVDAHFIPEE
Subjt:  MDFFEGLHHHQVPAYGNAGPLLDQGNAYWSMNMQCYKFGVSDPGNTYYGHSEESHHLPPSMDIGERGWEYPSTVTVENPEPTYAPSVEEDVVDAHFIPEE

Query:  ECDFSHQEEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTQSRGLSEEQISLLPTAKCKLTSFFSRKKPEERLVLSRYGIYIQDLGLILIVLVSFRLQM
        ECDFSHQEEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTQSRGLSEEQISLLPTAKCKLTSFFSRKKPEER V+ +   Y +    I +    F    
Subjt:  ECDFSHQEEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTQSRGLSEEQISLLPTAKCKLTSFFSRKKPEERLVLSRYGIYIQDLGLILIVLVSFRLQM

Query:  CDLP----NEICPICNIEVFGDEGVNASGSDNRQ
        C       N+ICPICNIEVFGDEGVNASGSDNRQ
Subjt:  CDLP----NEICPICNIEVFGDEGVNASGSDNRQ

XP_038899262.1 E3 ubiquitin-protein ligase BIG BROTHER [Benincasa hispida]3.2e-9277.45Show/hide
Query:  MDFFEGLHHHQVPAYGNAGPLLDQGNAYWSMNMQCYKFGVSDPGNTYYGHSEESHHLPPSMDIGERGWEYPSTV-TVENPEPTYAPSVEEDVVDAHFIPE
        MDFFEGLH HQVPAYGNA PLLDQGNAYWSMNMQCYKFGVSD GNTYYGHSEESHHLPPSMD+GER WEYP++V  VE PEPTYAPSVEEDVVDAH IP 
Subjt:  MDFFEGLHHHQVPAYGNAGPLLDQGNAYWSMNMQCYKFGVSDPGNTYYGHSEESHHLPPSMDIGERGWEYPSTV-TVENPEPTYAPSVEEDVVDAHFIPE

Query:  EECDFSHQEEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTQSRGLSEEQISLLPTAKCKLTSFFSRKKPEERLVLSRYGIYIQDLGLILIVLVSFRLQ
        EECD SHQ EETSTSQV WQDEIDPDHMTYEELLDLGESVGT+SRGLSEEQISLLPTA+ KLTSFFSRKKPEER V+ +   Y +    I +    F   
Subjt:  EECDFSHQEEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTQSRGLSEEQISLLPTAKCKLTSFFSRKKPEERLVLSRYGIYIQDLGLILIVLVSFRLQ

Query:  MCDLP----NEICPICNIEVFGDEGVNASGSDNRQ
         C       N+ICPICNIEVFGD  +NASG+DNRQ
Subjt:  MCDLP----NEICPICNIEVFGDEGVNASGSDNRQ

TrEMBL top hitse value%identityAlignment
A0A0A0K8C4 RING-type domain-containing protein3.5e-8975.54Show/hide
Query:  MDFFEGLHHHQVPAYGNAGPLLDQGNAYWSMNMQCYKFGVSDPGNTYYGHSEESHHLPPSMDIGERGWEYP-STVTVENPEPTYAPSVEEDVVDAHFIPE
        MDFF+GLH HQVPAYGNA PLLDQGNAYWSMNMQCYKFGVSD GNTYYGHSEESHHLPPSMD+GER WEYP S + VE PEP+YAPSVEEDVVDAH IP 
Subjt:  MDFFEGLHHHQVPAYGNAGPLLDQGNAYWSMNMQCYKFGVSDPGNTYYGHSEESHHLPPSMDIGERGWEYP-STVTVENPEPTYAPSVEEDVVDAHFIPE

Query:  EECDFSHQEEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTQSRGLSEEQISLLPTAKCKLTSFFSRKKPEERLVLSRYGIYIQDLGLILIVLVSFRLQ
        EECD SH+ EETSTSQV WQDEIDPDHMTYEELLDLGESVGT+SRGLSEEQISLLPTA+CKLTSFFSRKK +ER V+ +   Y +    I +    F   
Subjt:  EECDFSHQEEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTQSRGLSEEQISLLPTAKCKLTSFFSRKKPEERLVLSRYGIYIQDLGLILIVLVSFRLQ

Query:  MCDLP----NEICPICNIEVFGDEGVNASGSDN
         C       N+ICPICNIEVFGD   NAS SDN
Subjt:  MCDLP----NEICPICNIEVFGDEGVNASGSDN

A0A1S3CED1 E3 ubiquitin ligase BIG BROTHER isoform X11.6e-8975.97Show/hide
Query:  MDFFEGLHHHQVPAYGNAGPLLDQGNAYWSMNMQCYKFGVSDPGNTYYGHSEESHHLPPSMDIGERGWEYP-STVTVENPEPTYAPSVEEDVVDAHFIPE
        MDFF+GLH HQVPAYGNA PLLDQGNAYWSMNMQCYKFGVSD GNTYYGHSEESHHLPPSMD+GER WEYP S V VE PEP+YAPSVEEDVVDAH IP 
Subjt:  MDFFEGLHHHQVPAYGNAGPLLDQGNAYWSMNMQCYKFGVSDPGNTYYGHSEESHHLPPSMDIGERGWEYP-STVTVENPEPTYAPSVEEDVVDAHFIPE

Query:  EECDFSHQEEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTQSRGLSEEQISLLPTAKCKLTSFFSRKKPEERLVLSRYGIYIQDLGLILIVLVSFRLQ
        EECD SH+ EETSTSQV WQDEIDPDHMTYEELLDLGESVGT+SRGLSEEQISLLPTA+CKLTSFFSRKK +ER V+ +   Y +    I +    F   
Subjt:  EECDFSHQEEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTQSRGLSEEQISLLPTAKCKLTSFFSRKKPEERLVLSRYGIYIQDLGLILIVLVSFRLQ

Query:  MCDLP----NEICPICNIEVFGDEGVNASGSDN
         C       N+ICPICNIEVFGD   NAS SDN
Subjt:  MCDLP----NEICPICNIEVFGDEGVNASGSDN

A0A1S3CES7 E3 ubiquitin ligase BIG BROTHER isoform X21.6e-8975.97Show/hide
Query:  MDFFEGLHHHQVPAYGNAGPLLDQGNAYWSMNMQCYKFGVSDPGNTYYGHSEESHHLPPSMDIGERGWEYP-STVTVENPEPTYAPSVEEDVVDAHFIPE
        MDFF+GLH HQVPAYGNA PLLDQGNAYWSMNMQCYKFGVSD GNTYYGHSEESHHLPPSMD+GER WEYP S V VE PEP+YAPSVEEDVVDAH IP 
Subjt:  MDFFEGLHHHQVPAYGNAGPLLDQGNAYWSMNMQCYKFGVSDPGNTYYGHSEESHHLPPSMDIGERGWEYP-STVTVENPEPTYAPSVEEDVVDAHFIPE

Query:  EECDFSHQEEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTQSRGLSEEQISLLPTAKCKLTSFFSRKKPEERLVLSRYGIYIQDLGLILIVLVSFRLQ
        EECD SH+ EETSTSQV WQDEIDPDHMTYEELLDLGESVGT+SRGLSEEQISLLPTA+CKLTSFFSRKK +ER V+ +   Y +    I +    F   
Subjt:  EECDFSHQEEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTQSRGLSEEQISLLPTAKCKLTSFFSRKKPEERLVLSRYGIYIQDLGLILIVLVSFRLQ

Query:  MCDLP----NEICPICNIEVFGDEGVNASGSDN
         C       N+ICPICNIEVFGD   NAS SDN
Subjt:  MCDLP----NEICPICNIEVFGDEGVNASGSDN

A0A5D3CGQ8 E3 ubiquitin ligase BIG BROTHER isoform X17.1e-9075.97Show/hide
Query:  MDFFEGLHHHQVPAYGNAGPLLDQGNAYWSMNMQCYKFGVSDPGNTYYGHSEESHHLPPSMDIGERGWEYP-STVTVENPEPTYAPSVEEDVVDAHFIPE
        MDFF+GLH HQVPAYGNA PLLDQGNAYWSMNMQCYKFGVSD GNTYYGHSEESHHLPPSMD+GER WEYP S V VE PEP+YAPSVEEDVVDAH IP 
Subjt:  MDFFEGLHHHQVPAYGNAGPLLDQGNAYWSMNMQCYKFGVSDPGNTYYGHSEESHHLPPSMDIGERGWEYP-STVTVENPEPTYAPSVEEDVVDAHFIPE

Query:  EECDFSHQEEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTQSRGLSEEQISLLPTAKCKLTSFFSRKKPEERLVLSRYGIYIQDLGLILIVLVSFRLQ
        EECD SH+ EETSTSQV+WQDEIDPDHMTYEELLDLGESVGT+SRGLSEEQISLLPTA+CKLTSFFSRKK +ER V+ +   Y +    I +    F   
Subjt:  EECDFSHQEEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTQSRGLSEEQISLLPTAKCKLTSFFSRKKPEERLVLSRYGIYIQDLGLILIVLVSFRLQ

Query:  MCDLP----NEICPICNIEVFGDEGVNASGSDN
         C       N+ICPICNIEVFGD   NAS SDN
Subjt:  MCDLP----NEICPICNIEVFGDEGVNASGSDN

A0A6J1D3R4 E3 ubiquitin ligase BIG BROTHER2.8e-11086.75Show/hide
Query:  MDFFEGLHHHQVPAYGNAGPLLDQGNAYWSMNMQCYKFGVSDPGNTYYGHSEESHHLPPSMDIGERGWEYPSTVTVENPEPTYAPSVEEDVVDAHFIPEE
        MDFFEGLHHHQVPAYGNAGPLLDQGNAYWSMNMQCYKFGVSDPGNTYYGHSEESHHLPPSMDIGERGWEYPSTVTVENPEPTYAPSVEEDVVDAHFIPEE
Subjt:  MDFFEGLHHHQVPAYGNAGPLLDQGNAYWSMNMQCYKFGVSDPGNTYYGHSEESHHLPPSMDIGERGWEYPSTVTVENPEPTYAPSVEEDVVDAHFIPEE

Query:  ECDFSHQEEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTQSRGLSEEQISLLPTAKCKLTSFFSRKKPEERLVLSRYGIYIQDLGLILIVLVSFRLQM
        ECDFSHQEEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTQSRGLSEEQISLLPTAKCKLTSFFSRKKPEER V+ +   Y +    I +    F    
Subjt:  ECDFSHQEEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTQSRGLSEEQISLLPTAKCKLTSFFSRKKPEERLVLSRYGIYIQDLGLILIVLVSFRLQM

Query:  CDLP----NEICPICNIEVFGDEGVNASGSDNRQ
        C       N+ICPICNIEVFGDEGVNASGSDNRQ
Subjt:  CDLP----NEICPICNIEVFGDEGVNASGSDNRQ

SwissProt top hitse value%identityAlignment
Q8L649 E3 ubiquitin-protein ligase BIG BROTHER2.0e-3342.29Show/hide
Query:  MDFFEGLHHHQVPAYGNAGPLLDQGNAYWSMNMQCYKFGVSDPGN-TYYGHSEESHHLPPSMDIGERGWEYPSTVTV-ENPEPTYAPSVEEDVVDAHFIP
        MDF+ G     +  Y +A  +  Q N YW+MN   YKFG S   N ++YG  + + HL   M IG   W+Y   V V ++PE T A SV+    D H   
Subjt:  MDFFEGLHHHQVPAYGNAGPLLDQGNAYWSMNMQCYKFGVSDPGN-TYYGHSEESHHLPPSMDIGERGWEYPSTVTV-ENPEPTYAPSVEEDVVDAHFIP

Query:  EEECDFSHQEEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTQSRGLSEEQISLLPTAKCKLTSFFSRKKPEERLVLS--RYGIYIQDLGL-ILIVLVS
         EEC     E +  + QV WQD+IDPD MTYEEL++LGE+VGT+SRGLS+E I  LPT K K  S FSRK+  ER V+   +Y I  + + L    V  S
Subjt:  EEECDFSHQEEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTQSRGLSEEQISLLPTAKCKLTSFFSRKKPEERLVLS--RYGIYIQDLGL-ILIVLVS

Query:  FRLQMCDLPNEICPICNIEVFGDEGVN
          +      N++CP+CN EVFG+  ++
Subjt:  FRLQMCDLPNEICPICNIEVFGDEGVN

Q9LT17 E3 ubiquitin ligase BIG BROTHER-related7.0e-1040.18Show/hide
Query:  EEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTQSRGLSEEQISLLPTAKCKLTSFFSRKKPEERLVLSRYGIYIQDLGLILIVLVSFRLQMCD----L
        E+E+ TSQ  W DE+DPD ++YEELL LG+ VGT+SRGLS + I+ LP+ + K     ++    E  V+ R   Y  D  LIL+         C      
Subjt:  EEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTQSRGLSEEQISLLPTAKCKLTSFFSRKKPEERLVLSRYGIYIQDLGLILIVLVSFRLQMCD----L

Query:  PNEICPICNIEV
         N++CP+C+ EV
Subjt:  PNEICPICNIEV

Arabidopsis top hitse value%identityAlignment
AT3G19910.1 RING/U-box superfamily protein5.0e-1140.18Show/hide
Query:  EEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTQSRGLSEEQISLLPTAKCKLTSFFSRKKPEERLVLSRYGIYIQDLGLILIVLVSFRLQMCD----L
        E+E+ TSQ  W DE+DPD ++YEELL LG+ VGT+SRGLS + I+ LP+ + K     ++    E  V+ R   Y  D  LIL+         C      
Subjt:  EEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTQSRGLSEEQISLLPTAKCKLTSFFSRKKPEERLVLSRYGIYIQDLGLILIVLVSFRLQMCD----L

Query:  PNEICPICNIEV
         N++CP+C+ EV
Subjt:  PNEICPICNIEV

AT3G47180.1 RING/U-box superfamily protein4.8e-0631.88Show/hide
Query:  VEEDVVDAHFIPEEECDFSHQEEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTQSRGLSEEQISLLPTAKCKLTSFFSRKKPE-ERLVLSRYGIYIQD
        V+ED ++  F+ ++E + + +EE+    +   +DEIDPD ++YEEL+ LG+ +G ++RGL+  +IS    A    T  FS  K E +R V+ +     ++
Subjt:  VEEDVVDAHFIPEEECDFSHQEEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTQSRGLSEEQISLLPTAKCKLTSFFSRKKPE-ERLVLSRYGIYIQD

Query:  LGLILIVLVSFRLQMCDLP------------NEICPIC
            L+V     L+ CD P             +ICPIC
Subjt:  LGLILIVLVSFRLQMCDLP------------NEICPIC

AT3G63530.1 RING/U-box superfamily protein1.4e-3442.29Show/hide
Query:  MDFFEGLHHHQVPAYGNAGPLLDQGNAYWSMNMQCYKFGVSDPGN-TYYGHSEESHHLPPSMDIGERGWEYPSTVTV-ENPEPTYAPSVEEDVVDAHFIP
        MDF+ G     +  Y +A  +  Q N YW+MN   YKFG S   N ++YG  + + HL   M IG   W+Y   V V ++PE T A SV+    D H   
Subjt:  MDFFEGLHHHQVPAYGNAGPLLDQGNAYWSMNMQCYKFGVSDPGN-TYYGHSEESHHLPPSMDIGERGWEYPSTVTV-ENPEPTYAPSVEEDVVDAHFIP

Query:  EEECDFSHQEEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTQSRGLSEEQISLLPTAKCKLTSFFSRKKPEERLVLS--RYGIYIQDLGL-ILIVLVS
         EEC     E +  + QV WQD+IDPD MTYEEL++LGE+VGT+SRGLS+E I  LPT K K  S FSRK+  ER V+   +Y I  + + L    V  S
Subjt:  EEECDFSHQEEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTQSRGLSEEQISLLPTAKCKLTSFFSRKKPEERLVLS--RYGIYIQDLGL-ILIVLVS

Query:  FRLQMCDLPNEICPICNIEVFGDEGVN
          +      N++CP+CN EVFG+  ++
Subjt:  FRLQMCDLPNEICPICNIEVFGDEGVN

AT3G63530.2 RING/U-box superfamily protein1.4e-3442.29Show/hide
Query:  MDFFEGLHHHQVPAYGNAGPLLDQGNAYWSMNMQCYKFGVSDPGN-TYYGHSEESHHLPPSMDIGERGWEYPSTVTV-ENPEPTYAPSVEEDVVDAHFIP
        MDF+ G     +  Y +A  +  Q N YW+MN   YKFG S   N ++YG  + + HL   M IG   W+Y   V V ++PE T A SV+    D H   
Subjt:  MDFFEGLHHHQVPAYGNAGPLLDQGNAYWSMNMQCYKFGVSDPGN-TYYGHSEESHHLPPSMDIGERGWEYPSTVTV-ENPEPTYAPSVEEDVVDAHFIP

Query:  EEECDFSHQEEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTQSRGLSEEQISLLPTAKCKLTSFFSRKKPEERLVLS--RYGIYIQDLGL-ILIVLVS
         EEC     E +  + QV WQD+IDPD MTYEEL++LGE+VGT+SRGLS+E I  LPT K K  S FSRK+  ER V+   +Y I  + + L    V  S
Subjt:  EEECDFSHQEEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTQSRGLSEEQISLLPTAKCKLTSFFSRKKPEERLVLS--RYGIYIQDLGL-ILIVLVS

Query:  FRLQMCDLPNEICPICNIEVFGDEGVN
          +      N++CP+CN EVFG+  ++
Subjt:  FRLQMCDLPNEICPICNIEVFGDEGVN

AT5G52140.1 RING/U-box superfamily protein1.4e-0548.21Show/hide
Query:  FSHQEEETSTSQVVWQDE-IDPDHMTYEELLDLGESVGTQSRGLSEEQISLLPTAK
        ++H    +S S     DE  DP++MTYEEL +LG+SVG   +GLS+E+IS L T K
Subjt:  FSHQEEETSTSQVVWQDE-IDPDHMTYEELLDLGESVGTQSRGLSEEQISLLPTAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTCTTTGAAGGGCTCCATCACCACCAGGTACCTGCTTATGGCAATGCTGGGCCATTGCTTGATCAGGGAAATGCATACTGGTCGATGAATATGCAATGTTACAA
ATTTGGAGTATCCGATCCCGGGAATACATATTACGGCCATTCCGAGGAAAGTCATCATTTGCCACCTTCAATGGATATTGGTGAAAGGGGGTGGGAGTATCCTTCAACCG
TGACTGTCGAAAATCCTGAACCGACGTATGCACCATCGGTGGAGGAGGATGTTGTAGATGCTCATTTTATACCCGAAGAAGAATGTGATTTCAGTCATCAAGAGGAGGAG
ACCAGTACATCTCAAGTTGTATGGCAAGATGAGATTGATCCTGATCACATGACCTATGAGGAACTATTGGACTTGGGCGAATCGGTTGGAACTCAAAGTCGGGGGCTTTC
TGAAGAACAAATAAGTCTGCTTCCGACTGCGAAATGCAAGTTAACGAGCTTTTTCTCGAGAAAAAAGCCAGAGGAAAGATTAGTACTTTCTCGGTACGGTATTTACATTC
AGGATCTCGGTTTAATATTGATTGTACTTGTTTCGTTTCGACTGCAGATGTGTGATTTGCCAAATGAGATATGTCCGATCTGCAACATCGAGGTGTTTGGAGACGAAGGC
GTGAATGCGTCTGGCAGCGATAACCGACAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATTTCTTTGAAGGGCTCCATCACCACCAGGTACCTGCTTATGGCAATGCTGGGCCATTGCTTGATCAGGGAAATGCATACTGGTCGATGAATATGCAATGTTACAA
ATTTGGAGTATCCGATCCCGGGAATACATATTACGGCCATTCCGAGGAAAGTCATCATTTGCCACCTTCAATGGATATTGGTGAAAGGGGGTGGGAGTATCCTTCAACCG
TGACTGTCGAAAATCCTGAACCGACGTATGCACCATCGGTGGAGGAGGATGTTGTAGATGCTCATTTTATACCCGAAGAAGAATGTGATTTCAGTCATCAAGAGGAGGAG
ACCAGTACATCTCAAGTTGTATGGCAAGATGAGATTGATCCTGATCACATGACCTATGAGGAACTATTGGACTTGGGCGAATCGGTTGGAACTCAAAGTCGGGGGCTTTC
TGAAGAACAAATAAGTCTGCTTCCGACTGCGAAATGCAAGTTAACGAGCTTTTTCTCGAGAAAAAAGCCAGAGGAAAGATTAGTACTTTCTCGGTACGGTATTTACATTC
AGGATCTCGGTTTAATATTGATTGTACTTGTTTCGTTTCGACTGCAGATGTGTGATTTGCCAAATGAGATATGTCCGATCTGCAACATCGAGGTGTTTGGAGACGAAGGC
GTGAATGCGTCTGGCAGCGATAACCGACAGTAG
Protein sequenceShow/hide protein sequence
MDFFEGLHHHQVPAYGNAGPLLDQGNAYWSMNMQCYKFGVSDPGNTYYGHSEESHHLPPSMDIGERGWEYPSTVTVENPEPTYAPSVEEDVVDAHFIPEEECDFSHQEEE
TSTSQVVWQDEIDPDHMTYEELLDLGESVGTQSRGLSEEQISLLPTAKCKLTSFFSRKKPEERLVLSRYGIYIQDLGLILIVLVSFRLQMCDLPNEICPICNIEVFGDEG
VNASGSDNRQ