; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc09g05280 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g05280
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionNuclear transcription factor Y subunit
Genome locationchr9:4072186..4074312
RNA-Seq ExpressionMoc09g05280
SyntenyMoc09g05280
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR001289 - Nuclear transcription factor Y subunit A
IPR018362 - CCAAT-binding factor, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004135933.1 nuclear transcription factor Y subunit A-4 isoform X1 [Cucumis sativus]2.2e-14784.06Show/hide
Query:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL
        MPS+PENVDQQV DG KY+LQSTK+SEPWWHGVGNNT  GED  +TSSA+YLNVTV+SGATQ QANDENI KEVQHLKYIPFSTSPPVGEHLDLNS MEL
Subjt:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL

Query:  VGHSIVLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHHGRMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQY QMLTSYGPQ+ LP  YGLHH RMPLPL+MEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHHGRMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNMHITHAFFDGKSNGHGLSTYNSQLSDVEGGHL
        SGGRFLNTKK NNV+SNT+ EED +S ANH TK VSEA S YM T+E G+K+T D+Q   SR FM QNM ITHAFF+GKSN HGLSTY+SQL DVEGGHL
Subjt:  SGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNMHITHAFFDGKSNGHGLSTYNSQLSDVEGGHL

Query:  GQPHESMQVNGAPQRAIPIK
         QPHESMQVNGAPQRAIPIK
Subjt:  GQPHESMQVNGAPQRAIPIK

XP_008461297.1 PREDICTED: nuclear transcription factor Y subunit A-9-like [Cucumis melo]9.7e-14884.06Show/hide
Query:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL
        MPS+PENVDQQV D  KY+LQS+KYSEPWWHGVGNNT  GED  +TSSA+YLNVTV+SGATQ QANDENI KEVQHLKYIPFSTSPPVGEHLDLNS MEL
Subjt:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL

Query:  VGHSIVLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHHGRMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQY QMLTSYGPQ+ LP  YGLHH RMPLPL+MEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHHGRMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNMHITHAFFDGKSNGHGLSTYNSQLSDVEGGHL
        SGGRFLNTKK NNV+SNT+ EED NSGANH TK VSE GS YM T E G+K+T D+Q   SR  M QNM ITHAFF+GKSN HGLSTYNSQL DVEGGHL
Subjt:  SGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNMHITHAFFDGKSNGHGLSTYNSQLSDVEGGHL

Query:  GQPHESMQVNGAPQRAIPIK
          PHESMQVNGAPQRAIPIK
Subjt:  GQPHESMQVNGAPQRAIPIK

XP_022150009.1 nuclear transcription factor Y subunit A-4-like [Momordica charantia]6.0e-182100Show/hide
Query:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL
        MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL
Subjt:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL

Query:  VGHSIVLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHHGRMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHHGRMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHHGRMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNMHITHAFFDGKSNGHGLSTYNSQLSDVEGGHL
        SGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNMHITHAFFDGKSNGHGLSTYNSQLSDVEGGHL
Subjt:  SGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNMHITHAFFDGKSNGHGLSTYNSQLSDVEGGHL

Query:  GQPHESMQVNGAPQRAIPIK
        GQPHESMQVNGAPQRAIPIK
Subjt:  GQPHESMQVNGAPQRAIPIK

XP_023547827.1 nuclear transcription factor Y subunit A-4-like isoform X2 [Cucurbita pepo subsp. pepo]2.2e-14482.13Show/hide
Query:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL
        MPSKPENVDQQ+ DG KY++QSTKYSE WWHGVGNNT  GED  +T+SADYLN TVSSG TQSQANDENI KEVQHLKYIPFSTSPPVGE LDLNS MEL
Subjt:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL

Query:  VGHSIVLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHHGRMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQY QMLTS GPQS  PH YGLHH RMPLPL+MEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHHGRMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNMHITHAFFDGKSNGHGLSTYNSQLSDVEGGHL
        SGGRFLNTKK NNVISNT  EE  NSG NH TK V+EAGS YM  DENG+KDT +++    + FM QN+ IT AFF+GK NGHG+STY SQL+DVEGGHL
Subjt:  SGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNMHITHAFFDGKSNGHGLSTYNSQLSDVEGGHL

Query:  GQPHESMQVNGAPQRAIPI
         QPHESMQVNGAPQRAIPI
Subjt:  GQPHESMQVNGAPQRAIPI

XP_038899773.1 nuclear transcription factor Y subunit A-1-like [Benincasa hispida]1.1e-14683.7Show/hide
Query:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL
        MPSKPENVDQQV DG KY+LQSTKYSEPWWHGVGNNT +GED  +TSSA+YLNVTV+SGATQSQANDENI KEVQHLKYIPFSTSPPVGEHLD NS MEL
Subjt:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL

Query:  VGHSIVLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHHGRMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQY QMLTSYGPQS LPH YGLHH RMPLPL+MEEEPVYVNAKQYHGILRRRQSRAKAELEKKVI+SRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHHGRMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNMHITHAFFDGKSNGHGLSTYNSQLSDVEGGHL
        SGGRFLNTKK NNVISNT+ EED NS ANH TK VS A   Y   DEN +KDT ++ +E     M  NM ITHAFF+GKSN HGLSTYNSQL+DVEGGHL
Subjt:  SGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNMHITHAFFDGKSNGHGLSTYNSQLSDVEGGHL

Query:  GQPHESMQVNGAPQRAIPI
         QPHESMQVNGAPQRAIPI
Subjt:  GQPHESMQVNGAPQRAIPI

TrEMBL top hitse value%identityAlignment
A0A0A0K612 Nuclear transcription factor Y subunit1.0e-14784.06Show/hide
Query:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL
        MPS+PENVDQQV DG KY+LQSTK+SEPWWHGVGNNT  GED  +TSSA+YLNVTV+SGATQ QANDENI KEVQHLKYIPFSTSPPVGEHLDLNS MEL
Subjt:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL

Query:  VGHSIVLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHHGRMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQY QMLTSYGPQ+ LP  YGLHH RMPLPL+MEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHHGRMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNMHITHAFFDGKSNGHGLSTYNSQLSDVEGGHL
        SGGRFLNTKK NNV+SNT+ EED +S ANH TK VSEA S YM T+E G+K+T D+Q   SR FM QNM ITHAFF+GKSN HGLSTY+SQL DVEGGHL
Subjt:  SGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNMHITHAFFDGKSNGHGLSTYNSQLSDVEGGHL

Query:  GQPHESMQVNGAPQRAIPIK
         QPHESMQVNGAPQRAIPIK
Subjt:  GQPHESMQVNGAPQRAIPIK

A0A1S3CED9 Nuclear transcription factor Y subunit4.7e-14884.06Show/hide
Query:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL
        MPS+PENVDQQV D  KY+LQS+KYSEPWWHGVGNNT  GED  +TSSA+YLNVTV+SGATQ QANDENI KEVQHLKYIPFSTSPPVGEHLDLNS MEL
Subjt:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL

Query:  VGHSIVLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHHGRMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQY QMLTSYGPQ+ LP  YGLHH RMPLPL+MEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHHGRMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNMHITHAFFDGKSNGHGLSTYNSQLSDVEGGHL
        SGGRFLNTKK NNV+SNT+ EED NSGANH TK VSE GS YM T E G+K+T D+Q   SR  M QNM ITHAFF+GKSN HGLSTYNSQL DVEGGHL
Subjt:  SGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNMHITHAFFDGKSNGHGLSTYNSQLSDVEGGHL

Query:  GQPHESMQVNGAPQRAIPIK
          PHESMQVNGAPQRAIPIK
Subjt:  GQPHESMQVNGAPQRAIPIK

A0A5D3CGW1 Nuclear transcription factor Y subunit4.7e-14884.06Show/hide
Query:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL
        MPS+PENVDQQV D  KY+LQS+KYSEPWWHGVGNNT  GED  +TSSA+YLNVTV+SGATQ QANDENI KEVQHLKYIPFSTSPPVGEHLDLNS MEL
Subjt:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL

Query:  VGHSIVLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHHGRMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQY QMLTSYGPQ+ LP  YGLHH RMPLPL+MEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHHGRMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNMHITHAFFDGKSNGHGLSTYNSQLSDVEGGHL
        SGGRFLNTKK NNV+SNT+ EED NSGANH TK VSE GS YM T E G+K+T D+Q   SR  M QNM ITHAFF+GKSN HGLSTYNSQL DVEGGHL
Subjt:  SGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNMHITHAFFDGKSNGHGLSTYNSQLSDVEGGHL

Query:  GQPHESMQVNGAPQRAIPIK
          PHESMQVNGAPQRAIPIK
Subjt:  GQPHESMQVNGAPQRAIPIK

A0A6J1D8S0 Nuclear transcription factor Y subunit2.9e-182100Show/hide
Query:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL
        MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL
Subjt:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL

Query:  VGHSIVLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHHGRMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHHGRMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHHGRMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNMHITHAFFDGKSNGHGLSTYNSQLSDVEGGHL
        SGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNMHITHAFFDGKSNGHGLSTYNSQLSDVEGGHL
Subjt:  SGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNMHITHAFFDGKSNGHGLSTYNSQLSDVEGGHL

Query:  GQPHESMQVNGAPQRAIPIK
        GQPHESMQVNGAPQRAIPIK
Subjt:  GQPHESMQVNGAPQRAIPIK

A0A6J1GNB7 Nuclear transcription factor Y subunit2.7e-14381.82Show/hide
Query:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL
        MPSKPENVDQQ+ DG KY++QSTKYS  WW+GVGNNT  GED  +T+SADYLN TVSSG TQSQ NDENI KEVQHLKYIPFS SPPVGE LDLNS MEL
Subjt:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL

Query:  VGHSIVLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHHGRMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQY QMLTS GPQS  PH YGLHH RMPLPL+MEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHHGRMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNMHITHAFFDGKSNGHGLSTYNSQLSDVEGGHL
        SGGRFLNTKK NNVISNT  EE  NSGANH TK VSEAGS YMA DENG+KDT +++    + FM QN+ IT AFF+GK NGHG+STY SQL+DVEGGHL
Subjt:  SGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNMHITHAFFDGKSNGHGLSTYNSQLSDVEGGHL

Query:  GQPHESMQVNGAPQRAIPI
         QPHESMQVNGAPQRAIPI
Subjt:  GQPHESMQVNGAPQRAIPI

SwissProt top hitse value%identityAlignment
Q84JP1 Nuclear transcription factor Y subunit A-74.4e-2649.66Show/hide
Query:  HSIVLTSYPFSDAQYGQMLTSYGPQ---SMLPHFYGLHHGRMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRAR
        +S+    YP+ D  Y + + +  PQ    +     G+    +PLP D  EEPV+VNAKQYHGILRRRQSRA+ E + KVIKSRKPYLHESRHLHA+RR R
Subjt:  HSIVLTSYPFSDAQYGQMLTSYGPQ---SMLPHFYGLHHGRMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRAR

Query:  GSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMA
        G GGRFLN KK          E++ +  ++H  KS   AG + MA
Subjt:  GSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMA

Q8VY64 Nuclear transcription factor Y subunit A-42.0e-2643.62Show/hide
Query:  SQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNS-HMELVGHSIVLTSYPFSDAQYGQMLTSYGPQSMLPHFY--------GLHHGRMPLPLDMEEEPVY
        S  N+ + +KE    +  P   S    E +D NS + E + H +    YP+ D  Y  +   +  Q+ LPH Y        G+    +PL  D  EEPV+
Subjt:  SQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNS-HMELVGHSIVLTSYPFSDAQYGQMLTSYGPQSMLPHFY--------GLHHGRMPLPLDMEEEPVY

Query:  VNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSN
        VNAKQYHGILRRRQSRAK E   + IK++KPY+HESRHLHA+RR RG GGRFLN KK N    +   EE+  S  N      SEA S+
Subjt:  VNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSN

Q93ZH2 Nuclear transcription factor Y subunit A-31.3e-2557.01Show/hide
Query:  SYPFSDAQYGQML-TSYGPQSML--PHFYGLHHGRMPLPLDM-EEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGR
        S+ ++D  YG +L  +Y PQ+    P    +  GR+PLP ++ E +PV+VNAKQYH I+RRRQ RAK E + K+I++RKPYLHESRH+HA++R RGSGGR
Subjt:  SYPFSDAQYGQML-TSYGPQSML--PHFYGLHHGRMPLPLDM-EEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGR

Query:  FLNTKKL
        FLNTKKL
Subjt:  FLNTKKL

Q945M9 Nuclear transcription factor Y subunit A-91.7e-3338.35Show/hide
Query:  MPSKPENVDQQVTDGVKYVLQSTKYS-EPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQAN-DENIEKEVQHLKYIPFSTSP-PVGEHLDLNS-
        M SK ++   +V   V   + S+  S  PW        A         S+  + + + S  ++S +N D  + KE Q       +TSP   G++ D N  
Subjt:  MPSKPENVDQQVTDGVKYVLQSTKYS-EPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQAN-DENIEKEVQHLKYIPFSTSP-PVGEHLDLNS-

Query:  -----------HMELVGHSI-VLTSYPFSDAQYGQMLTSYG--PQSMLPHFYGLHHGRMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSR
                   H +LVGH++   +S P+ D  Y  ++ +YG  P   +P + G+ H RMPLP +M +EPV+VNAKQY  ILRRRQ+RAKAELEKK+IKSR
Subjt:  -----------HMELVGHSI-VLTSYPFSDAQYGQMLTSYG--PQSMLPHFYGLHHGRMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSR

Query:  KPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGS
        KPYLHESRH HAMRR RG+GGRF   KK N   S    EE  N    H T+S S + S+         +    D+ + S
Subjt:  KPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGS

Q9LXV5 Nuclear transcription factor Y subunit A-11.8e-3239.26Show/hide
Query:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWW----HGVGNNTAVGEDPIRTSSADYLNVTVSSGA-TQSQANDENIEKEVQHLKYIPFSTSPPVGEH----
        M SKP   +++  +    V Q   Y+EPWW     GV         P  +SS D  N + S+   + S+    N E +         ++S  V  H    
Subjt:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWW----HGVGNNTAVGEDPIRTSSADYLNVTVSSGA-TQSQANDENIEKEVQHLKYIPFSTSPPVGEH----

Query:  ----LDL-NSH-------MELVGHSIVLTSYPFSDAQYGQMLTSYGPQSM-LPHFYGLHHGRMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKAELEKKV
            L + N H        ELVGH I     P+ D  YG ++ +YG Q +    + G+   R  LPLDM +EPVYVNAKQY GILRRR++RAKAELE+KV
Subjt:  ----LDL-NSH-------MELVGHSIVLTSYPFSDAQYGQMLTSYGPQSM-LPHFYGLHHGRMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKAELEKKV

Query:  IKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDEN
        I+ RKPYLHESRH HAMRRAR SGGRF   KK     S     ED          + + +GS  + TD N
Subjt:  IKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDEN

Arabidopsis top hitse value%identityAlignment
AT3G20910.1 nuclear factor Y, subunit A91.2e-3438.35Show/hide
Query:  MPSKPENVDQQVTDGVKYVLQSTKYS-EPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQAN-DENIEKEVQHLKYIPFSTSP-PVGEHLDLNS-
        M SK ++   +V   V   + S+  S  PW        A         S+  + + + S  ++S +N D  + KE Q       +TSP   G++ D N  
Subjt:  MPSKPENVDQQVTDGVKYVLQSTKYS-EPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQAN-DENIEKEVQHLKYIPFSTSP-PVGEHLDLNS-

Query:  -----------HMELVGHSI-VLTSYPFSDAQYGQMLTSYG--PQSMLPHFYGLHHGRMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSR
                   H +LVGH++   +S P+ D  Y  ++ +YG  P   +P + G+ H RMPLP +M +EPV+VNAKQY  ILRRRQ+RAKAELEKK+IKSR
Subjt:  -----------HMELVGHSI-VLTSYPFSDAQYGQMLTSYG--PQSMLPHFYGLHHGRMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSR

Query:  KPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGS
        KPYLHESRH HAMRR RG+GGRF   KK N   S    EE  N    H T+S S + S+         +    D+ + S
Subjt:  KPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGS

AT5G12840.1 nuclear factor Y, subunit A11.3e-3339.26Show/hide
Query:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWW----HGVGNNTAVGEDPIRTSSADYLNVTVSSGA-TQSQANDENIEKEVQHLKYIPFSTSPPVGEH----
        M SKP   +++  +    V Q   Y+EPWW     GV         P  +SS D  N + S+   + S+    N E +         ++S  V  H    
Subjt:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWW----HGVGNNTAVGEDPIRTSSADYLNVTVSSGA-TQSQANDENIEKEVQHLKYIPFSTSPPVGEH----

Query:  ----LDL-NSH-------MELVGHSIVLTSYPFSDAQYGQMLTSYGPQSM-LPHFYGLHHGRMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKAELEKKV
            L + N H        ELVGH I     P+ D  YG ++ +YG Q +    + G+   R  LPLDM +EPVYVNAKQY GILRRR++RAKAELE+KV
Subjt:  ----LDL-NSH-------MELVGHSIVLTSYPFSDAQYGQMLTSYGPQSM-LPHFYGLHHGRMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKAELEKKV

Query:  IKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDEN
        I+ RKPYLHESRH HAMRRAR SGGRF   KK     S     ED          + + +GS  + TD N
Subjt:  IKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDEN

AT5G12840.2 nuclear factor Y, subunit A13.4e-3436.96Show/hide
Query:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWW-------------HGVGNNTAVGEDPIRTSSADYLNVTV--------------SSGATQSQANDENIEKE
        M SKP   +++  +    V Q   Y+EPWW              G+ +N++  + P  + S D  + +               S  AT S++++  +E  
Subjt:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWW-------------HGVGNNTAVGEDPIRTSSADYLNVTV--------------SSGATQSQANDENIEKE

Query:  VQHLKYIPFSTSPPVGEHLDLNSHMELVGHSIVLTSYPFSDAQYGQMLTSYGPQSM-LPHFYGLHHGRMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKA
           L        P       L    ELVGH I     P+ D  YG ++ +YG Q +    + G+   R  LPLDM +EPVYVNAKQY GILRRR++RAKA
Subjt:  VQHLKYIPFSTSPPVGEHLDLNSHMELVGHSIVLTSYPFSDAQYGQMLTSYGPQSM-LPHFYGLHHGRMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKA

Query:  ELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDEN
        ELE+KVI+ RKPYLHESRH HAMRRAR SGGRF   KK     S     ED          + + +GS  + TD N
Subjt:  ELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDEN

AT5G12840.3 nuclear factor Y, subunit A11.3e-3339.26Show/hide
Query:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWW----HGVGNNTAVGEDPIRTSSADYLNVTVSSGA-TQSQANDENIEKEVQHLKYIPFSTSPPVGEH----
        M SKP   +++  +    V Q   Y+EPWW     GV         P  +SS D  N + S+   + S+    N E +         ++S  V  H    
Subjt:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWW----HGVGNNTAVGEDPIRTSSADYLNVTVSSGA-TQSQANDENIEKEVQHLKYIPFSTSPPVGEH----

Query:  ----LDL-NSH-------MELVGHSIVLTSYPFSDAQYGQMLTSYGPQSM-LPHFYGLHHGRMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKAELEKKV
            L + N H        ELVGH I     P+ D  YG ++ +YG Q +    + G+   R  LPLDM +EPVYVNAKQY GILRRR++RAKAELE+KV
Subjt:  ----LDL-NSH-------MELVGHSIVLTSYPFSDAQYGQMLTSYGPQSM-LPHFYGLHHGRMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKAELEKKV

Query:  IKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDEN
        I+ RKPYLHESRH HAMRRAR SGGRF   KK     S     ED          + + +GS  + TD N
Subjt:  IKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDEN

AT5G12840.4 nuclear factor Y, subunit A13.4e-3436.96Show/hide
Query:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWW-------------HGVGNNTAVGEDPIRTSSADYLNVTV--------------SSGATQSQANDENIEKE
        M SKP   +++  +    V Q   Y+EPWW              G+ +N++  + P  + S D  + +               S  AT S++++  +E  
Subjt:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWW-------------HGVGNNTAVGEDPIRTSSADYLNVTV--------------SSGATQSQANDENIEKE

Query:  VQHLKYIPFSTSPPVGEHLDLNSHMELVGHSIVLTSYPFSDAQYGQMLTSYGPQSM-LPHFYGLHHGRMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKA
           L        P       L    ELVGH I     P+ D  YG ++ +YG Q +    + G+   R  LPLDM +EPVYVNAKQY GILRRR++RAKA
Subjt:  VQHLKYIPFSTSPPVGEHLDLNSHMELVGHSIVLTSYPFSDAQYGQMLTSYGPQSM-LPHFYGLHHGRMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKA

Query:  ELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDEN
        ELE+KVI+ RKPYLHESRH HAMRRAR SGGRF   KK     S     ED          + + +GS  + TD N
Subjt:  ELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDEN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCATCGAAACCAGAAAATGTAGACCAACAAGTAACTGATGGGGTGAAGTATGTGCTGCAATCGACCAAATACTCTGAGCCTTGGTGGCATGGAGTTGGGAACAACAC
CGCCGTTGGTGAAGATCCTATCAGAACATCTTCTGCAGACTACCTGAACGTTACTGTTTCCAGTGGAGCAACTCAGTCACAAGCAAATGATGAAAATATTGAGAAAGAAG
TCCAGCATCTCAAGTACATTCCATTTTCTACATCCCCACCGGTGGGTGAACATCTTGATCTAAATTCCCACATGGAACTTGTTGGTCACTCAATTGTTTTGACATCATAT
CCTTTTTCAGATGCACAATATGGTCAAATGCTAACTTCTTATGGACCACAATCAATGTTACCTCATTTTTATGGGCTTCACCATGGTAGGATGCCTTTACCCCTTGACAT
GGAAGAAGAGCCCGTTTATGTAAATGCAAAGCAGTATCATGGCATCTTGAGGAGAAGACAGTCACGTGCCAAAGCTGAGCTTGAGAAGAAAGTGATAAAAAGTAGAAAGC
CATACCTTCATGAATCCAGACACCTCCACGCTATGAGACGAGCAAGAGGCAGCGGAGGGCGTTTCCTCAATACCAAAAAGCTCAACAATGTTATTTCCAATACATCAACA
GAGGAAGACTTCAATTCTGGTGCAAACCATTTCACAAAATCTGTAAGTGAGGCTGGATCAAATTACATGGCGACTGATGAAAATGGAGTTAAGGATACGCATGATGATCA
GCAGGAGGGCAGCAGAGGGTTCATGAATCAAAATATGCATATAACACACGCTTTCTTTGATGGAAAATCAAATGGCCATGGTTTATCCACTTACAATTCCCAACTCTCCG
ATGTTGAGGGAGGGCATCTCGGTCAACCGCACGAAAGCATGCAGGTGAACGGGGCTCCACAGAGGGCCATCCCCATCAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCATCGAAACCAGAAAATGTAGACCAACAAGTAACTGATGGGGTGAAGTATGTGCTGCAATCGACCAAATACTCTGAGCCTTGGTGGCATGGAGTTGGGAACAACAC
CGCCGTTGGTGAAGATCCTATCAGAACATCTTCTGCAGACTACCTGAACGTTACTGTTTCCAGTGGAGCAACTCAGTCACAAGCAAATGATGAAAATATTGAGAAAGAAG
TCCAGCATCTCAAGTACATTCCATTTTCTACATCCCCACCGGTGGGTGAACATCTTGATCTAAATTCCCACATGGAACTTGTTGGTCACTCAATTGTTTTGACATCATAT
CCTTTTTCAGATGCACAATATGGTCAAATGCTAACTTCTTATGGACCACAATCAATGTTACCTCATTTTTATGGGCTTCACCATGGTAGGATGCCTTTACCCCTTGACAT
GGAAGAAGAGCCCGTTTATGTAAATGCAAAGCAGTATCATGGCATCTTGAGGAGAAGACAGTCACGTGCCAAAGCTGAGCTTGAGAAGAAAGTGATAAAAAGTAGAAAGC
CATACCTTCATGAATCCAGACACCTCCACGCTATGAGACGAGCAAGAGGCAGCGGAGGGCGTTTCCTCAATACCAAAAAGCTCAACAATGTTATTTCCAATACATCAACA
GAGGAAGACTTCAATTCTGGTGCAAACCATTTCACAAAATCTGTAAGTGAGGCTGGATCAAATTACATGGCGACTGATGAAAATGGAGTTAAGGATACGCATGATGATCA
GCAGGAGGGCAGCAGAGGGTTCATGAATCAAAATATGCATATAACACACGCTTTCTTTGATGGAAAATCAAATGGCCATGGTTTATCCACTTACAATTCCCAACTCTCCG
ATGTTGAGGGAGGGCATCTCGGTCAACCGCACGAAAGCATGCAGGTGAACGGGGCTCCACAGAGGGCCATCCCCATCAAGTGA
Protein sequenceShow/hide protein sequence
MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMELVGHSIVLTSY
PFSDAQYGQMLTSYGPQSMLPHFYGLHHGRMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTST
EEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNMHITHAFFDGKSNGHGLSTYNSQLSDVEGGHLGQPHESMQVNGAPQRAIPIK