CuGenDBv2

Gene ID	Moc09g06050
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	transcription factor MYB78
Genome location	chr9:4691513..4692103
RNA-Seq Expression	Moc09g06050
Synteny	Moc09g06050
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0006950 - response to stress (biological process) GO:0009628 - response to abiotic stimulus (biological process) GO:1901700 - response to oxygen-containing compound (biological process) GO:0005634 - nucleus (cellular component) GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function) GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0058537.1 transcription factor MYB108-like protein [Cucumis melo var. makuwa]

6.0e-38

66.19

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Query:  MRYVWIPRLLERIQASTDTVAVAAATDPGQPPHPLLDRTHPSPSDSAWVNSHLAPATSSSDSGSDQVQPQVSPVSDVTENFNLVGIGEDHDGTVMLMEHS
        MRYVW+PRLLERIQASTD  + A   D  QP HP L+ T  SPS S+WVN H+AP TSSSDS SDQVQ QVSP+SDV ENFN+V   E+ D  VMLMEH 
Subjt:  MRYVWIPRLLERIQASTDTVAVAAATDPGQPPHPLLDRTHPSPSDSAWVNSHLAPATSSSDSGSDQVQPQVSPVSDVTENFNLVGIGEDHDGTVMLMEHS

Query:  CD-GVAVNGWIGGGESLDDGFWDEEDLW-FLQQQFGDDV
        CD G A+N WIGG E L++G W+EED+W  LQQQFGDDV
Subjt:  CD-GVAVNGWIGGGESLDDGFWDEEDLW-FLQQQFGDDV

TYJ96893.1 transcription factor MYB108-like protein [Cucumis melo var. makuwa]

6.0e-38

66.19

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Query:  MRYVWIPRLLERIQASTDTVAVAAATDPGQPPHPLLDRTHPSPSDSAWVNSHLAPATSSSDSGSDQVQPQVSPVSDVTENFNLVGIGEDHDGTVMLMEHS
        MRYVW+PRLLERIQASTD  + A   D  QP HP L+ T  SPS S+WVN H+AP TSSSDS SDQVQ QVSP+SDV ENFN+V   E+ D  VMLMEH 
Subjt:  MRYVWIPRLLERIQASTDTVAVAAATDPGQPPHPLLDRTHPSPSDSAWVNSHLAPATSSSDSGSDQVQPQVSPVSDVTENFNLVGIGEDHDGTVMLMEHS

Query:  CD-GVAVNGWIGGGESLDDGFWDEEDLW-FLQQQFGDDV
        CD G A+N WIGG E L++G W+EED+W  LQQQFGDDV
Subjt:  CD-GVAVNGWIGGGESLDDGFWDEEDLW-FLQQQFGDDV

XP_004136147.2 transcription factor MYB78 [Cucumis sativus]

2.9e-40

67.63

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Query:  MRYVWIPRLLERIQASTDTVAVAAATDPGQPPHPLLDRTHPSPSDSAWVNSHLAPATSSSDSGSDQVQPQVSPVSDVTENFNLVGIGEDHDGTVMLMEHS
        MRYVW+PRLLERIQASTD  +     D  QPPHP L+ T  SPS S+WVN H+AP TSSSDS SDQVQ QVSPVSD+TENFN+V   E+ DG +MLMEH 
Subjt:  MRYVWIPRLLERIQASTDTVAVAAATDPGQPPHPLLDRTHPSPSDSAWVNSHLAPATSSSDSGSDQVQPQVSPVSDVTENFNLVGIGEDHDGTVMLMEHS

Query:  CDGVA-VNGWIGGGESLDDGFWDEEDLW-FLQQQFGDDV
        CDG A +N WIGGGE L++G W+EED+W  LQQQFGDDV
Subjt:  CDGVA-VNGWIGGGESLDDGFWDEEDLW-FLQQQFGDDV

XP_022151294.1 transcription factor MYB78 [Momordica charantia]

9.7e-73

100

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Query:  MRYVWIPRLLERIQASTDTVAVAAATDPGQPPHPLLDRTHPSPSDSAWVNSHLAPATSSSDSGSDQVQPQVSPVSDVTENFNLVGIGEDHDGTVMLMEHS
        MRYVWIPRLLERIQASTDTVAVAAATDPGQPPHPLLDRTHPSPSDSAWVNSHLAPATSSSDSGSDQVQPQVSPVSDVTENFNLVGIGEDHDGTVMLMEHS
Subjt:  MRYVWIPRLLERIQASTDTVAVAAATDPGQPPHPLLDRTHPSPSDSAWVNSHLAPATSSSDSGSDQVQPQVSPVSDVTENFNLVGIGEDHDGTVMLMEHS

Query:  CDGVAVNGWIGGGESLDDGFWDEEDLWFLQQQFGDDV
        CDGVAVNGWIGGGESLDDGFWDEEDLWFLQQQFGDDV
Subjt:  CDGVAVNGWIGGGESLDDGFWDEEDLWFLQQQFGDDV

XP_038899114.1 transcription factor MYB78-like [Benincasa hispida]

1.1e-42

69.57

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Query:  MRYVWIPRLLERIQASTDTVAVAAATDPGQPPHPLLDRTHPSPSDSAWVNSHLAPATSSSDSGSDQVQPQVSPVSDVTENFNLVGIGEDHDGTVMLMEHS
        MRYVW+PRLLERIQASTD  + +   D  QPPHP L+ T  SPS S+W+N H+AP TSSSDS SDQVQ QVS VSDV ENFN VG  E+ DG VMLMEH 
Subjt:  MRYVWIPRLLERIQASTDTVAVAAATDPGQPPHPLLDRTHPSPSDSAWVNSHLAPATSSSDSGSDQVQPQVSPVSDVTENFNLVGIGEDHDGTVMLMEHS

Query:  CDGVAVNGWIGGGESLDDGFWDEEDLW-FLQQQFGDDV
        CDG A+NGWIGGGE L++GFW+EED+W FLQQQ GDDV
Subjt:  CDGVAVNGWIGGGESLDDGFWDEEDLW-FLQQQFGDDV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K5V3 Uncharacterized protein

1.4e-40

67.63

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Query:  MRYVWIPRLLERIQASTDTVAVAAATDPGQPPHPLLDRTHPSPSDSAWVNSHLAPATSSSDSGSDQVQPQVSPVSDVTENFNLVGIGEDHDGTVMLMEHS
        MRYVW+PRLLERIQASTD  +     D  QPPHP L+ T  SPS S+WVN H+AP TSSSDS SDQVQ QVSPVSD+TENFN+V   E+ DG +MLMEH 
Subjt:  MRYVWIPRLLERIQASTDTVAVAAATDPGQPPHPLLDRTHPSPSDSAWVNSHLAPATSSSDSGSDQVQPQVSPVSDVTENFNLVGIGEDHDGTVMLMEHS

Query:  CDGVA-VNGWIGGGESLDDGFWDEEDLW-FLQQQFGDDV
        CDG A +N WIGGGE L++G W+EED+W  LQQQFGDDV
Subjt:  CDGVA-VNGWIGGGESLDDGFWDEEDLW-FLQQQFGDDV

A0A1S3CEB9 transcription factor MYB108-like

9.3e-37

65.47

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Query:  MRYVWIPRLLERIQASTDTVAVAAATDPGQPPHPLLDRTHPSPSDSAWVNSHLAPATSSSDSGSDQVQPQVSPVSDVTENFNLVGIGEDHDGTVMLMEHS
        MRYVW+PRLLERIQASTD  + A   D  QP HP L+ T  SPS S+WVN H+AP TSSSDS  DQVQ QVSPVSDV ENFN+V   E+ D  VMLMEH 
Subjt:  MRYVWIPRLLERIQASTDTVAVAAATDPGQPPHPLLDRTHPSPSDSAWVNSHLAPATSSSDSGSDQVQPQVSPVSDVTENFNLVGIGEDHDGTVMLMEHS

Query:  CD-GVAVNGWIGGGESLDDGFWDEEDLW-FLQQQFGDDV
        CD   A+N WIGG E L++G W+EED+W  LQQQFGDDV
Subjt:  CD-GVAVNGWIGGGESLDDGFWDEEDLW-FLQQQFGDDV

A0A5A7UUY5 Transcription factor MYB108-like protein

2.9e-38

66.19

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Query:  MRYVWIPRLLERIQASTDTVAVAAATDPGQPPHPLLDRTHPSPSDSAWVNSHLAPATSSSDSGSDQVQPQVSPVSDVTENFNLVGIGEDHDGTVMLMEHS
        MRYVW+PRLLERIQASTD  + A   D  QP HP L+ T  SPS S+WVN H+AP TSSSDS SDQVQ QVSP+SDV ENFN+V   E+ D  VMLMEH 
Subjt:  MRYVWIPRLLERIQASTDTVAVAAATDPGQPPHPLLDRTHPSPSDSAWVNSHLAPATSSSDSGSDQVQPQVSPVSDVTENFNLVGIGEDHDGTVMLMEHS

Query:  CD-GVAVNGWIGGGESLDDGFWDEEDLW-FLQQQFGDDV
        CD G A+N WIGG E L++G W+EED+W  LQQQFGDDV
Subjt:  CD-GVAVNGWIGGGESLDDGFWDEEDLW-FLQQQFGDDV

A0A5D3BC50 Transcription factor MYB108-like protein

2.9e-38

66.19

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Query:  MRYVWIPRLLERIQASTDTVAVAAATDPGQPPHPLLDRTHPSPSDSAWVNSHLAPATSSSDSGSDQVQPQVSPVSDVTENFNLVGIGEDHDGTVMLMEHS
        MRYVW+PRLLERIQASTD  + A   D  QP HP L+ T  SPS S+WVN H+AP TSSSDS SDQVQ QVSP+SDV ENFN+V   E+ D  VMLMEH 
Subjt:  MRYVWIPRLLERIQASTDTVAVAAATDPGQPPHPLLDRTHPSPSDSAWVNSHLAPATSSSDSGSDQVQPQVSPVSDVTENFNLVGIGEDHDGTVMLMEHS

Query:  CD-GVAVNGWIGGGESLDDGFWDEEDLW-FLQQQFGDDV
        CD G A+N WIGG E L++G W+EED+W  LQQQFGDDV
Subjt:  CD-GVAVNGWIGGGESLDDGFWDEEDLW-FLQQQFGDDV

A0A6J1DCK9 transcription factor MYB78

4.7e-73

100

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Query:  MRYVWIPRLLERIQASTDTVAVAAATDPGQPPHPLLDRTHPSPSDSAWVNSHLAPATSSSDSGSDQVQPQVSPVSDVTENFNLVGIGEDHDGTVMLMEHS
        MRYVWIPRLLERIQASTDTVAVAAATDPGQPPHPLLDRTHPSPSDSAWVNSHLAPATSSSDSGSDQVQPQVSPVSDVTENFNLVGIGEDHDGTVMLMEHS
Subjt:  MRYVWIPRLLERIQASTDTVAVAAATDPGQPPHPLLDRTHPSPSDSAWVNSHLAPATSSSDSGSDQVQPQVSPVSDVTENFNLVGIGEDHDGTVMLMEHS

Query:  CDGVAVNGWIGGGESLDDGFWDEEDLWFLQQQFGDDV
        CDGVAVNGWIGGGESLDDGFWDEEDLWFLQQQFGDDV
Subjt:  CDGVAVNGWIGGGESLDDGFWDEEDLWFLQQQFGDDV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G47190.1 myb domain protein 2

4.2e-05

34.9

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Query:  MRYVWIPRLLERIQA----STDTVAVAAATDPGQPPHPLLDRTHPSPSDSAWV----NSH--LAPATSSSDSGSDQVQPQVSPVSDVTENFNLVGIGEDH
        MR VW+PRL+ERI A    +T     +  TDP QP +       PSP +  +V    N H    PAT  S + S+      S V     N    G G D 
Subjt:  MRYVWIPRLLERIQA----STDTVAVAAATDPGQPPHPLLDRTHPSPSDSAWV----NSH--LAPATSSSDSGSDQVQPQVSPVSDVTENFNLVGIGEDH

Query:  DGTVMLMEHSCDGVAVNGW--IGGGESLDDGFW-DEEDLWFLQQQFGDD
         G     E        N W  +GG     D  W DEE  WFLQ QF  D
Subjt:  DGTVMLMEHSCDGVAVNGW--IGGGESLDDGFW-DEEDLWFLQQQFGDD

Sequences

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CDS sequence

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ATGCGATACGTGTGGATCCCCCGTTTGCTCGAACGAATCCAAGCCTCAACCGACACCGTCGCCGTCGCTGCCGCTACCGATCCCGGTCAACCACCGCACCCTCTCCTCGA
CAGGACCCACCCGTCGCCCTCCGACTCCGCTTGGGTCAATTCTCATTTGGCTCCCGCAACTTCATCATCCGACTCCGGATCGGATCAGGTCCAACCACAAGTCTCGCCAG
TTTCAGACGTGACGGAGAACTTCAATCTCGTCGGTATTGGCGAGGATCACGACGGGACGGTAATGCTAATGGAACATAGCTGTGACGGGGTGGCGGTGAATGGGTGGATA
GGTGGCGGAGAGTCATTGGACGACGGATTTTGGGATGAAGAAGACTTGTGGTTCTTGCAGCAACAATTTGGTGATGATGTTTGA

mRNA sequence

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Protein sequence

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MRYVWIPRLLERIQASTDTVAVAAATDPGQPPHPLLDRTHPSPSDSAWVNSHLAPATSSSDSGSDQVQPQVSPVSDVTENFNLVGIGEDHDGTVMLMEHSCDGVAVNGWI
GGGESLDDGFWDEEDLWFLQQQFGDDV

Moc09g06050 (gene) of Bitter gourd (OHB3-1) v2 genome