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Moc09g06170 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g06170
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionTranscription factor UPBEAT1
Genome locationchr9:4801701..4802051
RNA-Seq ExpressionMoc09g06170
SyntenyMoc09g06170
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046707.1 transcription factor UPBEAT1 [Cucumis melo var. makuwa]8.7e-0641.73Show/hide
Query:  QQTLMEEAEDQQEEAIN-KAKAKAT-----IRRRSRRRRRSRS-----------------SGIEKRVSTLRSLVPNMNNNNSINCHQTSTVGLQHLFTTT
        ++++ EE  +++++ IN K K K+T      RR +RRR RS S                 S IE+RV+ LR+LVPN N+N+  +    +   L+ LFT T
Subjt:  QQTLMEEAEDQQEEAIN-KAKAKAT-----IRRRSRRRRRSRS-----------------SGIEKRVSTLRSLVPNMNNNNSINCHQTSTVGLQHLFTTT

Query:  ADYILLLQTRVRLMQTLLHVLSASPSN
        ADYIL LQTRVRLM+TL+ VLS   S+
Subjt:  ADYILLLQTRVRLMQTLLHVLSASPSN

KAG6575752.1 Transcription factor UPBEAT1, partial [Cucurbita argyrosperma subsp. sororia]1.3e-0943.41Show/hide
Query:  MGVFPETLFLVQQTLMEEAED-------------QQEEAINKA--KAKATIRRRSRRRRRSRSSGIEKRVSTLRSLVPNMNNNNSINCHQTSTVGLQHLF
        MG FP TL L+Q  + E  +D             ++E+  NK+  + + T +  +++ RRS S+ I +RV+TLR+LVPNMNN+N    +  +   L+ LF
Subjt:  MGVFPETLFLVQQTLMEEAED-------------QQEEAINKA--KAKATIRRRSRRRRRSRSSGIEKRVSTLRSLVPNMNNNNSINCHQTSTVGLQHLF

Query:  TTTADYILLLQTRVRLMQTLLHVLSASPS
        T TADYIL LQTRVR M+TL+ VLS S S
Subjt:  TTTADYILLLQTRVRLMQTLLHVLSASPS

KAG6593250.1 Transcription factor UPBEAT1, partial [Cucurbita argyrosperma subsp. sororia]5.4e-1651.91Show/hide
Query:  MGVFPETLFLVQ---------QTLMEEAEDQQEEAINKAKAKATIRRRSR------RRRRSRSS-GIEKRVSTLRSLVPNMNNNNSINCHQTSTVGLQHL
        MGV+PETL LVQ         +T MEE ++QQE+   +     +  RR R      ++RRSRSS  IE+RVSTLR+LVPNMNNNN  N H++    L+ L
Subjt:  MGVFPETLFLVQ---------QTLMEEAEDQQEEAINKAKAKATIRRRSR------RRRRSRSS-GIEKRVSTLRSLVPNMNNNNSINCHQTSTVGLQHL

Query:  FTTTADYILLLQTRVRLMQTLLHVLSASPSN
        FT TADYIL LQTRVR M+ L+ VLSAS ++
Subjt:  FTTTADYILLLQTRVRLMQTLLHVLSASPSN

KAG7025601.1 Transcription factor UPBEAT1, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-1655.04Show/hide
Query:  MGVFPETLFLVQ---------QTLMEEAEDQQEEAINKAKAKATIRRRS----RRRRRSRSS-GIEKRVSTLRSLVPNMNNNNSINCHQTSTVGLQHLFT
        MGV+PETL LVQ         +T MEE + +Q+EAI K+  +   RRRS     ++RRSRSS  IE+RVSTLR+LVPNMNNNN  N H++    L+ LFT
Subjt:  MGVFPETLFLVQ---------QTLMEEAEDQQEEAINKAKAKATIRRRS----RRRRRSRSS-GIEKRVSTLRSLVPNMNNNNSINCHQTSTVGLQHLFT

Query:  TTADYILLLQTRVRLMQTLLHVLSASPSN
         TADYIL LQTRVR M+ L+ VLSAS ++
Subjt:  TTADYILLLQTRVRLMQTLLHVLSASPSN

XP_031744332.1 transcription factor UPBEAT1 [Cucumis sativus]4.9e-0956.25Show/hide
Query:  IRRRSRRRRRSRSSGIEKRVSTLRSLVPNMNNNNSINCHQTSTVGLQHLFTTTADYILLLQTRVRLMQTLLHVLSASPSN
        +++RSRR   S SS IE+RV+TLRSLVPN +N+N  +  ++    L+ LFT TADYIL LQTRVRLM+TL+ VLS   S+
Subjt:  IRRRSRRRRRSRSSGIEKRVSTLRSLVPNMNNNNSINCHQTSTVGLQHLFTTTADYILLLQTRVRLMQTLLHVLSASPSN

TrEMBL top hitse value%identityAlignment
A0A0A0K6D9 Uncharacterized protein2.4e-0956.25Show/hide
Query:  IRRRSRRRRRSRSSGIEKRVSTLRSLVPNMNNNNSINCHQTSTVGLQHLFTTTADYILLLQTRVRLMQTLLHVLSASPSN
        +++RSRR   S SS IE+RV+TLRSLVPN +N+N  +  ++    L+ LFT TADYIL LQTRVRLM+TL+ VLS   S+
Subjt:  IRRRSRRRRRSRSSGIEKRVSTLRSLVPNMNNNNSINCHQTSTVGLQHLFTTTADYILLLQTRVRLMQTLLHVLSASPSN

A0A1S2XY93 transcription factor UPBEAT1-like8.8e-0441.84Show/hide
Query:  EAEDQQEEAINKAKAKATIRRRSRRRR---RSRSSGIEKRVSTLRSLVPNMNNNNSINCHQTSTVGLQHLFTTTADYILLLQTRVRLMQTLLHVLSAS
        EA+ ++ E   K       RR S +RR   R  S GI++RV TL+SL+PN ++          ++GL  LF  TA+YIL LQTRVR+MQ ++ VL+ S
Subjt:  EAEDQQEEAINKAKAKATIRRRSRRRR---RSRSSGIEKRVSTLRSLVPNMNNNNSINCHQTSTVGLQHLFTTTADYILLLQTRVRLMQTLLHVLSAS

A0A444XT61 Uncharacterized protein5.1e-0444.3Show/hide
Query:  RRSRRRRRSRSSGIEKRVSTLRSLVPNMNNNNSINCHQTSTVGLQHLFTTTADYILLLQTRVRLMQTLLHVLSASPSNE
        RRSR R    ++GI+ RV TL++L+PN +NN          +GL  LF  TA+YIL LQ RVR+MQ ++ VL+ S  ++
Subjt:  RRSRRRRRSRSSGIEKRVSTLRSLVPNMNNNNSINCHQTSTVGLQHLFTTTADYILLLQTRVRLMQTLLHVLSASPSNE

A0A445BD20 Uncharacterized protein5.1e-0444.3Show/hide
Query:  RRSRRRRRSRSSGIEKRVSTLRSLVPNMNNNNSINCHQTSTVGLQHLFTTTADYILLLQTRVRLMQTLLHVLSASPSNE
        RRSR R    ++GI+ RV TL++L+PN +NN          +GL  LF  TA+YIL LQ RVR+MQ ++ VL+ S  ++
Subjt:  RRSRRRRRSRSSGIEKRVSTLRSLVPNMNNNNSINCHQTSTVGLQHLFTTTADYILLLQTRVRLMQTLLHVLSASPSNE

A0A5A7TXU1 Transcription factor UPBEAT14.2e-0641.73Show/hide
Query:  QQTLMEEAEDQQEEAIN-KAKAKAT-----IRRRSRRRRRSRS-----------------SGIEKRVSTLRSLVPNMNNNNSINCHQTSTVGLQHLFTTT
        ++++ EE  +++++ IN K K K+T      RR +RRR RS S                 S IE+RV+ LR+LVPN N+N+  +    +   L+ LFT T
Subjt:  QQTLMEEAEDQQEEAIN-KAKAKAT-----IRRRSRRRRRSRS-----------------SGIEKRVSTLRSLVPNMNNNNSINCHQTSTVGLQHLFTTT

Query:  ADYILLLQTRVRLMQTLLHVLSASPSN
        ADYIL LQTRVRLM+TL+ VLS   S+
Subjt:  ADYILLLQTRVRLMQTLLHVLSASPSN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGTTTTCCCAGAGACCCTTTTTCTGGTTCAACAAACATTAATGGAAGAAGCAGAAGATCAACAAGAAGAAGCCATTAACAAAGCCAAAGCCAAAGCCACCATTAG
AAGAAGATCAAGAAGAAGAAGAAGATCAAGATCCTCAGGAATTGAGAAACGGGTCAGCACATTGAGAAGCCTCGTACCAAACATGAACAACAACAACAGCATTAATTGTC
ATCAAACCTCCACTGTCGGATTACAACACCTCTTCACTACCACAGCCGATTACATATTGTTGCTGCAAACAAGAGTCAGATTGATGCAGACTTTGCTTCATGTCTTGTCT
GCTTCTCCTTCTAATGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGTTTTCCCAGAGACCCTTTTTCTGGTTCAACAAACATTAATGGAAGAAGCAGAAGATCAACAAGAAGAAGCCATTAACAAAGCCAAAGCCAAAGCCACCATTAG
AAGAAGATCAAGAAGAAGAAGAAGATCAAGATCCTCAGGAATTGAGAAACGGGTCAGCACATTGAGAAGCCTCGTACCAAACATGAACAACAACAACAGCATTAATTGTC
ATCAAACCTCCACTGTCGGATTACAACACCTCTTCACTACCACAGCCGATTACATATTGTTGCTGCAAACAAGAGTCAGATTGATGCAGACTTTGCTTCATGTCTTGTCT
GCTTCTCCTTCTAATGAGTGA
Protein sequenceShow/hide protein sequence
MGVFPETLFLVQQTLMEEAEDQQEEAINKAKAKATIRRRSRRRRRSRSSGIEKRVSTLRSLVPNMNNNNSINCHQTSTVGLQHLFTTTADYILLLQTRVRLMQTLLHVLS
ASPSNE