; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc09g06540 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g06540
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGATA transcription factor 16-like
Genome locationchr9:5102998..5106009
RNA-Seq ExpressionMoc09g06540
SyntenyMoc09g06540
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0008270 - zinc ion binding (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR000679 - Zinc finger, GATA-type
IPR013088 - Zinc finger, NHR/GATA-type
IPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046674.1 GATA transcription factor 15-like [Cucumis melo var. makuwa]9.2e-3359.21Show/hide
Query:  MASVIDR-PDPSASTFHPSLM-GISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKFKMSS----------GGVNKSRKGKKLGN
        MA +++R  D S STF+PSLM  +S Q   + E++KQR+CV C ATRTPLWR GPAGPRSLCNACGIR+RK KM+S             NK  KGKK+G 
Subjt:  MASVIDR-PDPSASTFHPSLM-GISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKFKMSS----------GGVNKSRKGKKLGN

Query:  GGSLKLTVVDFRREIVLHSAGAT-MADR-VADGIGEDEQAAAMLLMALSSGY
        GGSLKL VV   REI++H    T M D  VA+ IGE+EQ AAMLLMALSSGY
Subjt:  GGSLKLTVVDFRREIVLHSAGAT-MADR-VADGIGEDEQAAAMLLMALSSGY

XP_022152091.1 GATA transcription factor 16-like [Momordica charantia]7.2e-70100Show/hide
Query:  MASVIDRPDPSASTFHPSLMGISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKFKMSSGGVNKSRKGKKLGNGGSLKLTVVDFR
        MASVIDRPDPSASTFHPSLMGISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKFKMSSGGVNKSRKGKKLGNGGSLKLTVVDFR
Subjt:  MASVIDRPDPSASTFHPSLMGISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKFKMSSGGVNKSRKGKKLGNGGSLKLTVVDFR

Query:  REIVLHSAGATMADRVADGIGEDEQAAAMLLMALSSGY
        REIVLHSAGATMADRVADGIGEDEQAAAMLLMALSSGY
Subjt:  REIVLHSAGATMADRVADGIGEDEQAAAMLLMALSSGY

XP_022959984.1 GATA transcription factor 15-like [Cucurbita moschata]9.2e-3364.44Show/hide
Query:  DRPDPSASTFHP-SLMGISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKFKMSSGGVNKSRKGKKLGNGGSLKLTVVDFRREIV
        + PD S STF+P SLM ISNQ  L  E QKQR+C  C  TRTPLWR GPAGPRSLCNACGIR+RK K S+GGVNKS  GKK+       + VV   REI+
Subjt:  DRPDPSASTFHP-SLMGISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKFKMSSGGVNKSRKGKKLGNGGSLKLTVVDFRREIV

Query:  LHSAGATMADR-VADGIGEDEQAAAMLLMALSSGY
        LH A A MA+   A+ IGE+EQAAAMLLMALSSGY
Subjt:  LHSAGATMADR-VADGIGEDEQAAAMLLMALSSGY

XP_023004687.1 GATA transcription factor 15-like [Cucurbita maxima]2.0e-3262.96Show/hide
Query:  DRPDPSASTFHP-SLMGISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKFKMSSGGVNKSRKGKKLGNGGSLKLTVVDFRREIV
        + PD S STF+P SLM ISNQ  L +E QKQR+C  C  TRTPLWR GPAGPRSLCNACGIR+RK K ++GGVNKS  GKK+       + VV   REI+
Subjt:  DRPDPSASTFHP-SLMGISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKFKMSSGGVNKSRKGKKLGNGGSLKLTVVDFRREIV

Query:  LHSAGATMADR-VADGIGEDEQAAAMLLMALSSGY
        LH   A MA+   A+ IGE+EQAAAMLLMALSSGY
Subjt:  LHSAGATMADR-VADGIGEDEQAAAMLLMALSSGY

XP_023515141.1 GATA transcription factor 15-like [Cucurbita pepo subsp. pepo]4.1e-3364.44Show/hide
Query:  DRPDPSASTFHP-SLMGISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKFKMSSGGVNKSRKGKKLGNGGSLKLTVVDFRREIV
        + PD S STF+P SLM ISN   L  E QKQR+C  C  TRTPLWR GPAGPRSLCNACGIR+RK K S+GGVNKS  GKK+       + VVD  REI+
Subjt:  DRPDPSASTFHP-SLMGISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKFKMSSGGVNKSRKGKKLGNGGSLKLTVVDFRREIV

Query:  LHSAGATMADR-VADGIGEDEQAAAMLLMALSSGY
        LH A A MA+   A+ IGE+EQAAAMLLMALSSGY
Subjt:  LHSAGATMADR-VADGIGEDEQAAAMLLMALSSGY

TrEMBL top hitse value%identityAlignment
A0A1S3BSR7 GATA transcription factor 15-like1.3e-3257.69Show/hide
Query:  MASVIDR-PDPSASTFHPSLM-GISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKFKMSS--------------GGVNKSRKGK
        MA +++R  D S STF+PSLM  +S Q   + E++KQR+CV C ATRTPLWR GPAGPRSLCNACGIR+RK KM+S                 NK  KGK
Subjt:  MASVIDR-PDPSASTFHPSLM-GISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKFKMSS--------------GGVNKSRKGK

Query:  KLGNGGSLKLTVVDFRREIVLHSAGAT-MADR-VADGIGEDEQAAAMLLMALSSGY
        K+G GGSLKL VV   REI++H    T M D  VA+ IGE+EQ AAMLLMALSSGY
Subjt:  KLGNGGSLKLTVVDFRREIVLHSAGAT-MADR-VADGIGEDEQAAAMLLMALSSGY

A0A5A7TUD0 GATA transcription factor 15-like4.4e-3359.21Show/hide
Query:  MASVIDR-PDPSASTFHPSLM-GISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKFKMSS----------GGVNKSRKGKKLGN
        MA +++R  D S STF+PSLM  +S Q   + E++KQR+CV C ATRTPLWR GPAGPRSLCNACGIR+RK KM+S             NK  KGKK+G 
Subjt:  MASVIDR-PDPSASTFHPSLM-GISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKFKMSS----------GGVNKSRKGKKLGN

Query:  GGSLKLTVVDFRREIVLHSAGAT-MADR-VADGIGEDEQAAAMLLMALSSGY
        GGSLKL VV   REI++H    T M D  VA+ IGE+EQ AAMLLMALSSGY
Subjt:  GGSLKLTVVDFRREIVLHSAGAT-MADR-VADGIGEDEQAAAMLLMALSSGY

A0A6J1DGK8 GATA transcription factor 16-like3.5e-70100Show/hide
Query:  MASVIDRPDPSASTFHPSLMGISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKFKMSSGGVNKSRKGKKLGNGGSLKLTVVDFR
        MASVIDRPDPSASTFHPSLMGISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKFKMSSGGVNKSRKGKKLGNGGSLKLTVVDFR
Subjt:  MASVIDRPDPSASTFHPSLMGISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKFKMSSGGVNKSRKGKKLGNGGSLKLTVVDFR

Query:  REIVLHSAGATMADRVADGIGEDEQAAAMLLMALSSGY
        REIVLHSAGATMADRVADGIGEDEQAAAMLLMALSSGY
Subjt:  REIVLHSAGATMADRVADGIGEDEQAAAMLLMALSSGY

A0A6J1H9M3 GATA transcription factor 15-like4.4e-3364.44Show/hide
Query:  DRPDPSASTFHP-SLMGISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKFKMSSGGVNKSRKGKKLGNGGSLKLTVVDFRREIV
        + PD S STF+P SLM ISNQ  L  E QKQR+C  C  TRTPLWR GPAGPRSLCNACGIR+RK K S+GGVNKS  GKK+       + VV   REI+
Subjt:  DRPDPSASTFHP-SLMGISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKFKMSSGGVNKSRKGKKLGNGGSLKLTVVDFRREIV

Query:  LHSAGATMADR-VADGIGEDEQAAAMLLMALSSGY
        LH A A MA+   A+ IGE+EQAAAMLLMALSSGY
Subjt:  LHSAGATMADR-VADGIGEDEQAAAMLLMALSSGY

A0A6J1KR45 GATA transcription factor 15-like9.9e-3362.96Show/hide
Query:  DRPDPSASTFHP-SLMGISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKFKMSSGGVNKSRKGKKLGNGGSLKLTVVDFRREIV
        + PD S STF+P SLM ISNQ  L +E QKQR+C  C  TRTPLWR GPAGPRSLCNACGIR+RK K ++GGVNKS  GKK+       + VV   REI+
Subjt:  DRPDPSASTFHP-SLMGISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKFKMSSGGVNKSRKGKKLGNGGSLKLTVVDFRREIV

Query:  LHSAGATMADR-VADGIGEDEQAAAMLLMALSSGY
        LH   A MA+   A+ IGE+EQAAAMLLMALSSGY
Subjt:  LHSAGATMADR-VADGIGEDEQAAAMLLMALSSGY

SwissProt top hitse value%identityAlignment
Q6YW48 Protein CYTOKININ-RESPONSIVE GATA TRANSCRIPTION FACTOR 11.1e-0960.87Show/hide
Query:  NQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRK
        +Q QL+      R C DC+ T+TPLWR GP GP+SLCNACGIR RK
Subjt:  NQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRK

Q8LC59 GATA transcription factor 239.3e-1239.25Show/hide
Query:  QLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKFKMSS-GGVNKSRKGKKLGNGGSLKLTVVDFRREIVLHSAGATMADRVADGIGEDEQ
        ++K E    R C +C  T+TP+WRGGP GP+SLCNACGIRHRK + S   G++  R  K L +           ++  +L S+   +A +    + E+EQ
Subjt:  QLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKFKMSS-GGVNKSRKGKKLGNGGSLKLTVVDFRREIVLHSAGATMADRVADGIGEDEQ

Query:  AAAMLLM
        AA  LL+
Subjt:  AAAMLLM

Q8LG10 GATA transcription factor 151.4e-1543.22Show/hide
Query:  SNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKFKMSSGGVNKSRKGKKLGN-----GGSLKLTVVDFRREIVLHSAGATMADRVA
        S+ S  ++ S +++SC  C  ++TPLWRGGPAGP+SLCNACGIR+RK + +        K KK  N     G SLK  +++  RE+++    +T  ++  
Subjt:  SNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKFKMSSGGVNKSRKGKKLGN-----GGSLKLTVVDFRREIVLHSAGATMADRVA

Query:  DGIGEDEQAAAMLLMALS
        + +GE+EQ AA+LLMALS
Subjt:  DGIGEDEQAAAMLLMALS

Q9FJ10 GATA transcription factor 163.1e-1544.35Show/hide
Query:  SESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKFKMSSGGVNKSRKGKKLGNGG-------SLKLTVVDFRREIVLHSAGATMADRVADGIGE
        S + K+++C DC  ++TPLWRGGP GP+SLCNACGIR+RK +   GG   ++K KK  +GG       SLK +++D      L     +  ++    +GE
Subjt:  SESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKFKMSSGGVNKSRKGKKLGNGG-------SLKLTVVDFRREIVLHSAGATMADRVADGIGE

Query:  DEQAAAMLLMALSSG
        +EQ AA+LLMALS G
Subjt:  DEQAAAMLLMALSSG

Q9LIB5 GATA transcription factor 171.6e-1156.36Show/hide
Query:  SESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKFKMSSGGVNKSRKGK
        S    +R+CVDC   RTPLWRGGPAGP+SLCNACGI+ RK + ++ G+    K K
Subjt:  SESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKFKMSSGGVNKSRKGK

Arabidopsis top hitse value%identityAlignment
AT3G06740.1 GATA transcription factor 159.8e-1743.22Show/hide
Query:  SNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKFKMSSGGVNKSRKGKKLGN-----GGSLKLTVVDFRREIVLHSAGATMADRVA
        S+ S  ++ S +++SC  C  ++TPLWRGGPAGP+SLCNACGIR+RK + +        K KK  N     G SLK  +++  RE+++    +T  ++  
Subjt:  SNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKFKMSSGGVNKSRKGKKLGN-----GGSLKLTVVDFRREIVLHSAGATMADRVA

Query:  DGIGEDEQAAAMLLMALS
        + +GE+EQ AA+LLMALS
Subjt:  DGIGEDEQAAAMLLMALS

AT3G16870.1 GATA transcription factor 171.1e-1256.36Show/hide
Query:  SESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKFKMSSGGVNKSRKGK
        S    +R+CVDC   RTPLWRGGPAGP+SLCNACGI+ RK + ++ G+    K K
Subjt:  SESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKFKMSSGGVNKSRKGK

AT4G16141.1 GATA type zinc finger transcription factor family protein3.3e-1248.57Show/hide
Query:  NQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKFKMSSGGVN------KSRKGKKLG
        N S   S    +++CVDC  +RTPLWRGGPAGP+SLCNACGI+ RK + ++ G+       KS+    LG
Subjt:  NQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKFKMSSGGVN------KSRKGKKLG

AT5G26930.1 GATA transcription factor 236.6e-1339.25Show/hide
Query:  QLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKFKMSS-GGVNKSRKGKKLGNGGSLKLTVVDFRREIVLHSAGATMADRVADGIGEDEQ
        ++K E    R C +C  T+TP+WRGGP GP+SLCNACGIRHRK + S   G++  R  K L +           ++  +L S+   +A +    + E+EQ
Subjt:  QLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKFKMSS-GGVNKSRKGKKLGNGGSLKLTVVDFRREIVLHSAGATMADRVADGIGEDEQ

Query:  AAAMLLM
        AA  LL+
Subjt:  AAAMLLM

AT5G49300.1 GATA transcription factor 162.2e-1644.35Show/hide
Query:  SESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKFKMSSGGVNKSRKGKKLGNGG-------SLKLTVVDFRREIVLHSAGATMADRVADGIGE
        S + K+++C DC  ++TPLWRGGP GP+SLCNACGIR+RK +   GG   ++K KK  +GG       SLK +++D      L     +  ++    +GE
Subjt:  SESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKFKMSSGGVNKSRKGKKLGNGG-------SLKLTVVDFRREIVLHSAGATMADRVADGIGE

Query:  DEQAAAMLLMALSSG
        +EQ AA+LLMALS G
Subjt:  DEQAAAMLLMALSSG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCCGTCATTGATCGCCCCGATCCCTCTGCTTCGACCTTCCATCCCTCTCTAATGGGTATTTCGAATCAGAGTCAGCTTAAGTCGGAATCTCAGAAACAGAGGAG
CTGCGTCGACTGCCACGCCACCAGAACGCCGCTCTGGAGGGGCGGCCCTGCCGGGCCAAGATCGCTGTGTAATGCGTGTGGGATTAGACACAGGAAGTTCAAGATGAGCA
GTGGGGGAGTGAATAAGAGCCGGAAGGGGAAGAAATTGGGAAATGGGGGTTCGTTGAAGCTCACGGTGGTGGATTTTCGGAGAGAGATAGTGCTACACAGTGCGGGGGCG
ACGATGGCGGATCGAGTTGCAGACGGGATCGGAGAAGATGAACAGGCGGCGGCGATGCTTCTCATGGCTCTCTCTTCCGGCTATAGGATTGGCTCGAGTCTGGGTGTGGA
TATCTTGGAAGATCCGTGGCTTCCAAGAATTGGAAATTTTAAGCCCACTTTTGTGCATAACTCTCTGGAGAATTGCAAGGTCGCGTCGCTAATTAGGGCTCCCGAGGTGT
GGAATGAAGATGCAAGGAACGGTTTCCAGGAAGCTGAAGCTGACTTTATCCTCAATATTCCCCCGAGCAAGAATAGCAACAGGGATGAGATTATTTGGGGCTTTTTGACA
ATAAAGAGATTCTGGAAAGTTCAAGTCCCTCCTAAGATCTTAATTTGCTGCTGGAAGATCATTCAAGATATCATTCCAACCAAGGCAAACCTGGGCTCCAAAGGCATTGT
AACTAATAAGGGATGCCCCTTTTGTCAAGAGAAAGAAGAGACAACAATTCATCTGTTCTTCAATTGCAGGTTTGTTCGAGAACTTTGGGCAATTTATCTGAATCTTAATG
TTGGCTCGTTTTCGTTGGACAGGAATCAAATCGTGCACAATACCACAGAGCAAACATGCATTCAGAAGCTCACGATTCTTATAGAAAGCAAACTTAGAGATTTTTCTAAA
AGTTTTGAAAAGAACCTGCGCTTGGACAACAAAGAAATTTCTGGCTCCTCCGGCTGGATCCTCCCGACGCCTCTCCGATGGAAGCTCAATTCTAACGCTACTTGGATAGA
CTCTTTGAATGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCCGTCATTGATCGCCCCGATCCCTCTGCTTCGACCTTCCATCCCTCTCTAATGGGTATTTCGAATCAGAGTCAGCTTAAGTCGGAATCTCAGAAACAGAGGAG
CTGCGTCGACTGCCACGCCACCAGAACGCCGCTCTGGAGGGGCGGCCCTGCCGGGCCAAGATCGCTGTGTAATGCGTGTGGGATTAGACACAGGAAGTTCAAGATGAGCA
GTGGGGGAGTGAATAAGAGCCGGAAGGGGAAGAAATTGGGAAATGGGGGTTCGTTGAAGCTCACGGTGGTGGATTTTCGGAGAGAGATAGTGCTACACAGTGCGGGGGCG
ACGATGGCGGATCGAGTTGCAGACGGGATCGGAGAAGATGAACAGGCGGCGGCGATGCTTCTCATGGCTCTCTCTTCCGGCTATAGGATTGGCTCGAGTCTGGGTGTGGA
TATCTTGGAAGATCCGTGGCTTCCAAGAATTGGAAATTTTAAGCCCACTTTTGTGCATAACTCTCTGGAGAATTGCAAGGTCGCGTCGCTAATTAGGGCTCCCGAGGTGT
GGAATGAAGATGCAAGGAACGGTTTCCAGGAAGCTGAAGCTGACTTTATCCTCAATATTCCCCCGAGCAAGAATAGCAACAGGGATGAGATTATTTGGGGCTTTTTGACA
ATAAAGAGATTCTGGAAAGTTCAAGTCCCTCCTAAGATCTTAATTTGCTGCTGGAAGATCATTCAAGATATCATTCCAACCAAGGCAAACCTGGGCTCCAAAGGCATTGT
AACTAATAAGGGATGCCCCTTTTGTCAAGAGAAAGAAGAGACAACAATTCATCTGTTCTTCAATTGCAGGTTTGTTCGAGAACTTTGGGCAATTTATCTGAATCTTAATG
TTGGCTCGTTTTCGTTGGACAGGAATCAAATCGTGCACAATACCACAGAGCAAACATGCATTCAGAAGCTCACGATTCTTATAGAAAGCAAACTTAGAGATTTTTCTAAA
AGTTTTGAAAAGAACCTGCGCTTGGACAACAAAGAAATTTCTGGCTCCTCCGGCTGGATCCTCCCGACGCCTCTCCGATGGAAGCTCAATTCTAACGCTACTTGGATAGA
CTCTTTGAATGAATGA
Protein sequenceShow/hide protein sequence
MASVIDRPDPSASTFHPSLMGISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKFKMSSGGVNKSRKGKKLGNGGSLKLTVVDFRREIVLHSAGA
TMADRVADGIGEDEQAAAMLLMALSSGYRIGSSLGVDILEDPWLPRIGNFKPTFVHNSLENCKVASLIRAPEVWNEDARNGFQEAEADFILNIPPSKNSNRDEIIWGFLT
IKRFWKVQVPPKILICCWKIIQDIIPTKANLGSKGIVTNKGCPFCQEKEETTIHLFFNCRFVRELWAIYLNLNVGSFSLDRNQIVHNTTEQTCIQKLTILIESKLRDFSK
SFEKNLRLDNKEISGSSGWILPTPLRWKLNSNATWIDSLNE