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Moc09g06560 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g06560
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionleucine-rich repeat extensin-like protein 3
Genome locationchr9:5110331..5110780
RNA-Seq ExpressionMoc09g06560
SyntenyMoc09g06560
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046672.1 extensin-2 [Cucumis melo var. makuwa]2.4e-3264.67Show/hide
Query:  MAHFISIAISIIF----TFSLISPAMAAVAKDQLTCSMCSSCDNPCQI--PPPPPPVVDC-----PPPPPPPPPPLPTSECPPPPPSPPPPSCDACVYPS
        MA+FI I ++        FSL+S A +AVAKDQ+ CSMCS+CDNPCQ+  PPPPPPVV+C     PPPPP PPPPLPTS+CPPP   P PPSCDACVYPS
Subjt:  MAHFISIAISIIF----TFSLISPAMAAVAKDQLTCSMCSSCDNPCQI--PPPPPPVVDC-----PPPPPPPPPPLPTSECPPPPPSPPPPSCDACVYPS

Query:  PP--------PPANGGQFPGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRLG-LLIILC
        PP        PP++GGQFPGI  APPPPNPILPYFPYYY +PPSAS  SV  S K+L L  L+IILC
Subjt:  PP--------PPANGGQFPGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRLG-LLIILC

KAG6575794.1 hypothetical protein SDJN03_26433, partial [Cucurbita argyrosperma subsp. sororia]3.2e-2961.39Show/hide
Query:  MAHFISIAISI-IFTFSLISPAMAAV-AKDQLTCSMCSSCDNPCQIPPPPPPVVDC-------PPPPPPPPPPLPTSECPPPPPSPPPPSCDACVYPSPP
        MA   SI +++ + + S  SP+ A V A+DQ+ CSMC+SCDNPCQ+PPPPP +VDC       PPPPP PPPPLPT ECPPP   P PPSCDACVYPSPP
Subjt:  MAHFISIAISI-IFTFSLISPAMAAV-AKDQLTCSMCSSCDNPCQIPPPPPPVVDC-------PPPPPPPPPPLPTSECPPPPPSPPPPSCDACVYPSPP

Query:  P---PANGGQFPGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRLGLLIIL
        P   P +GGQ+PG  LAPPPPNPILPYFPYYY  PPS S  SV  S K L L  ++ L
Subjt:  P---PANGGQFPGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRLGLLIIL

XP_022991777.1 leucine-rich repeat extensin-like protein 3 [Cucurbita maxima]3.8e-3062.58Show/hide
Query:  MAHFISIAISI-IFTFSLISPAMAAV-AKDQLTCSMCSSCDNPCQIPPPPPP-----VVDCPPPPPPPPPPLPTSECPPPPPSPPPPSCDACVYPSPPPP
        MA   SI +++ +F+ S  S ++A V A+DQ+ CSMCSSCDNPCQ+PPPPPP     VVDCPPPP PPPPPLP  ECPPP   P PPSCDACVYPSPPPP
Subjt:  MAHFISIAISI-IFTFSLISPAMAAV-AKDQLTCSMCSSCDNPCQIPPPPPP-----VVDCPPPPPPPPPPLPTSECPPPPPSPPPPSCDACVYPSPPPP

Query:  A--------NGGQFPGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRL
        +        +GGQ+PG+  APPPPNPILPYFPYYY  PPS S  SV  S K L L
Subjt:  A--------NGGQFPGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRL

XP_023004682.1 glyceraldehyde-3-phosphate dehydrogenase, testis-specific-like [Cucurbita maxima]1.3e-3061.25Show/hide
Query:  MAHFISIAIS-IIFT---FSLISPAMAAVAKDQLTCSMCSSCDNPCQIPPPPPPVVDCPPPPPPPPPPLPTSECPPPPPSPPPPSCDACVYPSPPP----
        MA+ +SI  + ++FT   FS +S A  AVAKDQ+ CSMCSSCDNPCQ+PPPPPP               PTS+CPPPPP PPPPSC  CV+PSP P    
Subjt:  MAHFISIAIS-IIFT---FSLISPAMAAVAKDQLTCSMCSSCDNPCQIPPPPPPVVDCPPPPPPPPPPLPTSECPPPPPSPPPPSCDACVYPSPPP----

Query:  ----PANGGQFPGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRLGLLIILCL
            PA+GGQFPG+A  PPPPNPILPY+PYYY +PP+AS  SVSIS KIL LGLLII+CL
Subjt:  ----PANGGQFPGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRLGLLIILCL

XP_023514546.1 leucine-rich repeat extensin-like protein 6 [Cucurbita pepo subsp. pepo]2.5e-2959.38Show/hide
Query:  MAHFISIAIS-IIFT---FSLISPAMAAVAKDQLTCSMCSSCDNPCQIPPPPPPVVDCPPPPPPPPPPLPTSECPPPPPSPPPPSCDACVYPSPPP----
        M + +SI  + ++FT   FS +S A  AVAKDQ+ CSMCSSCDNPCQ+PPPPPP               PTS+CPPP   PPPPSC  C++PSP P    
Subjt:  MAHFISIAIS-IIFT---FSLISPAMAAVAKDQLTCSMCSSCDNPCQIPPPPPPVVDCPPPPPPPPPPLPTSECPPPPPSPPPPSCDACVYPSPPP----

Query:  ----PANGGQFPGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRLGLLIILCL
            PA+GGQFPG  LAPPPPNPILPY+PYYY +PP+AS  SVSIS KIL LGLLII+CL
Subjt:  ----PANGGQFPGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRLGLLIILCL

TrEMBL top hitse value%identityAlignment
A0A0A0K5N4 Uncharacterized protein1.5e-3264.85Show/hide
Query:  MAHFISIAISI----IFTFSLISPAMAAVAKDQLTCSMCSSCDNPCQI--PPPPPPVVDCP-----PPPPPPPPPLPTSECPPPPPSPPPPSCDACVYPS
        MA+ ISI ++     +  FSL+S A  AVAKDQ+ CSMCS+CDNPCQ+  PPPPPPVV+CP     PPPP PPPPLPTS+CPPP   P PPSCDACVYPS
Subjt:  MAHFISIAISI----IFTFSLISPAMAAVAKDQLTCSMCSSCDNPCQI--PPPPPPVVDCP-----PPPPPPPPPLPTSECPPPPPSPPPPSCDACVYPS

Query:  PPPPAN--------GGQFPGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRLGLLIIL
        PPPP++        GGQFPGI  APPPPNPILPYFPYYY +PPSAS  SV  S K L L  LIIL
Subjt:  PPPPAN--------GGQFPGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRLGLLIIL

A0A5D3D2P5 Extensin-21.2e-3264.67Show/hide
Query:  MAHFISIAISIIF----TFSLISPAMAAVAKDQLTCSMCSSCDNPCQI--PPPPPPVVDC-----PPPPPPPPPPLPTSECPPPPPSPPPPSCDACVYPS
        MA+FI I ++        FSL+S A +AVAKDQ+ CSMCS+CDNPCQ+  PPPPPPVV+C     PPPPP PPPPLPTS+CPPP   P PPSCDACVYPS
Subjt:  MAHFISIAISIIF----TFSLISPAMAAVAKDQLTCSMCSSCDNPCQI--PPPPPPVVDC-----PPPPPPPPPPLPTSECPPPPPSPPPPSCDACVYPS

Query:  PP--------PPANGGQFPGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRLG-LLIILC
        PP        PP++GGQFPGI  APPPPNPILPYFPYYY +PPSAS  SV  S K+L L  L+IILC
Subjt:  PP--------PPANGGQFPGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRLG-LLIILC

A0A6J1GPW6 leucine-rich repeat extensin-like protein 32.3e-2858.86Show/hide
Query:  FISIAISIIFTFSLISPAMAAVAKDQLTCSMCSSCDNPCQIPPPPPPVVDCPPPPPPPPPPLP-------TSECPPPPPSPPPPSCDACVYPSPPPPA--
        F+++ +  +  FSL SP ++  A+DQ+ CSMC+SCDNPCQ+PPPPP +VDCPPPP PPPPP P       T ECPPP   P PPSCDACVYPSPPPP+  
Subjt:  FISIAISIIFTFSLISPAMAAVAKDQLTCSMCSSCDNPCQIPPPPPPVVDCPPPPPPPPPPLP-------TSECPPPPPSPPPPSCDACVYPSPPPPA--

Query:  ------NGGQFPGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRLGLLIIL
              +GGQ+PG  LAPPPPNPILPYFPYYY  PPS S  SV  S K L L  ++ L
Subjt:  ------NGGQFPGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRLGLLIIL

A0A6J1JMT5 leucine-rich repeat extensin-like protein 31.8e-3062.58Show/hide
Query:  MAHFISIAISI-IFTFSLISPAMAAV-AKDQLTCSMCSSCDNPCQIPPPPPP-----VVDCPPPPPPPPPPLPTSECPPPPPSPPPPSCDACVYPSPPPP
        MA   SI +++ +F+ S  S ++A V A+DQ+ CSMCSSCDNPCQ+PPPPPP     VVDCPPPP PPPPPLP  ECPPP   P PPSCDACVYPSPPPP
Subjt:  MAHFISIAISI-IFTFSLISPAMAAV-AKDQLTCSMCSSCDNPCQIPPPPPP-----VVDCPPPPPPPPPPLPTSECPPPPPSPPPPSCDACVYPSPPPP

Query:  A--------NGGQFPGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRL
        +        +GGQ+PG+  APPPPNPILPYFPYYY  PPS S  SV  S K L L
Subjt:  A--------NGGQFPGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRL

A0A6J1KR41 glyceraldehyde-3-phosphate dehydrogenase, testis-specific-like6.3e-3161.25Show/hide
Query:  MAHFISIAIS-IIFT---FSLISPAMAAVAKDQLTCSMCSSCDNPCQIPPPPPPVVDCPPPPPPPPPPLPTSECPPPPPSPPPPSCDACVYPSPPP----
        MA+ +SI  + ++FT   FS +S A  AVAKDQ+ CSMCSSCDNPCQ+PPPPPP               PTS+CPPPPP PPPPSC  CV+PSP P    
Subjt:  MAHFISIAIS-IIFT---FSLISPAMAAVAKDQLTCSMCSSCDNPCQIPPPPPPVVDCPPPPPPPPPPLPTSECPPPPPSPPPPSCDACVYPSPPP----

Query:  ----PANGGQFPGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRLGLLIILCL
            PA+GGQFPG+A  PPPPNPILPY+PYYY +PP+AS  SVSIS KIL LGLLII+CL
Subjt:  ----PANGGQFPGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRLGLLIILCL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G16140.1 proline-rich family protein2.2e-0741.98Show/hide
Query:  HFISIAISIIFTFSLISPAMAAVAKDQLTCSMCSSCDNPCQIPPPPPPVVDCPPPPPPPPPPLP-TSECPPPPPSP--------PPPSCDACVYPSP---
        H         FT +L SP+  A       C+MC+SCDNPCQ  P PPP    PP  P PPPP P T+ CPPPP S         PP S      P P   
Subjt:  HFISIAISIIFTFSLISPAMAAVAKDQLTCSMCSSCDNPCQIPPPPPPVVDCPPPPPPPPPPLP-TSECPPPPPSP--------PPPSCDACVYPSP---

Query:  ------PPPANGGQFPGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRLGLLIIL
              PPP +GG +P      PPPNPI+PYFP+YY NPP  S  S S +      G+  IL
Subjt:  ------PPPANGGQFPGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRLGLLIIL

AT5G49280.1 hydroxyproline-rich glycoprotein family protein5.5e-1140.88Show/hide
Query:  ISIIFTFSLISPAMAAVAKDQ-LTCSMCSSCDNPCQIPPPPPPVVDCPPPPPPPPPPLPTSECPPPPPSP----------PPPSCDACVYPSPPPPANGG
        +S +    L+S      +KD+ ++C+MCSSCDNPC       PV   PPPP PPPP  PT+ CPPPP  P          PPPS        PPP   GG
Subjt:  ISIIFTFSLISPAMAAVAKDQ-LTCSMCSSCDNPCQIPPPPPPVVDCPPPPPPPPPPLPTSECPPPPPSP----------PPPSCDACVYPSPPPPANGG

Query:  Q-------FPGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRLGLL-IILCL
        Q       + G    PPPPNPI+PYFP+YY  PP  S +   +S   +   L  + LCL
Subjt:  Q-------FPGIALAPPPPNPILPYFPYYYLNPPSASANSVSISLKILRLGLL-IILCL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCATTTCATCTCCATCGCCATCTCCATCATTTTCACTTTTTCCTTAATTTCGCCTGCAATGGCCGCCGTCGCCAAGGATCAACTCACCTGTTCCATGTGCTCAAG
TTGCGACAATCCCTGCCAAATTCCGCCGCCGCCTCCGCCGGTCGTTGACTGCCCTCCTCCTCCACCGCCTCCTCCGCCGCCGCTCCCCACTTCCGAATGCCCCCCTCCTC
CCCCTTCTCCGCCGCCCCCCTCCTGCGACGCCTGCGTCTACCCTTCCCCGCCGCCGCCGGCCAACGGCGGGCAGTTTCCCGGGATTGCCCTTGCCCCGCCGCCGCCGAAC
CCAATTTTGCCGTATTTTCCTTACTATTATCTGAATCCCCCTTCGGCTTCTGCCAATTCCGTCTCGATTTCATTGAAGATTCTGCGTTTGGGTTTATTAATCATTCTCTG
CCTCTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCCATTTCATCTCCATCGCCATCTCCATCATTTTCACTTTTTCCTTAATTTCGCCTGCAATGGCCGCCGTCGCCAAGGATCAACTCACCTGTTCCATGTGCTCAAG
TTGCGACAATCCCTGCCAAATTCCGCCGCCGCCTCCGCCGGTCGTTGACTGCCCTCCTCCTCCACCGCCTCCTCCGCCGCCGCTCCCCACTTCCGAATGCCCCCCTCCTC
CCCCTTCTCCGCCGCCCCCCTCCTGCGACGCCTGCGTCTACCCTTCCCCGCCGCCGCCGGCCAACGGCGGGCAGTTTCCCGGGATTGCCCTTGCCCCGCCGCCGCCGAAC
CCAATTTTGCCGTATTTTCCTTACTATTATCTGAATCCCCCTTCGGCTTCTGCCAATTCCGTCTCGATTTCATTGAAGATTCTGCGTTTGGGTTTATTAATCATTCTCTG
CCTCTATTAA
Protein sequenceShow/hide protein sequence
MAHFISIAISIIFTFSLISPAMAAVAKDQLTCSMCSSCDNPCQIPPPPPPVVDCPPPPPPPPPPLPTSECPPPPPSPPPPSCDACVYPSPPPPANGGQFPGIALAPPPPN
PILPYFPYYYLNPPSASANSVSISLKILRLGLLIILCLY