; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc09g06860 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g06860
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionlarge ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic
Genome locationchr9:5394102..5404702
RNA-Seq ExpressionMoc09g06860
SyntenyMoc09g06860
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
InterPro domainsIPR003772 - Large ribosomal RNA subunit accumulation protein YceD


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067976.1 uncharacterized protein E6C27_scaffold138G001640 [Cucumis melo var. makuwa]5.2e-13279.34Show/hide
Query:  LTLCFLKSKGNASFNSNFRFVGCKVP--FTENIQATM------LKFASLKGVKPAYQSLFEDNIIISDWEDQEGDTEEMGSPWEGAVTYKRNSSVSHVEY
        + + + KSKGN SFNS+FR     VP  F  NIQ ++      +K  S+K VKP YQSLFEDN II+DW DQEGD EEMGSPWEGAV YKRNSSVSHVEY
Subjt:  LTLCFLKSKGNASFNSNFRFVGCKVP--FTENIQATM------LKFASLKGVKPAYQSLFEDNIIISDWEDQEGDTEEMGSPWEGAVTYKRNSSVSHVEY

Query:  CTTLERLGFEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISIDVTRKEKKLRLDGIVKTVITLDCYRCCEPAAECVFSNFSLILSEEPIEEPEVINM
        CTTLERLG EKLSTDVSKSRAS MGLRVTK VKDYPFGTPVQIS+DVTRK+KKLRLDGIVKTVITL+CYRCCEPA EC+FSNFS++LSEEPIEEP+VINM
Subjt:  CTTLERLGFEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISIDVTRKEKKLRLDGIVKTVITLDCYRCCEPAAECVFSNFSLILSEEPIEEPEVINM

Query:  GIISGQDKFMTFDQNSDQDDEELIDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICNPGCKGMCLRCGINLNIGSCNCSKQDVKKNDFGPLGNLKRQ
        GIISGQD F T + NSD+DDEE +DLDDQLYFPPV+KEIDISKNIRDILHLEITMN ICNPGCKGMCL CGINLN GSCNCSKQ VKKNDFGPLGNLKR+
Subjt:  GIISGQDKFMTFDQNSDQDDEELIDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICNPGCKGMCLRCGINLNIGSCNCSKQDVKKNDFGPLGNLKRQ

Query:  MQKNS
        MQ NS
Subjt:  MQKNS

XP_008451550.1 PREDICTED: uncharacterized protein LOC103492797 isoform X1 [Cucumis melo]7.5e-13178.69Show/hide
Query:  LTLCFLKSKGNASFNSNFRFVGCKVP--FTENIQATM------LKFASLKGVKPAYQSLFEDNIIISDWEDQEGDTEEMGSPWEGAVTYKRNSSVSHVEY
        + + + +SKGN SFNS+FR     VP  F  NIQ ++      +K  S+K VKP YQSLFEDN II+DW DQEGD EEM SPWEGAV YKRNSSVSHVEY
Subjt:  LTLCFLKSKGNASFNSNFRFVGCKVP--FTENIQATM------LKFASLKGVKPAYQSLFEDNIIISDWEDQEGDTEEMGSPWEGAVTYKRNSSVSHVEY

Query:  CTTLERLGFEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISIDVTRKEKKLRLDGIVKTVITLDCYRCCEPAAECVFSNFSLILSEEPIEEPEVINM
        CTTLERLG EKLSTDVSKSRAS MGLRVTK VKDYPFGTPVQIS+DVTRK+KKLRLDGIVKTVITL+CYRCCEPA EC+FSNFS++LSEEPIEEP+VINM
Subjt:  CTTLERLGFEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISIDVTRKEKKLRLDGIVKTVITLDCYRCCEPAAECVFSNFSLILSEEPIEEPEVINM

Query:  GIISGQDKFMTFDQNSDQDDEELIDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICNPGCKGMCLRCGINLNIGSCNCSKQDVKKNDFGPLGNLKRQ
        GIISGQD F T + NSD+DDEE +DLDDQLYFPPV+KEIDISKNIRDILHLEITMN ICNPGCKGMCL CGINLN GSCNCSKQ VKKNDFGPLGNLKR+
Subjt:  GIISGQDKFMTFDQNSDQDDEELIDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICNPGCKGMCLRCGINLNIGSCNCSKQDVKKNDFGPLGNLKRQ

Query:  MQKNS
        MQ NS
Subjt:  MQKNS

XP_008451552.1 PREDICTED: uncharacterized protein LOC103492797 isoform X2 [Cucumis melo]7.5e-13178.69Show/hide
Query:  LTLCFLKSKGNASFNSNFRFVGCKVP--FTENIQATM------LKFASLKGVKPAYQSLFEDNIIISDWEDQEGDTEEMGSPWEGAVTYKRNSSVSHVEY
        + + + +SKGN SFNS+FR     VP  F  NIQ ++      +K  S+K VKP YQSLFEDN II+DW DQEGD EEM SPWEGAV YKRNSSVSHVEY
Subjt:  LTLCFLKSKGNASFNSNFRFVGCKVP--FTENIQATM------LKFASLKGVKPAYQSLFEDNIIISDWEDQEGDTEEMGSPWEGAVTYKRNSSVSHVEY

Query:  CTTLERLGFEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISIDVTRKEKKLRLDGIVKTVITLDCYRCCEPAAECVFSNFSLILSEEPIEEPEVINM
        CTTLERLG EKLSTDVSKSRAS MGLRVTK VKDYPFGTPVQIS+DVTRK+KKLRLDGIVKTVITL+CYRCCEPA EC+FSNFS++LSEEPIEEP+VINM
Subjt:  CTTLERLGFEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISIDVTRKEKKLRLDGIVKTVITLDCYRCCEPAAECVFSNFSLILSEEPIEEPEVINM

Query:  GIISGQDKFMTFDQNSDQDDEELIDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICNPGCKGMCLRCGINLNIGSCNCSKQDVKKNDFGPLGNLKRQ
        GIISGQD F T + NSD+DDEE +DLDDQLYFPPV+KEIDISKNIRDILHLEITMN ICNPGCKGMCL CGINLN GSCNCSKQ VKKNDFGPLGNLKR+
Subjt:  GIISGQDKFMTFDQNSDQDDEELIDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICNPGCKGMCLRCGINLNIGSCNCSKQDVKKNDFGPLGNLKRQ

Query:  MQKNS
        MQ NS
Subjt:  MQKNS

XP_022155011.1 large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic [Momordica charantia]3.8e-16799.33Show/hide
Query:  LTLCFLKSKGNASFNSNFRFVGCKVPFTENIQATMLKFASLKGVKPAYQSLFEDNIIISDWEDQEGDTEEMGSPWEGAVTYKRNSSVSHVEYCTTLERLG
        + LCFLKSKGNASFNSNFRFVGCKVPFTENIQATMLKFASLKGVKPAYQSLFEDNIIISDWEDQEGDTEEMGSPWEGAVTYKRNSSVSHVEYCTTLERLG
Subjt:  LTLCFLKSKGNASFNSNFRFVGCKVPFTENIQATMLKFASLKGVKPAYQSLFEDNIIISDWEDQEGDTEEMGSPWEGAVTYKRNSSVSHVEYCTTLERLG

Query:  FEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISIDVTRKEKKLRLDGIVKTVITLDCYRCCEPAAECVFSNFSLILSEEPIEEPEVINMGIISGQDK
        FEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISIDVTRKEKKLRLDGIVKTVITLDCYRCCEPAAECVFSNFSLILSEEPIEEPEVINMGIISGQDK
Subjt:  FEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISIDVTRKEKKLRLDGIVKTVITLDCYRCCEPAAECVFSNFSLILSEEPIEEPEVINMGIISGQDK

Query:  FMTFDQNSDQDDEELIDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICNPGCKGMCLRCGINLNIGSCNCSKQDVKKNDFGPLGNLKRQMQKNS
        FMTFDQNSDQDDEELIDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICNPGCKGMCLRCGINLNIGSCNCSKQDVKKNDFGPLGNLKRQMQKNS
Subjt:  FMTFDQNSDQDDEELIDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICNPGCKGMCLRCGINLNIGSCNCSKQDVKKNDFGPLGNLKRQMQKNS

XP_038897008.1 large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic-like [Benincasa hispida]1.2e-13181.06Show/hide
Query:  FLKSKGNASFNSNFRFVGCKVP--FTENIQAT------MLKFASLKGVKPAYQSLFEDNIIISDWEDQEGDTEEMGSPWEGAVTYKRNSSVSHVEYCTTL
        +LKSKGN SF+S+     C+VP  F  NIQ +      MLK  S+K VKP YQSLFEDN II+DWED +GD EEMGSPWEGAV YKRNSSVSHVEYCTTL
Subjt:  FLKSKGNASFNSNFRFVGCKVP--FTENIQAT------MLKFASLKGVKPAYQSLFEDNIIISDWEDQEGDTEEMGSPWEGAVTYKRNSSVSHVEYCTTL

Query:  ERLGFEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISIDVTRKEKKLRLDGIVKTVITLDCYRCCEPAAECVFSNFSLILSEEPIEEPEVINMGIIS
        ERLG EKLSTDVSKSRAS MGLRV K VKDYPFGTPVQIS+DVTRKEKKLRLDGIVKTVITL+CYRCCE A EC+FSNFS+ILSEEPIEEP+VINMGIIS
Subjt:  ERLGFEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISIDVTRKEKKLRLDGIVKTVITLDCYRCCEPAAECVFSNFSLILSEEPIEEPEVINMGIIS

Query:  GQDKFMTFDQNSDQDDEELIDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICNPGCKGMCLRCGINLNIGSCNCSKQDVKKNDFGPLGNLKRQMQKN
        GQD F T+D NSD+DDEEL+DLDDQLYFP +EKEIDISKNIRDILHLEITMNAIC+PGCKGMCL CGINLN GSCNCSKQ VKKNDFGPLGNLK+QMQKN
Subjt:  GQDKFMTFDQNSDQDDEELIDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICNPGCKGMCLRCGINLNIGSCNCSKQDVKKNDFGPLGNLKRQMQKN

Query:  S
        S
Subjt:  S

TrEMBL top hitse value%identityAlignment
A0A1S3BR50 uncharacterized protein LOC103492797 isoform X23.6e-13178.69Show/hide
Query:  LTLCFLKSKGNASFNSNFRFVGCKVP--FTENIQATM------LKFASLKGVKPAYQSLFEDNIIISDWEDQEGDTEEMGSPWEGAVTYKRNSSVSHVEY
        + + + +SKGN SFNS+FR     VP  F  NIQ ++      +K  S+K VKP YQSLFEDN II+DW DQEGD EEM SPWEGAV YKRNSSVSHVEY
Subjt:  LTLCFLKSKGNASFNSNFRFVGCKVP--FTENIQATM------LKFASLKGVKPAYQSLFEDNIIISDWEDQEGDTEEMGSPWEGAVTYKRNSSVSHVEY

Query:  CTTLERLGFEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISIDVTRKEKKLRLDGIVKTVITLDCYRCCEPAAECVFSNFSLILSEEPIEEPEVINM
        CTTLERLG EKLSTDVSKSRAS MGLRVTK VKDYPFGTPVQIS+DVTRK+KKLRLDGIVKTVITL+CYRCCEPA EC+FSNFS++LSEEPIEEP+VINM
Subjt:  CTTLERLGFEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISIDVTRKEKKLRLDGIVKTVITLDCYRCCEPAAECVFSNFSLILSEEPIEEPEVINM

Query:  GIISGQDKFMTFDQNSDQDDEELIDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICNPGCKGMCLRCGINLNIGSCNCSKQDVKKNDFGPLGNLKRQ
        GIISGQD F T + NSD+DDEE +DLDDQLYFPPV+KEIDISKNIRDILHLEITMN ICNPGCKGMCL CGINLN GSCNCSKQ VKKNDFGPLGNLKR+
Subjt:  GIISGQDKFMTFDQNSDQDDEELIDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICNPGCKGMCLRCGINLNIGSCNCSKQDVKKNDFGPLGNLKRQ

Query:  MQKNS
        MQ NS
Subjt:  MQKNS

A0A1S3BSU8 uncharacterized protein LOC103492797 isoform X13.6e-13178.69Show/hide
Query:  LTLCFLKSKGNASFNSNFRFVGCKVP--FTENIQATM------LKFASLKGVKPAYQSLFEDNIIISDWEDQEGDTEEMGSPWEGAVTYKRNSSVSHVEY
        + + + +SKGN SFNS+FR     VP  F  NIQ ++      +K  S+K VKP YQSLFEDN II+DW DQEGD EEM SPWEGAV YKRNSSVSHVEY
Subjt:  LTLCFLKSKGNASFNSNFRFVGCKVP--FTENIQATM------LKFASLKGVKPAYQSLFEDNIIISDWEDQEGDTEEMGSPWEGAVTYKRNSSVSHVEY

Query:  CTTLERLGFEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISIDVTRKEKKLRLDGIVKTVITLDCYRCCEPAAECVFSNFSLILSEEPIEEPEVINM
        CTTLERLG EKLSTDVSKSRAS MGLRVTK VKDYPFGTPVQIS+DVTRK+KKLRLDGIVKTVITL+CYRCCEPA EC+FSNFS++LSEEPIEEP+VINM
Subjt:  CTTLERLGFEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISIDVTRKEKKLRLDGIVKTVITLDCYRCCEPAAECVFSNFSLILSEEPIEEPEVINM

Query:  GIISGQDKFMTFDQNSDQDDEELIDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICNPGCKGMCLRCGINLNIGSCNCSKQDVKKNDFGPLGNLKRQ
        GIISGQD F T + NSD+DDEE +DLDDQLYFPPV+KEIDISKNIRDILHLEITMN ICNPGCKGMCL CGINLN GSCNCSKQ VKKNDFGPLGNLKR+
Subjt:  GIISGQDKFMTFDQNSDQDDEELIDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICNPGCKGMCLRCGINLNIGSCNCSKQDVKKNDFGPLGNLKRQ

Query:  MQKNS
        MQ NS
Subjt:  MQKNS

A0A5A7VN29 Uncharacterized protein2.5e-13279.34Show/hide
Query:  LTLCFLKSKGNASFNSNFRFVGCKVP--FTENIQATM------LKFASLKGVKPAYQSLFEDNIIISDWEDQEGDTEEMGSPWEGAVTYKRNSSVSHVEY
        + + + KSKGN SFNS+FR     VP  F  NIQ ++      +K  S+K VKP YQSLFEDN II+DW DQEGD EEMGSPWEGAV YKRNSSVSHVEY
Subjt:  LTLCFLKSKGNASFNSNFRFVGCKVP--FTENIQATM------LKFASLKGVKPAYQSLFEDNIIISDWEDQEGDTEEMGSPWEGAVTYKRNSSVSHVEY

Query:  CTTLERLGFEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISIDVTRKEKKLRLDGIVKTVITLDCYRCCEPAAECVFSNFSLILSEEPIEEPEVINM
        CTTLERLG EKLSTDVSKSRAS MGLRVTK VKDYPFGTPVQIS+DVTRK+KKLRLDGIVKTVITL+CYRCCEPA EC+FSNFS++LSEEPIEEP+VINM
Subjt:  CTTLERLGFEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISIDVTRKEKKLRLDGIVKTVITLDCYRCCEPAAECVFSNFSLILSEEPIEEPEVINM

Query:  GIISGQDKFMTFDQNSDQDDEELIDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICNPGCKGMCLRCGINLNIGSCNCSKQDVKKNDFGPLGNLKRQ
        GIISGQD F T + NSD+DDEE +DLDDQLYFPPV+KEIDISKNIRDILHLEITMN ICNPGCKGMCL CGINLN GSCNCSKQ VKKNDFGPLGNLKR+
Subjt:  GIISGQDKFMTFDQNSDQDDEELIDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICNPGCKGMCLRCGINLNIGSCNCSKQDVKKNDFGPLGNLKRQ

Query:  MQKNS
        MQ NS
Subjt:  MQKNS

A0A5D3D2J4 Uncharacterized protein6.2e-13178.88Show/hide
Query:  LTLCFLKSKGNASFNSNFRFVGCKVPFTENIQATM------LKFASLKGVKPAYQSLFEDNIIISDWEDQEGDTEEMGSPWEGAVTYKRNSSVSHVEYCT
        + + + KSKGN SFNS  R       F  NIQ ++      +K  S+K VKP YQSLFEDN II+DW DQEGD EEMGSPWEGAV YKRNSSVSHVEYCT
Subjt:  LTLCFLKSKGNASFNSNFRFVGCKVPFTENIQATM------LKFASLKGVKPAYQSLFEDNIIISDWEDQEGDTEEMGSPWEGAVTYKRNSSVSHVEYCT

Query:  TLERLGFEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISIDVTRKEKKLRLDGIVKTVITLDCYRCCEPAAECVFSNFSLILSEEPIEEPEVINMGI
        TLERLG EKLSTDVSKSRAS MGLRVTK VKDYPFGTPVQIS+DVTRK+KKLRLDGIVKTVITL+CYRCCEPA EC+FSNFS++LSEEPIEEP+VINMGI
Subjt:  TLERLGFEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISIDVTRKEKKLRLDGIVKTVITLDCYRCCEPAAECVFSNFSLILSEEPIEEPEVINMGI

Query:  ISGQDKFMTFDQNSDQDDEELIDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICNPGCKGMCLRCGINLNIGSCNCSKQDVKKNDFGPLGNLKRQMQ
        ISGQD F T + NSD+DDEE +DLDDQLYFPPV+KEIDISKNIRDILHLEITMN ICNPGCKGMCL CGINLN GSCNCSKQ VKKNDFGPLGNLKR+MQ
Subjt:  ISGQDKFMTFDQNSDQDDEELIDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICNPGCKGMCLRCGINLNIGSCNCSKQDVKKNDFGPLGNLKRQMQ

Query:  KNS
         NS
Subjt:  KNS

A0A6J1DQF0 large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic1.8e-16799.33Show/hide
Query:  LTLCFLKSKGNASFNSNFRFVGCKVPFTENIQATMLKFASLKGVKPAYQSLFEDNIIISDWEDQEGDTEEMGSPWEGAVTYKRNSSVSHVEYCTTLERLG
        + LCFLKSKGNASFNSNFRFVGCKVPFTENIQATMLKFASLKGVKPAYQSLFEDNIIISDWEDQEGDTEEMGSPWEGAVTYKRNSSVSHVEYCTTLERLG
Subjt:  LTLCFLKSKGNASFNSNFRFVGCKVPFTENIQATMLKFASLKGVKPAYQSLFEDNIIISDWEDQEGDTEEMGSPWEGAVTYKRNSSVSHVEYCTTLERLG

Query:  FEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISIDVTRKEKKLRLDGIVKTVITLDCYRCCEPAAECVFSNFSLILSEEPIEEPEVINMGIISGQDK
        FEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISIDVTRKEKKLRLDGIVKTVITLDCYRCCEPAAECVFSNFSLILSEEPIEEPEVINMGIISGQDK
Subjt:  FEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISIDVTRKEKKLRLDGIVKTVITLDCYRCCEPAAECVFSNFSLILSEEPIEEPEVINMGIISGQDK

Query:  FMTFDQNSDQDDEELIDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICNPGCKGMCLRCGINLNIGSCNCSKQDVKKNDFGPLGNLKRQMQKNS
        FMTFDQNSDQDDEELIDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICNPGCKGMCLRCGINLNIGSCNCSKQDVKKNDFGPLGNLKRQMQKNS
Subjt:  FMTFDQNSDQDDEELIDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICNPGCKGMCLRCGINLNIGSCNCSKQDVKKNDFGPLGNLKRQMQKNS

SwissProt top hitse value%identityAlignment
A0A1D6HQ92 Large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic4.2e-5250.7Show/hide
Query:  SPWEGAVTYKRNSSVSHVEYCTTLERLGFEKLSTDVSKSRASKMGLR--VTKAVKDYPFGTPVQISIDVTRKEKKLRLDGIVKTVITLDCYRCCEPAAEC
        SPWEGAV Y+R+++V H+EY +TLERLG   LS+  S++RA+ +GL      +    P  TPV +S+DVTR+  +LRLDGIV+TVITL C+RC EPA + 
Subjt:  SPWEGAVTYKRNSSVSHVEYCTTLERLGFEKLSTDVSKSRASKMGLR--VTKAVKDYPFGTPVQISIDVTRKEKKLRLDGIVKTVITLDCYRCCEPAAEC

Query:  VFSNFSLILSEEPIEEPEVINMGIISGQDK---FMTFDQNSDQDDEELIDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICNPGCKGMCLRCGINLN
        +F+NFSL+L+E+P+EE   +        DK    +    + DQD    ID DD+L+FP  +KEIDISK+IRD++HLEIT++A+CNP CKG+CL CG NLN
Subjt:  VFSNFSLILSEEPIEEPEVINMGIISGQDK---FMTFDQNSDQDDEELIDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICNPGCKGMCLRCGINLN

Query:  -IGSCNCSKQDVK
           SC C  ++V+
Subjt:  -IGSCNCSKQDVK

O81417 Protein SEED AND ROOT HAIR PROTECTIVE PROTEIN1.5e-3351.09Show/hide
Query:  YGEEAPAP----LTIAVEGVVSCKTGSKYSPLKGVVARITCVALNEKGNEVAPFSFSSFPTDEHGYFLATLSPSKLKGKAKVTQCKTFLPPSPCEDCKYP
        YG EA       + IAVEG++ CK+G K  P++G  ARI CV ++  GNE+ P S  S  TD  GYF+AT+ PS+L+    VT+CKT+L  SP  DC +P
Subjt:  YGEEAPAP----LTIAVEGVVSCKTGSKYSPLKGVVARITCVALNEKGNEVAPFSFSSFPTDEHGYFLATLSPSKLKGKAKVTQCKTFLPPSPCEDCKYP

Query:  TDINNGVTGALFSSFRILTNKKMKLYSVGPFFYTSEP
        TD+N GV G   S++RIL +K  KLY  GPFFYTSEP
Subjt:  TDINNGVTGALFSSFRILTNKKMKLYSVGPFFYTSEP

Q9FZ35 Proline-rich protein 12.2e-1633.53Show/hide
Query:  PPKTVRGAGDHDGTAPFPTTLPIYEKPPPSYGEEAPAPLTIAVEGVVSCKTGSKYSPLKGVVARITCV---ALNEKGNEVAPFSFSSFPTDEHGYFLATL
        PP   + +  +    PF    P Y  P   Y  E    +  AV G++ CK G +  P++G  A+I C    +  +  NEV  +   S PTD  GYF   L
Subjt:  PPKTVRGAGDHDGTAPFPTTLPIYEKPPPSYGEEAPAPLTIAVEGVVSCKTGSKYSPLKGVVARITCV---ALNEKGNEVAPFSFSSFPTDEHGYFLATL

Query:  SPSKLKGKAKVTQCKTFLPPSPCEDCKYPTDINNGVTGALFSSFRILTNKKMKLYSVGPFFYTSEPNASP
        +  K      ++ C+  L  SP E CK PT++N G+TG  FS +   ++K +KL++VGPF++T+   A+P
Subjt:  SPSKLKGKAKVTQCKTFLPPSPCEDCKYPTDINNGVTGALFSSFRILTNKKMKLYSVGPFFYTSEPNASP

Q9LT27 Large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic9.3e-8455.85Show/hide
Query:  LFTCLTLCFLKSKGNASFNSNFRFVGCKVPFTENIQATMLKFASLKGVKPAYQSLFEDNIIISDWEDQEGDTEEMGSPWEGAVTYKRNSSVSHVEYCTTL
        L TC TL      G  +F +  R       FTE I+   L   +   +  + +S  E + I  DWEDQE + E+ GSPWEG+V Y+RN+SV+HVEYCTTL
Subjt:  LFTCLTLCFLKSKGNASFNSNFRFVGCKVPFTENIQATMLKFASLKGVKPAYQSLFEDNIIISDWEDQEGDTEEMGSPWEGAVTYKRNSSVSHVEYCTTL

Query:  ERLGFEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISIDVTRKEKKLRLDGIVKTVITLDCYRCCEPAAECVFSNFSLILSEEPIEEPEVINMGIIS
        ERLG  +LSTDVSK RAS MGLRVTK VKDYP GTPVQ+S+DV RK+KKLRLDGIV+TVITL C RC E   E +FSNFSL+L+EEP+EEP+VI++G   
Subjt:  ERLGFEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISIDVTRKEKKLRLDGIVKTVITLDCYRCCEPAAECVFSNFSLILSEEPIEEPEVINMGIIS

Query:  GQDKFMTFDQNSDQDDEELIDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICNPGCKGMCLRCGINLNIGSCNCSKQDVKKNDFGPLGNLKRQMQK
        G DK     ++ D +D+  ID +D+L+FPP  KEIDISK+IRD++HLEIT+ AIC+  CKGMCL+CG NLN   C+C +++ K   +GPLGNL+ QMQ+
Subjt:  GQDKFMTFDQNSDQDDEELIDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICNPGCKGMCLRCGINLNIGSCNCSKQDVKKNDFGPLGNLKRQMQK

Q9LZJ7 Proline-rich protein 34.1e-1534.78Show/hide
Query:  PIYEKPPPSYGEEAPAP------------LTIAVEGVVSCKTGSKYSPLKGVVARITCVALNEKGNEVAPFSFSSFPTDEHGYFLATLSPSKLKGKAKVT
        P Y  PPP Y    P P            +  AV+G++ CK G +  P+ G   +I C      G         S PTD  GYF  +L+  K      + 
Subjt:  PIYEKPPPSYGEEAPAP------------LTIAVEGVVSCKTGSKYSPLKGVVARITCVALNEKGNEVAPFSFSSFPTDEHGYFLATLSPSKLKGKAKVT

Query:  QCKTFLPPSPCEDCKYPTDINNGVTG---ALFSSFRILTNKKMKLYSVGPFFYTSEPNASP
         C+  L  SP E CK PT++N G+TG   AL+  +R   +K ++L+SVGPF+YT  P A+P
Subjt:  QCKTFLPPSPCEDCKYPTDINNGVTG---ALFSSFRILTNKKMKLYSVGPFFYTSEPNASP

Arabidopsis top hitse value%identityAlignment
AT1G54970.1 proline-rich protein 11.6e-1733.53Show/hide
Query:  PPKTVRGAGDHDGTAPFPTTLPIYEKPPPSYGEEAPAPLTIAVEGVVSCKTGSKYSPLKGVVARITCV---ALNEKGNEVAPFSFSSFPTDEHGYFLATL
        PP   + +  +    PF    P Y  P   Y  E    +  AV G++ CK G +  P++G  A+I C    +  +  NEV  +   S PTD  GYF   L
Subjt:  PPKTVRGAGDHDGTAPFPTTLPIYEKPPPSYGEEAPAPLTIAVEGVVSCKTGSKYSPLKGVVARITCV---ALNEKGNEVAPFSFSSFPTDEHGYFLATL

Query:  SPSKLKGKAKVTQCKTFLPPSPCEDCKYPTDINNGVTGALFSSFRILTNKKMKLYSVGPFFYTSEPNASP
        +  K      ++ C+  L  SP E CK PT++N G+TG  FS +   ++K +KL++VGPF++T+   A+P
Subjt:  SPSKLKGKAKVTQCKTFLPPSPCEDCKYPTDINNGVTGALFSSFRILTNKKMKLYSVGPFFYTSEPNASP

AT2G47530.1 Pollen Ole e 1 allergen and extensin family protein2.8e-1932.16Show/hide
Query:  SATPVLLLLLLAVSSAADSYGIPDGEDYAPPKTVRGAGDHDGTAPFPTTLPIYEKPPPSYGEEAPAPLTIAVEGVVSCKTGSKYSPLKGVVARITCVALN
        +AT +LLL ++ V + AD Y  P  + Y P  T         T   P   P   K  P           IA+EG + CK+G K  P++G   ++ C  ++
Subjt:  SATPVLLLLLLAVSSAADSYGIPDGEDYAPPKTVRGAGDHDGTAPFPTTLPIYEKPPPSYGEEAPAPLTIAVEGVVSCKTGSKYSPLKGVVARITCVALN

Query:  EKGNEVAPFSFSSFPTDEHGYFLATLSPSKLKGKAKVTQCKTFLPPSPCEDCKYPTDINNGVTGALFS--SFRILTNKKMKLYSVGPFFYTSEPNASPI
          G  VA  + SS+PTD  GYF         K    ++ CK  L  SP   CK PT++N GVTGA  S  + + L++  + LY++ PF+++S     P+
Subjt:  EKGNEVAPFSFSSFPTDEHGYFLATLSPSKLKGKAKVTQCKTFLPPSPCEDCKYPTDINNGVTGALFS--SFRILTNKKMKLYSVGPFFYTSEPNASPI

AT2G47540.1 Pollen Ole e 1 allergen and extensin family protein3.7e-3555.3Show/hide
Query:  EERLLSAMIGIQGIILYKFGSTIAPLQEAVARITCKTVDEYGYEAKSYSFLSEASDANGYFLATLSPPEVEDKR---ELKECRAFAELSPLHNCESPSDL
        E  LLS+MIG+QG+I  K GS + P+Q AVAR+TC+  DEYGYEA+  + LS+A+DA GYFLATLS  EV+D +   ++KECRAF ELSP   C  P+++
Subjt:  EERLLSAMIGIQGIILYKFGSTIAPLQEAVARITCKTVDEYGYEAKSYSFLSEASDANGYFLATLSPPEVEDKR---ELKECRAFAELSPLHNCESPSDL

Query:  NNGLSGALLHSYEFLPHN-NMKLFSVGPFLFT
        N G+SGA+L +Y  L +   MKLF+VGPF+F+
Subjt:  NNGLSGALLHSYEFLPHN-NMKLFSVGPFLFT

AT3G19810.1 Protein of unknown function (DUF177)6.6e-8555.85Show/hide
Query:  LFTCLTLCFLKSKGNASFNSNFRFVGCKVPFTENIQATMLKFASLKGVKPAYQSLFEDNIIISDWEDQEGDTEEMGSPWEGAVTYKRNSSVSHVEYCTTL
        L TC TL      G  +F +  R       FTE I+   L   +   +  + +S  E + I  DWEDQE + E+ GSPWEG+V Y+RN+SV+HVEYCTTL
Subjt:  LFTCLTLCFLKSKGNASFNSNFRFVGCKVPFTENIQATMLKFASLKGVKPAYQSLFEDNIIISDWEDQEGDTEEMGSPWEGAVTYKRNSSVSHVEYCTTL

Query:  ERLGFEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISIDVTRKEKKLRLDGIVKTVITLDCYRCCEPAAECVFSNFSLILSEEPIEEPEVINMGIIS
        ERLG  +LSTDVSK RAS MGLRVTK VKDYP GTPVQ+S+DV RK+KKLRLDGIV+TVITL C RC E   E +FSNFSL+L+EEP+EEP+VI++G   
Subjt:  ERLGFEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISIDVTRKEKKLRLDGIVKTVITLDCYRCCEPAAECVFSNFSLILSEEPIEEPEVINMGIIS

Query:  GQDKFMTFDQNSDQDDEELIDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICNPGCKGMCLRCGINLNIGSCNCSKQDVKKNDFGPLGNLKRQMQK
        G DK     ++ D +D+  ID +D+L+FPP  KEIDISK+IRD++HLEIT+ AIC+  CKGMCL+CG NLN   C+C +++ K   +GPLGNL+ QMQ+
Subjt:  GQDKFMTFDQNSDQDDEELIDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICNPGCKGMCLRCGINLNIGSCNCSKQDVKKNDFGPLGNLKRQMQK

AT4G02270.1 root hair specific 131.1e-3451.09Show/hide
Query:  YGEEAPAP----LTIAVEGVVSCKTGSKYSPLKGVVARITCVALNEKGNEVAPFSFSSFPTDEHGYFLATLSPSKLKGKAKVTQCKTFLPPSPCEDCKYP
        YG EA       + IAVEG++ CK+G K  P++G  ARI CV ++  GNE+ P S  S  TD  GYF+AT+ PS+L+    VT+CKT+L  SP  DC +P
Subjt:  YGEEAPAP----LTIAVEGVVSCKTGSKYSPLKGVVARITCVALNEKGNEVAPFSFSSFPTDEHGYFLATLSPSKLKGKAKVTQCKTFLPPSPCEDCKYP

Query:  TDINNGVTGALFSSFRILTNKKMKLYSVGPFFYTSEP
        TD+N GV G   S++RIL +K  KLY  GPFFYTSEP
Subjt:  TDINNGVTGALFSSFRILTNKKMKLYSVGPFFYTSEP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTCGTAAGGCAATTCTCTGCAACTCCGGTGCTGCTGCTGCTGCTGCTGGCCGTTTCTTCCGCGGCGGATTCTTACGGCATCCCCGACGGGGAAGATTACGCGCC
ACCCAAGACTGTACGCGGAGCGGGCGATCATGACGGAACGGCGCCGTTTCCAACCACCCTGCCCATCTACGAGAAACCGCCCCCGTCGTACGGCGAGGAAGCGCCGGCGC
CGCTCACCATCGCTGTTGAAGGAGTTGTTTCCTGTAAAACTGGCTCCAAATATTCTCCACTCAAAGGTGTTGTAGCGAGAATCACATGTGTAGCTTTGAACGAAAAAGGT
AATGAAGTGGCTCCTTTCTCATTCTCCAGTTTCCCAACCGACGAGCATGGCTATTTCTTGGCCACATTGTCACCTTCCAAGCTCAAGGGCAAGGCTAAGGTGACCCAATG
CAAGACCTTCCTTCCACCTTCGCCATGCGAGGACTGCAAATACCCGACCGACATTAACAACGGCGTCACGGGTGCTCTGTTTAGTTCTTTTCGCATTCTCACGAACAAGA
AGATGAAGTTGTACTCTGTTGGACCTTTCTTCTACACCTCAGAACCAAACGCGTCCCCTATACCCGATGCTGGGGATAACAATGGTGGTGGGTATTCTGGTCTTTTGACA
CCCAAATTGGATAAAGAAGAAAGGCTTCTCTCTGCCATGATTGGTATCCAAGGGATTATTCTTTACAAATTTGGCTCAACAATTGCCCCTCTTCAAGAAGCTGTGGCAAG
AATAACATGCAAAACAGTGGATGAGTATGGGTATGAGGCAAAATCTTACTCCTTTCTAAGTGAAGCAAGTGATGCAAATGGCTACTTTTTGGCAACACTCTCTCCCCCAG
AGGTAGAAGATAAGAGGGAGCTGAAAGAGTGTAGGGCTTTTGCAGAGCTCTCTCCATTACACAACTGTGAATCTCCTTCTGACCTCAACAATGGACTCTCTGGTGCTCTT
CTCCATTCCTATGAATTTTTACCTCACAACAACATGAAGCTCTTCTCCGTTGGCCCTTTCCTTTTCACATGCCTGACGCTTTGCTTCTTGAAATCCAAAGGGAATGCTTC
TTTCAATTCTAATTTCCGCTTTGTTGGTTGTAAAGTTCCATTTACGGAAAATATCCAGGCAACCATGCTAAAATTTGCTTCCCTAAAGGGTGTGAAACCTGCTTATCAGT
CCCTTTTTGAAGACAACATTATAATTTCTGATTGGGAGGATCAAGAAGGGGACACTGAAGAGATGGGGTCACCTTGGGAAGGAGCAGTTACTTATAAGAGGAACTCTTCA
GTTTCTCATGTGGAGTACTGCACAACATTAGAGAGGCTTGGATTTGAAAAGCTTTCGACCGATGTCTCGAAATCTAGAGCATCGAAGATGGGTCTGCGGGTAACAAAGGC
TGTGAAAGATTATCCATTCGGAACGCCTGTTCAAATCTCTATTGATGTTACAAGGAAAGAAAAAAAGTTGAGGCTTGATGGGATTGTTAAAACTGTCATCACTCTTGATT
GCTATAGGTGTTGTGAACCTGCTGCTGAATGTGTTTTCTCAAATTTTTCACTTATACTGAGCGAGGAACCGATTGAGGAACCTGAGGTCATAAACATGGGAATCATCAGT
GGGCAGGATAAGTTCATGACATTCGATCAAAATAGTGATCAAGATGATGAAGAGTTGATTGATTTGGATGACCAACTCTACTTTCCTCCTGTAGAGAAAGAAATAGATAT
ATCAAAGAACATAAGAGACATTTTGCATCTGGAAATCACAATGAATGCGATATGCAACCCGGGATGCAAAGGTATGTGTCTGAGATGTGGTATAAATTTGAACATTGGAA
GTTGTAACTGTAGTAAACAGGATGTAAAGAAGAATGATTTTGGTCCTCTTGGAAATTTGAAAAGGCAAATGCAGAAAAATTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCTCGTAAGGCAATTCTCTGCAACTCCGGTGCTGCTGCTGCTGCTGCTGGCCGTTTCTTCCGCGGCGGATTCTTACGGCATCCCCGACGGGGAAGATTACGCGCC
ACCCAAGACTGTACGCGGAGCGGGCGATCATGACGGAACGGCGCCGTTTCCAACCACCCTGCCCATCTACGAGAAACCGCCCCCGTCGTACGGCGAGGAAGCGCCGGCGC
CGCTCACCATCGCTGTTGAAGGAGTTGTTTCCTGTAAAACTGGCTCCAAATATTCTCCACTCAAAGGTGTTGTAGCGAGAATCACATGTGTAGCTTTGAACGAAAAAGGT
AATGAAGTGGCTCCTTTCTCATTCTCCAGTTTCCCAACCGACGAGCATGGCTATTTCTTGGCCACATTGTCACCTTCCAAGCTCAAGGGCAAGGCTAAGGTGACCCAATG
CAAGACCTTCCTTCCACCTTCGCCATGCGAGGACTGCAAATACCCGACCGACATTAACAACGGCGTCACGGGTGCTCTGTTTAGTTCTTTTCGCATTCTCACGAACAAGA
AGATGAAGTTGTACTCTGTTGGACCTTTCTTCTACACCTCAGAACCAAACGCGTCCCCTATACCCGATGCTGGGGATAACAATGGTGGTGGGTATTCTGGTCTTTTGACA
CCCAAATTGGATAAAGAAGAAAGGCTTCTCTCTGCCATGATTGGTATCCAAGGGATTATTCTTTACAAATTTGGCTCAACAATTGCCCCTCTTCAAGAAGCTGTGGCAAG
AATAACATGCAAAACAGTGGATGAGTATGGGTATGAGGCAAAATCTTACTCCTTTCTAAGTGAAGCAAGTGATGCAAATGGCTACTTTTTGGCAACACTCTCTCCCCCAG
AGGTAGAAGATAAGAGGGAGCTGAAAGAGTGTAGGGCTTTTGCAGAGCTCTCTCCATTACACAACTGTGAATCTCCTTCTGACCTCAACAATGGACTCTCTGGTGCTCTT
CTCCATTCCTATGAATTTTTACCTCACAACAACATGAAGCTCTTCTCCGTTGGCCCTTTCCTTTTCACATGCCTGACGCTTTGCTTCTTGAAATCCAAAGGGAATGCTTC
TTTCAATTCTAATTTCCGCTTTGTTGGTTGTAAAGTTCCATTTACGGAAAATATCCAGGCAACCATGCTAAAATTTGCTTCCCTAAAGGGTGTGAAACCTGCTTATCAGT
CCCTTTTTGAAGACAACATTATAATTTCTGATTGGGAGGATCAAGAAGGGGACACTGAAGAGATGGGGTCACCTTGGGAAGGAGCAGTTACTTATAAGAGGAACTCTTCA
GTTTCTCATGTGGAGTACTGCACAACATTAGAGAGGCTTGGATTTGAAAAGCTTTCGACCGATGTCTCGAAATCTAGAGCATCGAAGATGGGTCTGCGGGTAACAAAGGC
TGTGAAAGATTATCCATTCGGAACGCCTGTTCAAATCTCTATTGATGTTACAAGGAAAGAAAAAAAGTTGAGGCTTGATGGGATTGTTAAAACTGTCATCACTCTTGATT
GCTATAGGTGTTGTGAACCTGCTGCTGAATGTGTTTTCTCAAATTTTTCACTTATACTGAGCGAGGAACCGATTGAGGAACCTGAGGTCATAAACATGGGAATCATCAGT
GGGCAGGATAAGTTCATGACATTCGATCAAAATAGTGATCAAGATGATGAAGAGTTGATTGATTTGGATGACCAACTCTACTTTCCTCCTGTAGAGAAAGAAATAGATAT
ATCAAAGAACATAAGAGACATTTTGCATCTGGAAATCACAATGAATGCGATATGCAACCCGGGATGCAAAGGTATGTGTCTGAGATGTGGTATAAATTTGAACATTGGAA
GTTGTAACTGTAGTAAACAGGATGTAAAGAAGAATGATTTTGGTCCTCTTGGAAATTTGAAAAGGCAAATGCAGAAAAATTCATAA
Protein sequenceShow/hide protein sequence
MALVRQFSATPVLLLLLLAVSSAADSYGIPDGEDYAPPKTVRGAGDHDGTAPFPTTLPIYEKPPPSYGEEAPAPLTIAVEGVVSCKTGSKYSPLKGVVARITCVALNEKG
NEVAPFSFSSFPTDEHGYFLATLSPSKLKGKAKVTQCKTFLPPSPCEDCKYPTDINNGVTGALFSSFRILTNKKMKLYSVGPFFYTSEPNASPIPDAGDNNGGGYSGLLT
PKLDKEERLLSAMIGIQGIILYKFGSTIAPLQEAVARITCKTVDEYGYEAKSYSFLSEASDANGYFLATLSPPEVEDKRELKECRAFAELSPLHNCESPSDLNNGLSGAL
LHSYEFLPHNNMKLFSVGPFLFTCLTLCFLKSKGNASFNSNFRFVGCKVPFTENIQATMLKFASLKGVKPAYQSLFEDNIIISDWEDQEGDTEEMGSPWEGAVTYKRNSS
VSHVEYCTTLERLGFEKLSTDVSKSRASKMGLRVTKAVKDYPFGTPVQISIDVTRKEKKLRLDGIVKTVITLDCYRCCEPAAECVFSNFSLILSEEPIEEPEVINMGIIS
GQDKFMTFDQNSDQDDEELIDLDDQLYFPPVEKEIDISKNIRDILHLEITMNAICNPGCKGMCLRCGINLNIGSCNCSKQDVKKNDFGPLGNLKRQMQKNS