; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc09g07560 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g07560
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionclassical arabinogalactan protein 26
Genome locationchr9:6001698..6002057
RNA-Seq ExpressionMoc09g07560
SyntenyMoc09g07560
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039346 - Classical arabinogalactan protein 25/26


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575865.1 hypothetical protein SDJN03_26504, partial [Cucurbita argyrosperma subsp. sororia]3.8e-3372.8Show/hide
Query:  MAYSASL---ALASYPNYFPPSISSISAAPEFSPAPAP----DISPLFPTPGGAALPPADSSFPTIPSSPSPPNPDFSVSAPAPELPLPPSQSLPISAAA
        MAY+AS+   + ASYPN+FPP ISSISAAPEFSP+P+P    DISPLFPTPGGA LPP  SS PTIPSSPSPPNPDF  +APAPE+PLPPSQSLP SAAA
Subjt:  MAYSASL---ALASYPNYFPPSISSISAAPEFSPAPAP----DISPLFPTPGGAALPPADSSFPTIPSSPSPPNPDFSVSAPAPELPLPPSQSLPISAAA

Query:  ALNSGGWYRPVLVILTAAFAAEVGR
         LNSGGW   + V LTAA  AEV R
Subjt:  ALNSGGWYRPVLVILTAAFAAEVGR
XP_022953817.1 classical arabinogalactan protein 26 [Cucurbita moschata]8.6e-3372Show/hide
Query:  MAYSASL---ALASYPNYFPPSISSISAAPEFSPAPAP----DISPLFPTPGGAALPPADSSFPTIPSSPSPPNPDFSVSAPAPELPLPPSQSLPISAAA
        MAY+AS+   + ASYPN+FPP ISSISAAPEFSP+P+P    DI+PLFPTPGGA LPP  SS PTIPSSPSPPNPDF  +APAPE+PLPPSQSLP SAAA
Subjt:  MAYSASL---ALASYPNYFPPSISSISAAPEFSPAPAP----DISPLFPTPGGAALPPADSSFPTIPSSPSPPNPDFSVSAPAPELPLPPSQSLPISAAA

Query:  ALNSGGWYRPVLVILTAAFAAEVGR
         LNSGGW   + V LTAA  AEV R
Subjt:  ALNSGGWYRPVLVILTAAFAAEVGR
XP_022991733.1 classical arabinogalactan protein 26 [Cucurbita maxima]4.2e-3271.2Show/hide
Query:  MAYSASL---ALASYPNYFPPSISSISAAPEFSPAPAP----DISPLFPTPGGAALPPADSSFPTIPSSPSPPNPDFSVSAPAPELPLPPSQSLPISAAA
        MAY+AS+   + ASYPN+FPP ISSISAAPEFSP+P+P    DISPLFPTPGGA LPP  SS PTIPSSPSPPNPDF  + PAPE+PLPPSQSLP SAAA
Subjt:  MAYSASL---ALASYPNYFPPSISSISAAPEFSPAPAP----DISPLFPTPGGAALPPADSSFPTIPSSPSPPNPDFSVSAPAPELPLPPSQSLPISAAA

Query:  ALNSGGWYRPVLVILTAAFAAEVGR
         LNSGGW   + V LTAA   EV R
Subjt:  ALNSGGWYRPVLVILTAAFAAEVGR
XP_023548939.1 classical arabinogalactan protein 26-like [Cucurbita pepo subsp. pepo]1.1e-3272Show/hide
Query:  MAYSASL---ALASYPNYFPPSISSISAAPEFSPAPAP----DISPLFPTPGGAALPPADSSFPTIPSSPSPPNPDFSVSAPAPELPLPPSQSLPISAAA
        MAY+AS+   + ASYPN+FPP ISSISAAPEFSP+P+P    DISPLFPTPGGA LPP  SS PTIPSSPSPPNPDF  +APAPE+PLPPSQSLP SA A
Subjt:  MAYSASL---ALASYPNYFPPSISSISAAPEFSPAPAP----DISPLFPTPGGAALPPADSSFPTIPSSPSPPNPDFSVSAPAPELPLPPSQSLPISAAA

Query:  ALNSGGWYRPVLVILTAAFAAEVGR
         LNSGGW   + V LTAA  AEV R
Subjt:  ALNSGGWYRPVLVILTAAFAAEVGR
XP_038876736.1 classical arabinogalactan protein 26-like [Benincasa hispida]6.8e-3069.29Show/hide
Query:  MAYSASL---ALASYPNYFPPSISSISAAPEFSPAPAP------DISPLFPTPGGAALPPADSSFPTIPSSPSPPNPDFSVSAPAPELPLPPSQSLPISA
        MAY+AS+   +LASYPNY P  ISSISAAPEFSP P+P      DISPLFPTPGGA LPP  SS PTIPSSPSPPNPDF  +APAPE+ LPPSQSLP SA
Subjt:  MAYSASL---ALASYPNYFPPSISSISAAPEFSPAPAP------DISPLFPTPGGAALPPADSSFPTIPSSPSPPNPDFSVSAPAPELPLPPSQSLPISA

Query:  AAALNSGGWYRPVLVILTAAFAAEVGR
        A +LN  GW  PVLV LT A A E+ R
Subjt:  AAALNSGGWYRPVLVILTAAFAAEVGR
TrEMBL top hitse value%identityAlignment
A0A0A0K510 Uncharacterized protein1.4e-2870.16Show/hide
Query:  MAYSASL---ALASYPNYFPPS-ISSISAAPEFSPAPAP--DISPLFPTPGGAALPPADSSFPTIPSSPSPPNPDFSVSAPAPELPLPPSQSLPISAAAA
        MAY+AS+   + ASYPN FP   ISSISAAPEFSP+PAP  DISPLFPTPG A LPP  SS PTIPSSPSPPNPDF  +APAPE+PL PSQSLP S AAA
Subjt:  MAYSASL---ALASYPNYFPPS-ISSISAAPEFSPAPAP--DISPLFPTPGGAALPPADSSFPTIPSSPSPPNPDFSVSAPAPELPLPPSQSLPISAAAA

Query:  LNSGGWYRPVLVILTAAFAAEVGR
        LNSGGW   V V LT    AE+ R
Subjt:  LNSGGWYRPVLVILTAAFAAEVGR
A0A1S3BRG9 classical arabinogalactan protein 265.8e-2767.72Show/hide
Query:  MAYSAS---LALASYPNYFPP----SISSISAAPEFSPAPAP--DISPLFPTPGGAALPPADSSFPTIPSSPSPPNPDFSVSAPAPELPLPPSQSLPISA
        MAY+AS    A ASYPNYFP       SSISAAPEFSPAPAP  DISPLFPTPG A LPP  SS PTIPSSPSPPNPDF   APAPE+PL P+ S+P SA
Subjt:  MAYSAS---LALASYPNYFPP----SISSISAAPEFSPAPAP--DISPLFPTPGGAALPPADSSFPTIPSSPSPPNPDFSVSAPAPELPLPPSQSLPISA

Query:  AAALNSGGWYRPVLVILTAAFAAEVGR
        AAALNS GW   V + L  A AAE+ R
Subjt:  AAALNSGGWYRPVLVILTAAFAAEVGR
A0A5A7UQZ3 Classical arabinogalactan protein 265.8e-2767.72Show/hide
Query:  MAYSAS---LALASYPNYFPP----SISSISAAPEFSPAPAP--DISPLFPTPGGAALPPADSSFPTIPSSPSPPNPDFSVSAPAPELPLPPSQSLPISA
        MAY+AS    A ASYPNYFP       SSISAAPEFSPAPAP  DISPLFPTPG A LPP  SS PTIPSSPSPPNPDF   APAPE+PL P+ S+P SA
Subjt:  MAYSAS---LALASYPNYFPP----SISSISAAPEFSPAPAP--DISPLFPTPGGAALPPADSSFPTIPSSPSPPNPDFSVSAPAPELPLPPSQSLPISA

Query:  AAALNSGGWYRPVLVILTAAFAAEVGR
        AAALNS GW   V + L  A AAE+ R
Subjt:  AAALNSGGWYRPVLVILTAAFAAEVGR
A0A6J1GPB2 classical arabinogalactan protein 264.1e-3372Show/hide
Query:  MAYSASL---ALASYPNYFPPSISSISAAPEFSPAPAP----DISPLFPTPGGAALPPADSSFPTIPSSPSPPNPDFSVSAPAPELPLPPSQSLPISAAA
        MAY+AS+   + ASYPN+FPP ISSISAAPEFSP+P+P    DI+PLFPTPGGA LPP  SS PTIPSSPSPPNPDF  +APAPE+PLPPSQSLP SAAA
Subjt:  MAYSASL---ALASYPNYFPPSISSISAAPEFSPAPAP----DISPLFPTPGGAALPPADSSFPTIPSSPSPPNPDFSVSAPAPELPLPPSQSLPISAAA

Query:  ALNSGGWYRPVLVILTAAFAAEVGR
         LNSGGW   + V LTAA  AEV R
Subjt:  ALNSGGWYRPVLVILTAAFAAEVGR
A0A6J1JX46 classical arabinogalactan protein 262.1e-3271.2Show/hide
Query:  MAYSASL---ALASYPNYFPPSISSISAAPEFSPAPAP----DISPLFPTPGGAALPPADSSFPTIPSSPSPPNPDFSVSAPAPELPLPPSQSLPISAAA
        MAY+AS+   + ASYPN+FPP ISSISAAPEFSP+P+P    DISPLFPTPGGA LPP  SS PTIPSSPSPPNPDF  + PAPE+PLPPSQSLP SAAA
Subjt:  MAYSASL---ALASYPNYFPPSISSISAAPEFSPAPAP----DISPLFPTPGGAALPPADSSFPTIPSSPSPPNPDFSVSAPAPELPLPPSQSLPISAAA

Query:  ALNSGGWYRPVLVILTAAFAAEVGR
         LNSGGW   + V LTAA   EV R
Subjt:  ALNSGGWYRPVLVILTAAFAAEVGR
SwissProt top hitse value%identityAlignment
Q94F57 Classical arabinogalactan protein 261.6e-0540.74Show/hide
Query:  LASYPNYFPPSISSISAAPEFSPAPAPDISPLFPTPGGAALPPADSS---FPTIPSSPSPPNPDFSVSAPAPELPLPPSQSLPISAAAALNSGGWYRPVL
        +++ P++ P + SS SA+   +PA +PD SPLFPTPG + + P+ S     PTIPSS SPPNPD     P  E+  P    LP S++  L S      +L
Subjt:  LASYPNYFPPSISSISAAPEFSPAPAPDISPLFPTPGGAALPPADSS---FPTIPSSPSPPNPDFSVSAPAPELPLPPSQSLPISAAAALNSGGWYRPVL

Query:  VILTAAFA
        V+L    A
Subjt:  VILTAAFA
Arabidopsis top hitse value%identityAlignment
AT2G47930.1 arabinogalactan protein 261.1e-0640.74Show/hide
Query:  LASYPNYFPPSISSISAAPEFSPAPAPDISPLFPTPGGAALPPADSS---FPTIPSSPSPPNPDFSVSAPAPELPLPPSQSLPISAAAALNSGGWYRPVL
        +++ P++ P + SS SA+   +PA +PD SPLFPTPG + + P+ S     PTIPSS SPPNPD     P  E+  P    LP S++  L S      +L
Subjt:  LASYPNYFPPSISSISAAPEFSPAPAPDISPLFPTPGGAALPPADSS---FPTIPSSPSPPNPDFSVSAPAPELPLPPSQSLPISAAAALNSGGWYRPVL

Query:  VILTAAFA
        V+L    A
Subjt:  VILTAAFA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTACTCGGCTTCTCTCGCTCTCGCTTCTTATCCAAATTACTTCCCTCCTTCAATTTCTTCCATTTCCGCCGCGCCGGAGTTTTCGCCGGCGCCGGCGCCG
GACATTTCTCCGCTGTTTCCGACCCCCGGAGGCGCCGCACTTCCGCCGGCCGATTCCTCGTTTCCGACCATTCCTTCGAGTCCCAGCCCGCCCAACCCGGATTTC
TCGGTCTCGGCTCCGGCGCCGGAGCTGCCTCTTCCGCCGTCTCAGTCGTTGCCCATTTCCGCTGCTGCTGCTCTGAACTCCGGCGGTTGGTACCGGCCGGTTTTG
GTGATTCTTACGGCGGCTTTCGCGGCGGAGGTCGGTCGCCGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTACTCGGCTTCTCTCGCTCTCGCTTCTTATCCAAATTACTTCCCTCCTTCAATTTCTTCCATTTCCGCCGCGCCGGAGTTTTCGCCGGCGCCGGCGCCG
GACATTTCTCCGCTGTTTCCGACCCCCGGAGGCGCCGCACTTCCGCCGGCCGATTCCTCGTTTCCGACCATTCCTTCGAGTCCCAGCCCGCCCAACCCGGATTTC
TCGGTCTCGGCTCCGGCGCCGGAGCTGCCTCTTCCGCCGTCTCAGTCGTTGCCCATTTCCGCTGCTGCTGCTCTGAACTCCGGCGGTTGGTACCGGCCGGTTTTG
GTGATTCTTACGGCGGCTTTCGCGGCGGAGGTCGGTCGCCGGTGA
Protein sequenceShow/hide protein sequence
MAYSASLALASYPNYFPPSISSISAAPEFSPAPAPDISPLFPTPGGAALPPADSSFPTIPSSPSPPNPDFSVSAPAPELPLPPSQSLPISAAAALNSGGWYRPVL
VILTAAFAAEVGRR