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Moc09g07990 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g07990
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionsyntaxin-43-like
Genome locationchr9:6384668..6385827
RNA-Seq ExpressionMoc09g07990
SyntenyMoc09g07990
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0006906 - vesicle fusion (biological process)
GO:0048278 - vesicle docking (biological process)
GO:0012505 - endomembrane system (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031201 - SNARE complex (cellular component)
GO:0000149 - SNARE binding (molecular function)
GO:0005484 - SNAP receptor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599198.1 Syntaxin-43, partial [Cucurbita argyrosperma subsp. sororia]8.5e-3375.21Show/hide
Query:  MASRNQTLLFRK---SLRSVMAPTSSSPVSASPPTSSSAGGSVIELVSSSLLNPNRTYAPLSTEDPANSRSISSAHTMGLPLAWVDVSKEIAANVQRVRS
        MASRN+TL+FRK   +LRSV  PT SSP SASP TSS  GG VIELVSSSLL+PNR+YAPLSTEDP NS     A T+GLP AWVDVS+EIAANVQR R 
Subjt:  MASRNQTLLFRK---SLRSVMAPTSSSPVSASPPTSSSAGGSVIELVSSSLLNPNRTYAPLSTEDPANSRSISSAHTMGLPLAWVDVSKEIAANVQRVRS

Query:  KMIELAKAHAKALMPSF
        KM+ELAKAHAKALMPSF
Subjt:  KMIELAKAHAKALMPSF

KAG7030133.1 Syntaxin-43, partial [Cucurbita argyrosperma subsp. argyrosperma]8.5e-3375.21Show/hide
Query:  MASRNQTLLFRK---SLRSVMAPTSSSPVSASPPTSSSAGGSVIELVSSSLLNPNRTYAPLSTEDPANSRSISSAHTMGLPLAWVDVSKEIAANVQRVRS
        MASRN+TL+FRK   +LRSV  PT SSP SASP TSS  GG VIELVSSSLL+PNR+YAPLSTEDP NS     A T+GLP AWVDVS+EIAANVQR R 
Subjt:  MASRNQTLLFRK---SLRSVMAPTSSSPVSASPPTSSSAGGSVIELVSSSLLNPNRTYAPLSTEDPANSRSISSAHTMGLPLAWVDVSKEIAANVQRVRS

Query:  KMIELAKAHAKALMPSF
        KM+ELAKAHAKALMPSF
Subjt:  KMIELAKAHAKALMPSF

XP_022156434.1 syntaxin-41-like [Momordica charantia]9.7e-3781.2Show/hide
Query:  MASRNQTLLFRK---SLRSVMAPTSSSPVSASPPTSSSAGGSVIELVSSSLLNPNRTYAPLSTEDPANSRSISSAHTMGLPLAWVDVSKEIAANVQRVRS
        MASRN+TLLFRK   +LRSV APTSSSPVSASP TSS AGG VIELVSSSLL+PNRTYAPLSTEDP NS     AHT+GLP AWVDVS+EIAANVQR R+
Subjt:  MASRNQTLLFRK---SLRSVMAPTSSSPVSASPPTSSSAGGSVIELVSSSLLNPNRTYAPLSTEDPANSRSISSAHTMGLPLAWVDVSKEIAANVQRVRS

Query:  KMIELAKAHAKALMPSF
        KM ELAKAHAKALMPSF
Subjt:  KMIELAKAHAKALMPSF

XP_022965836.1 syntaxin-41-like [Cucurbita maxima]8.5e-3375.21Show/hide
Query:  MASRNQTLLFRK---SLRSVMAPTSSSPVSASPPTSSSAGGSVIELVSSSLLNPNRTYAPLSTEDPANSRSISSAHTMGLPLAWVDVSKEIAANVQRVRS
        MASRN+TL+FRK   +LRSV APTSSSP   SP TSSSAGG VIELVSSSLL+PNR+YAPLSTEDP NS     A T+GLP +WVDVS+EIAANVQR R 
Subjt:  MASRNQTLLFRK---SLRSVMAPTSSSPVSASPPTSSSAGGSVIELVSSSLLNPNRTYAPLSTEDPANSRSISSAHTMGLPLAWVDVSKEIAANVQRVRS

Query:  KMIELAKAHAKALMPSF
        KM+ELAKAH KALMPSF
Subjt:  KMIELAKAHAKALMPSF

XP_023522691.1 syntaxin-41-like, partial [Cucurbita pepo subsp. pepo]8.5e-3375.21Show/hide
Query:  MASRNQTLLFRK---SLRSVMAPTSSSPVSASPPTSSSAGGSVIELVSSSLLNPNRTYAPLSTEDPANSRSISSAHTMGLPLAWVDVSKEIAANVQRVRS
        MASRN+TL+FRK   +LRSV  PT SSP SASP TSS  GG VIELVSSSLL+PNR+YAPLSTEDP NS     A T+GLP AWVDVS+EIAANVQR R 
Subjt:  MASRNQTLLFRK---SLRSVMAPTSSSPVSASPPTSSSAGGSVIELVSSSLLNPNRTYAPLSTEDPANSRSISSAHTMGLPLAWVDVSKEIAANVQRVRS

Query:  KMIELAKAHAKALMPSF
        KM+ELAKAHAKALMPSF
Subjt:  KMIELAKAHAKALMPSF

TrEMBL top hitse value%identityAlignment
A0A5A7U3M4 Syntaxin-435.4e-3376.07Show/hide
Query:  MASRNQTLLFRK---SLRSVMAPTSSSPVSASPPTSSSAGGSVIELVSSSLLNPNRTYAPLSTEDPANSRSISSAHTMGLPLAWVDVSKEIAANVQRVRS
        MASRN+TLLF+K   +LRSV  PTSSS  SASP TSS+AGG VIELVSSSLL+PNR+YAPLSTEDP NS     A T+GLP AWVDVS+EIAANVQR R 
Subjt:  MASRNQTLLFRK---SLRSVMAPTSSSPVSASPPTSSSAGGSVIELVSSSLLNPNRTYAPLSTEDPANSRSISSAHTMGLPLAWVDVSKEIAANVQRVRS

Query:  KMIELAKAHAKALMPSF
        KM+ELAKAHAKALMPSF
Subjt:  KMIELAKAHAKALMPSF

A0A6J1DTG3 syntaxin-41-like4.7e-3781.2Show/hide
Query:  MASRNQTLLFRK---SLRSVMAPTSSSPVSASPPTSSSAGGSVIELVSSSLLNPNRTYAPLSTEDPANSRSISSAHTMGLPLAWVDVSKEIAANVQRVRS
        MASRN+TLLFRK   +LRSV APTSSSPVSASP TSS AGG VIELVSSSLL+PNRTYAPLSTEDP NS     AHT+GLP AWVDVS+EIAANVQR R+
Subjt:  MASRNQTLLFRK---SLRSVMAPTSSSPVSASPPTSSSAGGSVIELVSSSLLNPNRTYAPLSTEDPANSRSISSAHTMGLPLAWVDVSKEIAANVQRVRS

Query:  KMIELAKAHAKALMPSF
        KM ELAKAHAKALMPSF
Subjt:  KMIELAKAHAKALMPSF

A0A6J1G576 syntaxin-43-like4.1e-3375.21Show/hide
Query:  MASRNQTLLFRK---SLRSVMAPTSSSPVSASPPTSSSAGGSVIELVSSSLLNPNRTYAPLSTEDPANSRSISSAHTMGLPLAWVDVSKEIAANVQRVRS
        MASRN+TL+FRK   +LRSV  PT SSP SASP TSS  GG VIELVSSSLL+PNR+YAPLSTEDP NS     A T+GLP AWVDVS+EIAANVQR R 
Subjt:  MASRNQTLLFRK---SLRSVMAPTSSSPVSASPPTSSSAGGSVIELVSSSLLNPNRTYAPLSTEDPANSRSISSAHTMGLPLAWVDVSKEIAANVQRVRS

Query:  KMIELAKAHAKALMPSF
        KM+ELAKAHAKALMPSF
Subjt:  KMIELAKAHAKALMPSF

A0A6J1HMS0 syntaxin-41-like4.1e-3375.21Show/hide
Query:  MASRNQTLLFRK---SLRSVMAPTSSSPVSASPPTSSSAGGSVIELVSSSLLNPNRTYAPLSTEDPANSRSISSAHTMGLPLAWVDVSKEIAANVQRVRS
        MASRN+TL+FRK   +LRSV APTSSSP   SP TSSSAGG VIELVSSSLL+PNR+YAPLSTEDP NS     A T+GLP +WVDVS+EIAANVQR R 
Subjt:  MASRNQTLLFRK---SLRSVMAPTSSSPVSASPPTSSSAGGSVIELVSSSLLNPNRTYAPLSTEDPANSRSISSAHTMGLPLAWVDVSKEIAANVQRVRS

Query:  KMIELAKAHAKALMPSF
        KM+ELAKAH KALMPSF
Subjt:  KMIELAKAHAKALMPSF

A0A6J1KJM9 syntaxin-43-like4.1e-3375.21Show/hide
Query:  MASRNQTLLFRK---SLRSVMAPTSSSPVSASPPTSSSAGGSVIELVSSSLLNPNRTYAPLSTEDPANSRSISSAHTMGLPLAWVDVSKEIAANVQRVRS
        MASRN+TL+FRK   +LRSV  PT SSP SASP TSS  GG VIELVSSSLL+PNR+YAPLSTEDP NS     A T+GLP AWVDVS+EIAANVQR R 
Subjt:  MASRNQTLLFRK---SLRSVMAPTSSSPVSASPPTSSSAGGSVIELVSSSLLNPNRTYAPLSTEDPANSRSISSAHTMGLPLAWVDVSKEIAANVQRVRS

Query:  KMIELAKAHAKALMPSF
        KM+ELAKAHAKALMPSF
Subjt:  KMIELAKAHAKALMPSF

SwissProt top hitse value%identityAlignment
O65359 Syntaxin-411.1e-2764.1Show/hide
Query:  MASRNQTLLFRK---SLRSVMAPTSSSPVSASPPTSSSAGGSVIELVSSSLLNPNRTYAPLSTEDPANSRSISSAHTMGLPLAWVDVSKEIAANVQRVRS
        MA+RN+TLLFRK   SLRSV AP SSS ++    T S   G VIE+ S+SLLNPNR+YAP+STEDP  S     A T+GLP AWVDVS+EI+ N+QR R+
Subjt:  MASRNQTLLFRK---SLRSVMAPTSSSPVSASPPTSSSAGGSVIELVSSSLLNPNRTYAPLSTEDPANSRSISSAHTMGLPLAWVDVSKEIAANVQRVRS

Query:  KMIELAKAHAKALMPSF
        KM EL KAHAKALMPSF
Subjt:  KMIELAKAHAKALMPSF

Q9SUJ1 Syntaxin-436.8e-2559.84Show/hide
Query:  MASRNQTLLFRK---SLRSVMAPTSSSPVSASPPTSSSAG-----GSVIELVSSSLLNPNRTYAPLSTEDPANSRSISSAHTMGLPLAWVDVSKEIAANV
        MA+RN+TLLFRK   SLRSV AP  SS  S     +S  G     G VIE+ S+SLLNPNR+YAP+STEDP NS       T+GLP  WVDVS+EI+  +
Subjt:  MASRNQTLLFRK---SLRSVMAPTSSSPVSASPPTSSSAG-----GSVIELVSSSLLNPNRTYAPLSTEDPANSRSISSAHTMGLPLAWVDVSKEIAANV

Query:  QRVRSKMIELAKAHAKALMPSF
        QR R+KM EL KAHAKALMPSF
Subjt:  QRVRSKMIELAKAHAKALMPSF

Q9SWH4 Syntaxin-423.0e-1750.85Show/hide
Query:  MASRNQTLLFRK---SLRSVMAPTSSSPVSASPPTSSSAGGSVIELVSSSLLNPNR-TYAPLSTEDPANSRSISSAHTMGLPLAWVDVSKEIAANVQRVR
        MA+RN+T ++RK   + +S  AP S S        S S GG VIE+VS S    N  +YAPL++ DP  S   S A T+G+P AWVD S+EI  N+Q+VR
Subjt:  MASRNQTLLFRK---SLRSVMAPTSSSPVSASPPTSSSAGGSVIELVSSSLLNPNR-TYAPLSTEDPANSRSISSAHTMGLPLAWVDVSKEIAANVQRVR

Query:  SKMIELAKAHAKALMPSF
         KM ELAKAH+KALMP+F
Subjt:  SKMIELAKAHAKALMPSF

Arabidopsis top hitse value%identityAlignment
AT3G05710.1 syntaxin of plants 439.7e-2760.66Show/hide
Query:  MASRNQTLLFRK---SLRSVMAPTSSSPVSASPPTSSSAG-----GSVIELVSSSLLNPNRTYAPLSTEDPANSRSISSAHTMGLPLAWVDVSKEIAANV
        MA+RN+TLLFRK   SLRSV AP  SS  S     +S  G     G VIE+ S+SLLNPNR+YAP+STEDP NSR      T+GLP  WVDVS+EI+  +
Subjt:  MASRNQTLLFRK---SLRSVMAPTSSSPVSASPPTSSSAG-----GSVIELVSSSLLNPNRTYAPLSTEDPANSRSISSAHTMGLPLAWVDVSKEIAANV

Query:  QRVRSKMIELAKAHAKALMPSF
        QR R+KM EL KAHAKALMPSF
Subjt:  QRVRSKMIELAKAHAKALMPSF

AT3G05710.2 syntaxin of plants 434.8e-2659.84Show/hide
Query:  MASRNQTLLFRK---SLRSVMAPTSSSPVSASPPTSSSAG-----GSVIELVSSSLLNPNRTYAPLSTEDPANSRSISSAHTMGLPLAWVDVSKEIAANV
        MA+RN+TLLFRK   SLRSV AP  SS  S     +S  G     G VIE+ S+SLLNPNR+YAP+STEDP NS       T+GLP  WVDVS+EI+  +
Subjt:  MASRNQTLLFRK---SLRSVMAPTSSSPVSASPPTSSSAG-----GSVIELVSSSLLNPNRTYAPLSTEDPANSRSISSAHTMGLPLAWVDVSKEIAANV

Query:  QRVRSKMIELAKAHAKALMPSF
        QR R+KM EL KAHAKALMPSF
Subjt:  QRVRSKMIELAKAHAKALMPSF

AT4G02195.1 syntaxin of plants 422.2e-1850.85Show/hide
Query:  MASRNQTLLFRK---SLRSVMAPTSSSPVSASPPTSSSAGGSVIELVSSSLLNPNR-TYAPLSTEDPANSRSISSAHTMGLPLAWVDVSKEIAANVQRVR
        MA+RN+T ++RK   + +S  AP S S        S S GG VIE+VS S    N  +YAPL++ DP  S   S A T+G+P AWVD S+EI  N+Q+VR
Subjt:  MASRNQTLLFRK---SLRSVMAPTSSSPVSASPPTSSSAGGSVIELVSSSLLNPNR-TYAPLSTEDPANSRSISSAHTMGLPLAWVDVSKEIAANVQRVR

Query:  SKMIELAKAHAKALMPSF
         KM ELAKAH+KALMP+F
Subjt:  SKMIELAKAHAKALMPSF

AT5G26980.1 syntaxin of plants 417.9e-2964.1Show/hide
Query:  MASRNQTLLFRK---SLRSVMAPTSSSPVSASPPTSSSAGGSVIELVSSSLLNPNRTYAPLSTEDPANSRSISSAHTMGLPLAWVDVSKEIAANVQRVRS
        MA+RN+TLLFRK   SLRSV AP SSS ++    T S   G VIE+ S+SLLNPNR+YAP+STEDP  S     A T+GLP AWVDVS+EI+ N+QR R+
Subjt:  MASRNQTLLFRK---SLRSVMAPTSSSPVSASPPTSSSAGGSVIELVSSSLLNPNRTYAPLSTEDPANSRSISSAHTMGLPLAWVDVSKEIAANVQRVRS

Query:  KMIELAKAHAKALMPSF
        KM EL KAHAKALMPSF
Subjt:  KMIELAKAHAKALMPSF

AT5G26980.2 syntaxin of plants 417.9e-2964.1Show/hide
Query:  MASRNQTLLFRK---SLRSVMAPTSSSPVSASPPTSSSAGGSVIELVSSSLLNPNRTYAPLSTEDPANSRSISSAHTMGLPLAWVDVSKEIAANVQRVRS
        MA+RN+TLLFRK   SLRSV AP SSS ++    T S   G VIE+ S+SLLNPNR+YAP+STEDP  S     A T+GLP AWVDVS+EI+ N+QR R+
Subjt:  MASRNQTLLFRK---SLRSVMAPTSSSPVSASPPTSSSAGGSVIELVSSSLLNPNRTYAPLSTEDPANSRSISSAHTMGLPLAWVDVSKEIAANVQRVRS

Query:  KMIELAKAHAKALMPSF
        KM EL KAHAKALMPSF
Subjt:  KMIELAKAHAKALMPSF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGAGGAATCAGACTTTGCTTTTTAGGAAATCCTTGAGAAGTGTGATGGCTCCTACCAGCTCTTCGCCAGTTTCGGCATCGCCACCGACTAGTTCTAGC
GCTGGTGGTTCGGTGATTGAATTGGTGAGCTCGTCGTTGCTGAATCCGAATCGGACTTATGCTCCCTTGAGTACTGAGGATCCGGCTAATTCAAGATCTATCTCT
AGTGCACATACCATGGGTCTGCCTCTGGCTTGGGTCGATGTATCCAAAGAAATAGCTGCAAATGTGCAACGTGTACGATCAAAGATGATAGAGTTAGCTAAAGCT
CATGCGAAGGCTTTAATGCCTTCATTTGTTTCTTCTCACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCGAGGAATCAGACTTTGCTTTTTAGGAAATCCTTGAGAAGTGTGATGGCTCCTACCAGCTCTTCGCCAGTTTCGGCATCGCCACCGACTAGTTCTAGC
GCTGGTGGTTCGGTGATTGAATTGGTGAGCTCGTCGTTGCTGAATCCGAATCGGACTTATGCTCCCTTGAGTACTGAGGATCCGGCTAATTCAAGATCTATCTCT
AGTGCACATACCATGGGTCTGCCTCTGGCTTGGGTCGATGTATCCAAAGAAATAGCTGCAAATGTGCAACGTGTACGATCAAAGATGATAGAGTTAGCTAAAGCT
CATGCGAAGGCTTTAATGCCTTCATTTGTTTCTTCTCACTAG
Protein sequenceShow/hide protein sequence
MASRNQTLLFRKSLRSVMAPTSSSPVSASPPTSSSAGGSVIELVSSSLLNPNRTYAPLSTEDPANSRSISSAHTMGLPLAWVDVSKEIAANVQRVRSKMIELAKA
HAKALMPSFVSSH