| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0048297.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.3e-57 | 37.2 | Show/hide |
Query: SSSTSSKLFHPGNKITTVKLDEENFLLWKLQILTTLRGYGLEDYVNSNAIVPSQLLPS--SGDTLATPILNTEYSHWIRQDSLITAWLLGSMSNSLFSEM
+SS +++F GNKI+ VKL+++ FLLWK QILT L Y LE+++ S + PS+ L S S AT N Y W RQD LI++WLLGSMS + ++M
Subjt: SSSTSSKLFHPGNKITTVKLDEENFLLWKLQILTTLRGYGLEDYVNSNAIVPSQLLPS--SGDTLATPILNTEYSHWIRQDSLITAWLLGSMSNSLFSEM
Query: LDCKTAREVWQVLNARFSSRNMARLMDLKSKLETTKKGGLKLEEYFQKIKNLVDALAAAGLKISHEDHVLHILQGLGSEYDSVVSVITDKDISPSLQKVY
L CK+A+E+W+ L FSSR +A+ M K+KL KKG + L+EYF KI VDALA+ +S +DH+L+IL GLGS+Y S++SVI+ + SPS+Q+V
Subjt: LDCKTAREVWQVLNARFSSRNMARLMDLKSKLETTKKGGLKLEEYFQKIKNLVDALAAAGLKISHEDHVLHILQGLGSEYDSVVSVITDKDISPSLQKVY
Query: SLLLAPENRIERHSTINPDGSLRSVNLTTHNPVKQSSTV----------NNDPNRRGKIRDRSSIIDDSGTTMVGPNVKICGRFGHTA------------
SLLL E++ E S + + +L SVN+ T K + + N+ N+RG + S G P +IC + G++A
Subjt: SLLLAPENRIERHSTINPDGSLRSVNLTTHNPVKQSSTV----------NNDPNRRGKIRDRSSIIDDSGTTMVGPNVKICGRFGHTA------------
Query: -------AH-----------------ATLDLSEIFKWFPDSGASNHVTNDFGNLTIGSEYLGDNKVLVGNGADHPSLSSPPLINEPSPLGVAPLSSSNVS
+H A LDL+ W+PDSGA+NH+T+ NL+IGSEY G N++ NG+ P + S L + +N+
Subjt: -------AH-----------------ATLDLSEIFKWFPDSGASNHVTNDFGNLTIGSEYLGDNKVLVGNGADHPSLSSPPLINEPSPLGVAPLSSSNVS
Query: LAPSSSHQTSHVSR
PS + VS+
Subjt: LAPSSSHQTSHVSR
|
|
| TYK10642.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.3e-57 | 37.2 | Show/hide |
Query: SSSTSSKLFHPGNKITTVKLDEENFLLWKLQILTTLRGYGLEDYVNSNAIVPSQLLPS--SGDTLATPILNTEYSHWIRQDSLITAWLLGSMSNSLFSEM
+SS +++F GNKI+ VKL+++ FLLWK QILT L Y LE+++ S + PS+ L S S AT N Y W RQD LI++WLLGSMS + ++M
Subjt: SSSTSSKLFHPGNKITTVKLDEENFLLWKLQILTTLRGYGLEDYVNSNAIVPSQLLPS--SGDTLATPILNTEYSHWIRQDSLITAWLLGSMSNSLFSEM
Query: LDCKTAREVWQVLNARFSSRNMARLMDLKSKLETTKKGGLKLEEYFQKIKNLVDALAAAGLKISHEDHVLHILQGLGSEYDSVVSVITDKDISPSLQKVY
L CK+A+E+W+ L FSSR +A+ M K+KL KKG + L+EYF KI VDALA+ +S +DH+L+IL GLGS+Y S++SVI+ + SPS+Q+V
Subjt: LDCKTAREVWQVLNARFSSRNMARLMDLKSKLETTKKGGLKLEEYFQKIKNLVDALAAAGLKISHEDHVLHILQGLGSEYDSVVSVITDKDISPSLQKVY
Query: SLLLAPENRIERHSTINPDGSLRSVNLTTHNPVKQSSTV----------NNDPNRRGKIRDRSSIIDDSGTTMVGPNVKICGRFGHTA------------
SLLL E++ E S + + +L SVN+ T K + + N+ N+RG + S G P +IC + G++A
Subjt: SLLLAPENRIERHSTINPDGSLRSVNLTTHNPVKQSSTV----------NNDPNRRGKIRDRSSIIDDSGTTMVGPNVKICGRFGHTA------------
Query: -------AH-----------------ATLDLSEIFKWFPDSGASNHVTNDFGNLTIGSEYLGDNKVLVGNGADHPSLSSPPLINEPSPLGVAPLSSSNVS
+H A LDL+ W+PDSGA+NH+T+ NL+IGSEY G N++ NG+ P + S L + +N+
Subjt: -------AH-----------------ATLDLSEIFKWFPDSGASNHVTNDFGNLTIGSEYLGDNKVLVGNGADHPSLSSPPLINEPSPLGVAPLSSSNVS
Query: LAPSSSHQTSHVSR
PS + VS+
Subjt: LAPSSSHQTSHVSR
|
|
| XP_022136882.1 dr1-associated corepressor homolog isoform X1 [Momordica charantia] | 3.7e-49 | 40.19 | Show/hide |
Query: IRQDSLITAWLLGSMSNSLFSEMLDCKTAREVWQVLNARFSSRNMARLMDLKSKLETTKKGGLKLEEYFQKIKNLVDALAAAGLKISHEDHVLHILQGLG
++QD LIT+WL SM + EM+ C TAREVWQ+L ++SRN+AR+M LKSKLE KKG L L++YFQK+K LVD+LAAAG K++ EDH++HIL GL
Subjt: IRQDSLITAWLLGSMSNSLFSEMLDCKTAREVWQVLNARFSSRNMARLMDLKSKLETTKKGGLKLEEYFQKIKNLVDALAAAGLKISHEDHVLHILQGLG
Query: SEYDSVVSVITDKDISPSLQKVYSLLLAPENRIERHSTINPDGSLRSVNLTTHNPVKQSSTVNNDPNRRGKIRDRSSIIDDSG--------TTMVGPNVK
SE++S VSVI+ + + +LQ+VYSLLL+ E R ER+S IN DG+L SVNLT K S++ + +R +++ S +SG + P +
Subjt: SEYDSVVSVITDKDISPSLQKVYSLLLAPENRIERHSTINPDGSLRSVNLTTHNPVKQSSTVNNDPNRRGKIRDRSSIIDDSG--------TTMVGPNVK
Query: ICGRFGHTAAHATLDLSEIF------------------------------------------------------------KWFPDSGASNHVTNDFGNLT
I G+FGHTA L + F W+PDSGA+NHVT++F NL
Subjt: ICGRFGHTAAHATLDLSEIF------------------------------------------------------------KWFPDSGASNHVTNDFGNLT
Query: IGSEYLGDNKVLVGNG
+EY GDN+V +GNG
Subjt: IGSEYLGDNKVLVGNG
|
|
| XP_022154487.1 uncharacterized protein LOC111021757 [Momordica charantia] | 9.0e-72 | 41.12 | Show/hide |
Query: SSDLISSSTSSKLFHPGNKITTVKLDEENFLLWKLQILTTLRGYGLEDYVNSNAIVPSQLLPSSGDTLATPIL--NTEYSHWIRQDSLITAWLLGSMSNS
+SD +SK +PG+K++ V+L+++N LLWK QI T L+G GLE Y++SN P+Q + ++ D ++ L N Y WI+QD LI+AWLLGSM+
Subjt: SSDLISSSTSSKLFHPGNKITTVKLDEENFLLWKLQILTTLRGYGLEDYVNSNAIVPSQLLPSSGDTLATPIL--NTEYSHWIRQDSLITAWLLGSMSNS
Query: LFSEMLDCKTAREVWQVLNARFSSRNMARLMDLKSKLETTKKGGLKLEEYFQKIKNLVDALAAAGLKISHEDHVLHILQGLGSEYDSVVSVITDKDISPS
+ S+MLDCK+ARE+W VL F+SR +AR+M LK KLE KKG L L++YF KIKNLVD+LA AG K+S EDH++HIL GLG E+D+++SVIT +++ +
Subjt: LFSEMLDCKTAREVWQVLNARFSSRNMARLMDLKSKLETTKKGGLKLEEYFQKIKNLVDALAAAGLKISHEDHVLHILQGLGSEYDSVVSVITDKDISPS
Query: LQKVYSLLLAPENRIERHSTINPDGSLRSVNLTTH-----NPVKQSSTVN---NDPNRRGKIRDRSSIIDDSGTTMVGPNVKICGRFGHTAAHATL----
LQ+V SLLL E R ER + IN DGSL SVNLT + N + QS N ++ ++RG+ + S + T P +ICGRFGHTA +
Subjt: LQKVYSLLLAPENRIERHSTINPDGSLRSVNLTTH-----NPVKQSSTVN---NDPNRRGKIRDRSSIIDDSGTTMVGPNVKICGRFGHTAAHATL----
Query: ----------------------------------------------------------DLSEIFKWFPDSGASNHVTNDFGNLTIGSEYLGDNKVLVGNG
D + W+ DSG +NHVTN+FGN ++GSEY GD K+ VGNG
Subjt: ----------------------------------------------------------DLSEIFKWFPDSGASNHVTNDFGNLTIGSEYLGDNKVLVGNG
Query: ADH---PSLSS
+ P+ SS
Subjt: ADH---PSLSS
|
|
| XP_022156747.1 uncharacterized protein LOC111023586 [Momordica charantia] | 3.3e-50 | 38.33 | Show/hide |
Query: KLQILTTLRGYGLEDYVNSNAIVPSQLLPSSGD---TLATPILNTEYSHWIRQDSLITAWLLGSMSNSLFSEMLDCKTAREVWQVLNARFSSRNMARLMD
K Q+LT ++G+GLE Y++S+ PS+ + +GD + T N EY HWI+QD LI+ WLLGSMS + S+MLDC+ +E+W +L F+SRN+AR+M
Subjt: KLQILTTLRGYGLEDYVNSNAIVPSQLLPSSGD---TLATPILNTEYSHWIRQDSLITAWLLGSMSNSLFSEMLDCKTAREVWQVLNARFSSRNMARLMD
Query: LKSKLETTKKGGLKLEEYFQKIKNLVDALAAAGLKISHEDHVLHILQGLGSEYDSVVSVITDKDISPSLQKVYSLLLAPENRIERHSTINPDGSLRSVNL
LKSKLE KKG + L+ YF KIKNLVD+LA AG ++ +DH++HIL LG E+DS+VSVI+ + S+Q+ P + H
Subjt: LKSKLETTKKGGLKLEEYFQKIKNLVDALAAAGLKISHEDHVLHILQGLGSEYDSVVSVITDKDISPSLQKVYSLLLAPENRIERHSTINPDGSLRSVNL
Query: TTHNPVKQSSTVNNDPNRRGKIRDRSSIIDDSGTTMVGPNVKICGRFGHT----AAHATLDLSEIFKWFPDSGASNHVTNDFGNLTIGSEYLGDNKVLVG
P QSST + S +T N + G G T A D + W+PDSGA+NHVTNDFGN ++GS+Y G+ K+ VG
Subjt: TTHNPVKQSSTVNNDPNRRGKIRDRSSIIDDSGTTMVGPNVKICGRFGHT----AAHATLDLSEIFKWFPDSGASNHVTNDFGNLTIGSEYLGDNKVLVG
Query: NGAD--------------HPSLSSPPLINEPSPLGVAPLSSSNVSLA
NG + S SS P+ + + L V ++ + +SL+
Subjt: NGAD--------------HPSLSSPPLINEPSPLGVAPLSSSNVSLA
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7U233 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.1e-58 | 37.2 | Show/hide |
Query: SSSTSSKLFHPGNKITTVKLDEENFLLWKLQILTTLRGYGLEDYVNSNAIVPSQLLPS--SGDTLATPILNTEYSHWIRQDSLITAWLLGSMSNSLFSEM
+SS +++F GNKI+ VKL+++ FLLWK QILT L Y LE+++ S + PS+ L S S AT N Y W RQD LI++WLLGSMS + ++M
Subjt: SSSTSSKLFHPGNKITTVKLDEENFLLWKLQILTTLRGYGLEDYVNSNAIVPSQLLPS--SGDTLATPILNTEYSHWIRQDSLITAWLLGSMSNSLFSEM
Query: LDCKTAREVWQVLNARFSSRNMARLMDLKSKLETTKKGGLKLEEYFQKIKNLVDALAAAGLKISHEDHVLHILQGLGSEYDSVVSVITDKDISPSLQKVY
L CK+A+E+W+ L FSSR +A+ M K+KL KKG + L+EYF KI VDALA+ +S +DH+L+IL GLGS+Y S++SVI+ + SPS+Q+V
Subjt: LDCKTAREVWQVLNARFSSRNMARLMDLKSKLETTKKGGLKLEEYFQKIKNLVDALAAAGLKISHEDHVLHILQGLGSEYDSVVSVITDKDISPSLQKVY
Query: SLLLAPENRIERHSTINPDGSLRSVNLTTHNPVKQSSTV----------NNDPNRRGKIRDRSSIIDDSGTTMVGPNVKICGRFGHTA------------
SLLL E++ E S + + +L SVN+ T K + + N+ N+RG + S G P +IC + G++A
Subjt: SLLLAPENRIERHSTINPDGSLRSVNLTTHNPVKQSSTV----------NNDPNRRGKIRDRSSIIDDSGTTMVGPNVKICGRFGHTA------------
Query: -------AH-----------------ATLDLSEIFKWFPDSGASNHVTNDFGNLTIGSEYLGDNKVLVGNGADHPSLSSPPLINEPSPLGVAPLSSSNVS
+H A LDL+ W+PDSGA+NH+T+ NL+IGSEY G N++ NG+ P + S L + +N+
Subjt: -------AH-----------------ATLDLSEIFKWFPDSGASNHVTNDFGNLTIGSEYLGDNKVLVGNGADHPSLSSPPLINEPSPLGVAPLSSSNVS
Query: LAPSSSHQTSHVSR
PS + VS+
Subjt: LAPSSSHQTSHVSR
|
|
| A0A5D3CH97 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.1e-58 | 37.2 | Show/hide |
Query: SSSTSSKLFHPGNKITTVKLDEENFLLWKLQILTTLRGYGLEDYVNSNAIVPSQLLPS--SGDTLATPILNTEYSHWIRQDSLITAWLLGSMSNSLFSEM
+SS +++F GNKI+ VKL+++ FLLWK QILT L Y LE+++ S + PS+ L S S AT N Y W RQD LI++WLLGSMS + ++M
Subjt: SSSTSSKLFHPGNKITTVKLDEENFLLWKLQILTTLRGYGLEDYVNSNAIVPSQLLPS--SGDTLATPILNTEYSHWIRQDSLITAWLLGSMSNSLFSEM
Query: LDCKTAREVWQVLNARFSSRNMARLMDLKSKLETTKKGGLKLEEYFQKIKNLVDALAAAGLKISHEDHVLHILQGLGSEYDSVVSVITDKDISPSLQKVY
L CK+A+E+W+ L FSSR +A+ M K+KL KKG + L+EYF KI VDALA+ +S +DH+L+IL GLGS+Y S++SVI+ + SPS+Q+V
Subjt: LDCKTAREVWQVLNARFSSRNMARLMDLKSKLETTKKGGLKLEEYFQKIKNLVDALAAAGLKISHEDHVLHILQGLGSEYDSVVSVITDKDISPSLQKVY
Query: SLLLAPENRIERHSTINPDGSLRSVNLTTHNPVKQSSTV----------NNDPNRRGKIRDRSSIIDDSGTTMVGPNVKICGRFGHTA------------
SLLL E++ E S + + +L SVN+ T K + + N+ N+RG + S G P +IC + G++A
Subjt: SLLLAPENRIERHSTINPDGSLRSVNLTTHNPVKQSSTV----------NNDPNRRGKIRDRSSIIDDSGTTMVGPNVKICGRFGHTA------------
Query: -------AH-----------------ATLDLSEIFKWFPDSGASNHVTNDFGNLTIGSEYLGDNKVLVGNGADHPSLSSPPLINEPSPLGVAPLSSSNVS
+H A LDL+ W+PDSGA+NH+T+ NL+IGSEY G N++ NG+ P + S L + +N+
Subjt: -------AH-----------------ATLDLSEIFKWFPDSGASNHVTNDFGNLTIGSEYLGDNKVLVGNGADHPSLSSPPLINEPSPLGVAPLSSSNVS
Query: LAPSSSHQTSHVSR
PS + VS+
Subjt: LAPSSSHQTSHVSR
|
|
| A0A6J1C8R2 dr1-associated corepressor homolog isoform X2 | 1.8e-49 | 40.19 | Show/hide |
Query: IRQDSLITAWLLGSMSNSLFSEMLDCKTAREVWQVLNARFSSRNMARLMDLKSKLETTKKGGLKLEEYFQKIKNLVDALAAAGLKISHEDHVLHILQGLG
++QD LIT+WL SM + EM+ C TAREVWQ+L ++SRN+AR+M LKSKLE KKG L L++YFQK+K LVD+LAAAG K++ EDH++HIL GL
Subjt: IRQDSLITAWLLGSMSNSLFSEMLDCKTAREVWQVLNARFSSRNMARLMDLKSKLETTKKGGLKLEEYFQKIKNLVDALAAAGLKISHEDHVLHILQGLG
Query: SEYDSVVSVITDKDISPSLQKVYSLLLAPENRIERHSTINPDGSLRSVNLTTHNPVKQSSTVNNDPNRRGKIRDRSSIIDDSG--------TTMVGPNVK
SE++S VSVI+ + + +LQ+VYSLLL+ E R ER+S IN DG+L SVNLT K S++ + +R +++ S +SG + P +
Subjt: SEYDSVVSVITDKDISPSLQKVYSLLLAPENRIERHSTINPDGSLRSVNLTTHNPVKQSSTVNNDPNRRGKIRDRSSIIDDSG--------TTMVGPNVK
Query: ICGRFGHTAAHATLDLSEIF------------------------------------------------------------KWFPDSGASNHVTNDFGNLT
I G+FGHTA L + F W+PDSGA+NHVT++F NL
Subjt: ICGRFGHTAAHATLDLSEIF------------------------------------------------------------KWFPDSGASNHVTNDFGNLT
Query: IGSEYLGDNKVLVGNG
+EY GDN+V +GNG
Subjt: IGSEYLGDNKVLVGNG
|
|
| A0A6J1DLT9 uncharacterized protein LOC111021757 | 4.3e-72 | 41.12 | Show/hide |
Query: SSDLISSSTSSKLFHPGNKITTVKLDEENFLLWKLQILTTLRGYGLEDYVNSNAIVPSQLLPSSGDTLATPIL--NTEYSHWIRQDSLITAWLLGSMSNS
+SD +SK +PG+K++ V+L+++N LLWK QI T L+G GLE Y++SN P+Q + ++ D ++ L N Y WI+QD LI+AWLLGSM+
Subjt: SSDLISSSTSSKLFHPGNKITTVKLDEENFLLWKLQILTTLRGYGLEDYVNSNAIVPSQLLPSSGDTLATPIL--NTEYSHWIRQDSLITAWLLGSMSNS
Query: LFSEMLDCKTAREVWQVLNARFSSRNMARLMDLKSKLETTKKGGLKLEEYFQKIKNLVDALAAAGLKISHEDHVLHILQGLGSEYDSVVSVITDKDISPS
+ S+MLDCK+ARE+W VL F+SR +AR+M LK KLE KKG L L++YF KIKNLVD+LA AG K+S EDH++HIL GLG E+D+++SVIT +++ +
Subjt: LFSEMLDCKTAREVWQVLNARFSSRNMARLMDLKSKLETTKKGGLKLEEYFQKIKNLVDALAAAGLKISHEDHVLHILQGLGSEYDSVVSVITDKDISPS
Query: LQKVYSLLLAPENRIERHSTINPDGSLRSVNLTTH-----NPVKQSSTVN---NDPNRRGKIRDRSSIIDDSGTTMVGPNVKICGRFGHTAAHATL----
LQ+V SLLL E R ER + IN DGSL SVNLT + N + QS N ++ ++RG+ + S + T P +ICGRFGHTA +
Subjt: LQKVYSLLLAPENRIERHSTINPDGSLRSVNLTTH-----NPVKQSSTVN---NDPNRRGKIRDRSSIIDDSGTTMVGPNVKICGRFGHTAAHATL----
Query: ----------------------------------------------------------DLSEIFKWFPDSGASNHVTNDFGNLTIGSEYLGDNKVLVGNG
D + W+ DSG +NHVTN+FGN ++GSEY GD K+ VGNG
Subjt: ----------------------------------------------------------DLSEIFKWFPDSGASNHVTNDFGNLTIGSEYLGDNKVLVGNG
Query: ADH---PSLSS
+ P+ SS
Subjt: ADH---PSLSS
|
|
| A0A6J1DSS1 uncharacterized protein LOC111023586 | 1.6e-50 | 38.33 | Show/hide |
Query: KLQILTTLRGYGLEDYVNSNAIVPSQLLPSSGD---TLATPILNTEYSHWIRQDSLITAWLLGSMSNSLFSEMLDCKTAREVWQVLNARFSSRNMARLMD
K Q+LT ++G+GLE Y++S+ PS+ + +GD + T N EY HWI+QD LI+ WLLGSMS + S+MLDC+ +E+W +L F+SRN+AR+M
Subjt: KLQILTTLRGYGLEDYVNSNAIVPSQLLPSSGD---TLATPILNTEYSHWIRQDSLITAWLLGSMSNSLFSEMLDCKTAREVWQVLNARFSSRNMARLMD
Query: LKSKLETTKKGGLKLEEYFQKIKNLVDALAAAGLKISHEDHVLHILQGLGSEYDSVVSVITDKDISPSLQKVYSLLLAPENRIERHSTINPDGSLRSVNL
LKSKLE KKG + L+ YF KIKNLVD+LA AG ++ +DH++HIL LG E+DS+VSVI+ + S+Q+ P + H
Subjt: LKSKLETTKKGGLKLEEYFQKIKNLVDALAAAGLKISHEDHVLHILQGLGSEYDSVVSVITDKDISPSLQKVYSLLLAPENRIERHSTINPDGSLRSVNL
Query: TTHNPVKQSSTVNNDPNRRGKIRDRSSIIDDSGTTMVGPNVKICGRFGHT----AAHATLDLSEIFKWFPDSGASNHVTNDFGNLTIGSEYLGDNKVLVG
P QSST + S +T N + G G T A D + W+PDSGA+NHVTNDFGN ++GS+Y G+ K+ VG
Subjt: TTHNPVKQSSTVNNDPNRRGKIRDRSSIIDDSGTTMVGPNVKICGRFGHT----AAHATLDLSEIFKWFPDSGASNHVTNDFGNLTIGSEYLGDNKVLVG
Query: NGAD--------------HPSLSSPPLINEPSPLGVAPLSSSNVSLA
NG + S SS P+ + + L V ++ + +SL+
Subjt: NGAD--------------HPSLSSPPLINEPSPLGVAPLSSSNVSLA
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.2e-05 | 22.9 | Show/hide |
Query: GNKITTVKLDEEN-FLLWKLQILTTLRGYGLEDYVNSNAIVPSQLLPSSGDTLATPILNTEYSHWIRQDSLITAWLLGSMSNSLFSEMLDCKTAREVWQV
G K K + +N F W+ ++ L GL ++ ++ P DT+ + W D + + +S+ + + ++D TAR +W
Subjt: GNKITTVKLDEEN-FLLWKLQILTTLRGYGLEDYVNSNAIVPSQLLPSSGDTLATPILNTEYSHWIRQDSLITAWLLGSMSNSLFSEMLDCKTAREVWQV
Query: LNARFSSRNMARLMDLKSKLETTKKG-GLKLEEYFQKIKNLVDALAAAGLKISHEDHVLHILQGLGSEYDSVVSVITDKDISPSLQKVYSLLL-------
L + + S+ + + LK +L G + L+ LA G+KI ED + +L L S YD++ + I + L+ V S LL
Subjt: LNARFSSRNMARLMDLKSKLETTKKG-GLKLEEYFQKIKNLVDALAAAGLKISHEDHVLHILQGLGSEYDSVVSVITDKDISPSLQKVYSLLL-------
Query: APENRIERHSTINPDGSLRSVNLTTHN----------PVKQSSTVNNDPN--------------RRGKIRDRSSIIDDSGTTMV--GPNVKICGRFGHTA
PEN+ + T +G RS +++N + S V N N R+GK DD+ MV NV +
Subjt: APENRIERHSTINPDGSLRSVNLTTHN----------PVKQSSTVNNDPN--------------RRGKIRDRSSIIDDSGTTMV--GPNVKICGRFGHTA
Query: AHATLDLSEIFKWFPDSGASNHVT-----------NDFGNLTIGS
H + SE W D+ AS+H T DFG + +G+
Subjt: AHATLDLSEIFKWFPDSGASNHVT-----------NDFGNLTIGS
|
|
| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.5e-29 | 26.39 | Show/hide |
Query: NKITTVKLDEENFLLWKLQILTTLRGYGLEDYVNSNAIVPSQLLPSSGDTLATPILNTEYSHWIRQDSLITAWLLGSMSNSLFSEMLDCKTAREVWQVLN
N KL N+L+W Q+ GY L +++ + +P P++ T A P +N +Y+ W RQD LI + +LG++S S+ + TA ++W+ L
Subjt: NKITTVKLDEENFLLWKLQILTTLRGYGLEDYVNSNAIVPSQLLPSSGDTLATPILNTEYSHWIRQDSLITAWLLGSMSNSLFSEMLDCKTAREVWQVLN
Query: ARFSSRNMARLMDLKSKLETTKKGGLKLEEYFQKIKNLVDALAAAGLKISHEDHVLHILQGLGSEYDSVVSVITDKDISPSLQKVYSLLLAPENRI--ER
+++ + + L+++L+ KG +++Y Q + D LA G + H++ V +L+ L EY V+ I KD P+L +++ LL E++I
Subjt: ARFSSRNMARLMDLKSKLETTKKGGLKLEEYFQKIKNLVDALAAAGLKISHEDHVLHILQGLGSEYDSVVSVITDKDISPSLQKVYSLLLAPENRI--ER
Query: HSTINPDGSLRSVNLTTHNPVKQSSTVNNDPNRRGKIRDRSSIID----DSGTTMVGPN----------VKICGRFGHTA--------------------
+T+ P + N +H ++ NN+ NR + +R++ + +T PN +ICG GH+A
Subjt: HSTINPDGSLRSVNLTTHNPVKQSSTVNNDPNRRGKIRDRSSIID----DSGTTMVGPN----------VKICGRFGHTA--------------------
Query: ------AHATLDLSEIF---KWFPDSGASNHVTNDFGNLTIGSEYLGDNKVLVGNGADHP
A L L + W DSGA++H+T+DF NL++ Y G + V+V +G+ P
Subjt: ------AHATLDLSEIF---KWFPDSGASNHVTNDFGNLTIGSEYLGDNKVLVGNGADHP
|
|
| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 6.8e-22 | 24.23 | Show/hide |
Query: NKITTVKLDEENFLLWKLQILTTLRGYGLEDYVNSNAIVPSQLLPSSGDTLATPILNTEYSHWIRQDSLITAWLLGSMSNSLFSEMLDCKTAREVWQVLN
N KL N+L+W Q+ GY L +++ + +P P++ T A P +N +Y+ W RQD LI + +LG++S S+ + TA ++W+ L
Subjt: NKITTVKLDEENFLLWKLQILTTLRGYGLEDYVNSNAIVPSQLLPSSGDTLATPILNTEYSHWIRQDSLITAWLLGSMSNSLFSEMLDCKTAREVWQVLN
Query: ARFSSRNMARLMDLKSKLETTKKGGLKLEEYFQKIKNLVDALAAAGLKISHEDHVLHILQGLGSEYDSVVSVITDKDISPSLQKVYSLLLAPENRIERHS
+++ + + L + D LA G + H++ V +L+ L +Y V+ I KD PSL +++ E I R S
Subjt: ARFSSRNMARLMDLKSKLETTKKGGLKLEEYFQKIKNLVDALAAAGLKISHEDHVLHILQGLGSEYDSVVSVITDKDISPSLQKVYSLLLAPENRIERHS
Query: TINPDGSLRSVNLTTHNPVKQSSTVNNDPNRRGKIR------DRSSIIDDSGTTMVGPN---------VKICGRFGHTA---------------------
+ S V +T + +++ N + N RG R +RS+ S + N +IC GH+A
Subjt: TINPDGSLRSVNLTTHNPVKQSSTVNNDPNRRGKIR------DRSSIIDDSGTTMVGPN---------VKICGRFGHTA---------------------
Query: -----AHATLDLSEIF---KWFPDSGASNHVTNDFGNLTIGSEYLGDNKVLVGNGADHP
A L ++ + W DSGA++H+T+DF NL+ Y G + V++ +G+ P
Subjt: -----AHATLDLSEIF---KWFPDSGASNHVTNDFGNLTIGSEYLGDNKVLVGNGADHP
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G21280.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 5.2e-09 | 23.61 | Show/hide |
Query: LFHPGN-KITTVKLDEENFLLWKLQILTTLRGYGLEDYVNSNAIVPSQLLPSSGDTLATPILNTEYSHWIRQDSLITAWLLGSMSNSLFSEMLDCKTARE
+ HP + I + DE+N++ WK++ + LR +++ P P Y W + ++++ WL+ SM++ L ++ +TA +
Subjt: LFHPGN-KITTVKLDEENFLLWKLQILTTLRGYGLEDYVNSNAIVPSQLLPSSGDTLATPILNTEYSHWIRQDSLITAWLLGSMSNSLFSEMLDCKTARE
Query: VWQVLNARFSSRNMARLMDLKSKLETTKKGGLKLEEYFQKIKNL
+W+ L F ++ L+ +L T ++GG +EEYF K+ +
Subjt: VWQVLNARFSSRNMARLMDLKSKLETTKKGGLKLEEYFQKIKNL
|
|
| AT1G34070.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162) | 2.2e-15 | 23.29 | Show/hide |
Query: LDEENFLLWKLQILTTLRGYGLEDYVNSNAIVPSQLLPSSGDTLATPILNTEYSHWIRQDSLITAWLLGSMSNSLF-SEMLDCKTAREVWQVLNARFSSR
++E N+ W+ LT + + +++ LLP++ + + +W ++D ++ L G+++ F + T+R++W + +F +
Subjt: LDEENFLLWKLQILTTLRGYGLEDYVNSNAIVPSQLLPSSGDTLATPILNTEYSHWIRQDSLITAWLLGSMSNSLF-SEMLDCKTAREVWQVLNARFSSR
Query: NMARLMDLKSKLETTKKGGLKLEEYFQKIKNLVDALAAAGLKISHEDHVLHILQGLGSEYDSVVSVITDKDISPSLQKVYSLLLAPENRIERHSTINPDG
AR + L S+L T G +++ +Y++K+K L D+L + ++ + V+++L GL ++D++++VI + PS ++L E+R++R NP
Subjt: NMARLMDLKSKLETTKKGGLKLEEYFQKIKNLVDALAAAGLKISHEDHVLHILQGLGSEYDSVVSVITDKDISPSLQKVYSLLLAPENRIERHSTINPDG
Query: SLRSVNLTTHNPVKQSSTV
TH SSTV
Subjt: SLRSVNLTTHNPVKQSSTV
|
|
| AT3G21000.1 Gag-Pol-related retrotransposon family protein | 3.8e-04 | 23.3 | Show/hide |
Query: DEENFLLWKLQILTTLRGYGLEDYVNSNAIVPSQLLPSSGDTLATPILNTEYSHW---IRQDSLITAWLLGSMSNSLFSEMLDCKTAREVWQVLNARFSS
D+ ++ +W +TL GL D V + VP PS LA I E S W + +D+ L S+++S+F + L +A++VW +L
Subjt: DEENFLLWKLQILTTLRGYGLEDYVNSNAIVPSQLLPSSGDTLATPILNTEYSHW---IRQDSLITAWLLGSMSNSLFSEMLDCKTAREVWQVLNARFSS
Query: RNMARLMDLKSKLETTKKGGLKL------EEYFQKIKNLVDALAAAGLKISHEDHVLHILQGLGSEYDSVVSVITD
+ RL + + + LK+ Y K +++ L A L+ S + ++ L +D + S++ +
Subjt: RNMARLMDLKSKLETTKKGGLKL------EEYFQKIKNLVDALAAAGLKISHEDHVLHILQGLGSEYDSVVSVITD
|
|
| AT5G48050.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162) | 1.0e-17 | 29.44 | Show/hide |
Query: TVKLDEENFLLWKLQILTTLRGYGLEDYVNSNAIVPSQLLPSSGDTLATPILNTEYSHWIRQDSLITAWLLGSMSNSLFSEMLDCK-TAREVWQVLNARF
T+ L++ N+ +W+ T +G+ ++ D +TP TE W +D L+ W+ G++++SL ++ TAR++W L F
Subjt: TVKLDEENFLLWKLQILTTLRGYGLEDYVNSNAIVPSQLLPSSGDTLATPILNTEYSHWIRQDSLITAWLLGSMSNSLFSEMLDCK-TAREVWQVLNARF
Query: SSRNMARLMDLKSKLETTKKGGLKLEEYFQKIKNLVDALAAAGLKISHEDHVLHILQGLGSEYDSVVSVITDKDISPSLQKVYSLLLAPENRIERHS
AR + +++L TT L + EY QK+K+L D L IS V+H+L GL +YD +++VI K PS + S+LL E+R+ S
Subjt: SSRNMARLMDLKSKLETTKKGGLKLEEYFQKIKNLVDALAAAGLKISHEDHVLHILQGLGSEYDSVVSVITDKDISPSLQKVYSLLLAPENRIERHS
|
|
