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Moc09g09020 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g09020
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr9:7449236..7449928
RNA-Seq ExpressionMoc09g09020
SyntenyMoc09g09020
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147761.1 uncharacterized protein LOC111016619 [Momordica charantia]3.0e-1678.46Show/hide
Query:  VFSFTLTSSARIWFQQLKRKSIFSFKELASAFVIQFVGGRNRNRPMACLLTIKQKST--LKEYVA
        VFSFTLT S RIWFQQLKRKSI SFKELA AFV QF GG NR+RP+A LLTIKQK+T  LK+YVA
Subjt:  VFSFTLTSSARIWFQQLKRKSIFSFKELASAFVIQFVGGRNRNRPMACLLTIKQKST--LKEYVA

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]4.1e-1367.69Show/hide
Query:  VFSFTLTSSARIWFQQLKRKSIFSFKELASAFVIQFVGGRNRNRPMACLLTIKQKST--LKEYVA
        VFS TL+ SAR+WF+QLKR SI SFK LA AFV QF+GGR+R+RP+A LLTIKQ++T  L +YVA
Subjt:  VFSFTLTSSARIWFQQLKRKSIFSFKELASAFVIQFVGGRNRNRPMACLLTIKQKST--LKEYVA

XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]1.7e-1473.85Show/hide
Query:  VFSFTLTSSARIWFQQLKRKSIFSFKELASAFVIQFVGGRNRNRPMACLLTIKQKST--LKEYVA
        VFSFTLT SAR WF+QLKR SI SFKELA AFV QFVGGR +++P+  LLTIKQK+T  LKEYVA
Subjt:  VFSFTLTSSARIWFQQLKRKSIFSFKELASAFVIQFVGGRNRNRPMACLLTIKQKST--LKEYVA

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]5.3e-1370.77Show/hide
Query:  VFSFTLTSSARIWFQQLKRKSIFSFKELASAFVIQFVGGRNRNRPMACLLTIKQKST--LKEYVA
        VFS TL  SARIWF+QLKR SI SFK LA AFV QFVGGR R+RP+A LLTIKQ++T  L++YVA
Subjt:  VFSFTLTSSARIWFQQLKRKSIFSFKELASAFVIQFVGGRNRNRPMACLLTIKQKST--LKEYVA

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]7.7e-1267.69Show/hide
Query:  VFSFTLTSSARIWFQQLKRKSIFSFKELASAFVIQFVGGRNRNRPMACLLTIKQKS--TLKEYVA
        VFS TL  SARIWF+QLKR SI SFK LA AF+ QFVGGR R+RP+A LLTIKQ++  +L +YVA
Subjt:  VFSFTLTSSARIWFQQLKRKSIFSFKELASAFVIQFVGGRNRNRPMACLLTIKQKS--TLKEYVA

TrEMBL top hitse value%identityAlignment
A0A6J1D3B7 uncharacterized protein LOC1110166191.5e-1678.46Show/hide
Query:  VFSFTLTSSARIWFQQLKRKSIFSFKELASAFVIQFVGGRNRNRPMACLLTIKQKST--LKEYVA
        VFSFTLT S RIWFQQLKRKSI SFKELA AFV QF GG NR+RP+A LLTIKQK+T  LK+YVA
Subjt:  VFSFTLTSSARIWFQQLKRKSIFSFKELASAFVIQFVGGRNRNRPMACLLTIKQKST--LKEYVA

A0A6J1D7D2 uncharacterized protein LOC1110183072.0e-1367.69Show/hide
Query:  VFSFTLTSSARIWFQQLKRKSIFSFKELASAFVIQFVGGRNRNRPMACLLTIKQKST--LKEYVA
        VFS TL+ SAR+WF+QLKR SI SFK LA AFV QF+GGR+R+RP+A LLTIKQ++T  L +YVA
Subjt:  VFSFTLTSSARIWFQQLKRKSIFSFKELASAFVIQFVGGRNRNRPMACLLTIKQKST--LKEYVA

A0A6J1DWY0 uncharacterized protein LOC1110252932.6e-1370.77Show/hide
Query:  VFSFTLTSSARIWFQQLKRKSIFSFKELASAFVIQFVGGRNRNRPMACLLTIKQKST--LKEYVA
        VFS TL  SARIWF+QLKR SI SFK LA AFV QFVGGR R+RP+A LLTIKQ++T  L++YVA
Subjt:  VFSFTLTSSARIWFQQLKRKSIFSFKELASAFVIQFVGGRNRNRPMACLLTIKQKST--LKEYVA

A0A6J1DZ49 uncharacterized protein LOC1110248518.0e-1573.85Show/hide
Query:  VFSFTLTSSARIWFQQLKRKSIFSFKELASAFVIQFVGGRNRNRPMACLLTIKQKST--LKEYVA
        VFSFTLT SAR WF+QLKR SI SFKELA AFV QFVGGR +++P+  LLTIKQK+T  LKEYVA
Subjt:  VFSFTLTSSARIWFQQLKRKSIFSFKELASAFVIQFVGGRNRNRPMACLLTIKQKST--LKEYVA

A0A6J1E1E7 uncharacterized protein LOC1110255483.7e-1267.69Show/hide
Query:  VFSFTLTSSARIWFQQLKRKSIFSFKELASAFVIQFVGGRNRNRPMACLLTIKQKS--TLKEYVA
        VFS TL  SARIWF+QLKR SI SFK LA AF+ QFVGGR R+RP+A LLTIKQ++  +L +YVA
Subjt:  VFSFTLTSSARIWFQQLKRKSIFSFKELASAFVIQFVGGRNRNRPMACLLTIKQKS--TLKEYVA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAATCCGAGATCCGCAAAAAGTTAAAGCTCCAGAAGCCGAAGATGTTGAAGAGTCGACAAACCATCCACCAAATCAAAGCAAATTGAAGATGGGAGGAAACGACAA
GCCGCGAGATGATGTTTTCAATCGACTAGGTCCAGCGACCATGCAGCAACAGAAGTTTGTGGCGTGCATCGGGAGCAAAAGTGACCAGGATGGCAGAGTAGATCTTAAAC
ACACCTTTATTGACAAAAGATTGGTGTTTTCCTTCACATTGACTAGTTCAGCCCGCATATGGTTTCAACAATTGAAGAGGAAGTCAATCTTCTCCTTCAAAGAACTTGCA
AGCGCCTTCGTCATACAGTTCGTTGGAGGGCGGAACAGAAACCGACCCATGGCATGTCTTCTCACCATAAAACAGAAGTCAACACTTAAAGAATACGTGGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTAATCCGAGATCCGCAAAAAGTTAAAGCTCCAGAAGCCGAAGATGTTGAAGAGTCGACAAACCATCCACCAAATCAAAGCAAATTGAAGATGGGAGGAAACGACAA
GCCGCGAGATGATGTTTTCAATCGACTAGGTCCAGCGACCATGCAGCAACAGAAGTTTGTGGCGTGCATCGGGAGCAAAAGTGACCAGGATGGCAGAGTAGATCTTAAAC
ACACCTTTATTGACAAAAGATTGGTGTTTTCCTTCACATTGACTAGTTCAGCCCGCATATGGTTTCAACAATTGAAGAGGAAGTCAATCTTCTCCTTCAAAGAACTTGCA
AGCGCCTTCGTCATACAGTTCGTTGGAGGGCGGAACAGAAACCGACCCATGGCATGTCTTCTCACCATAAAACAGAAGTCAACACTTAAAGAATACGTGGCTTGA
Protein sequenceShow/hide protein sequence
MLIRDPQKVKAPEAEDVEESTNHPPNQSKLKMGGNDKPRDDVFNRLGPATMQQQKFVACIGSKSDQDGRVDLKHTFIDKRLVFSFTLTSSARIWFQQLKRKSIFSFKELA
SAFVIQFVGGRNRNRPMACLLTIKQKSTLKEYVA