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Moc09g09040 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g09040
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionTy1-copia retrotransposon protein
Genome locationchr9:7468675..7469393
RNA-Seq ExpressionMoc09g09040
SyntenyMoc09g09040
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150382.1 uncharacterized protein LOC111018559 [Momordica charantia]5.0e-1060.61Show/hide
Query:  RTDEANKLKDKLSSQFLNSVKANLVESSSASNDRFQNKGKQISRDRAQKNKGLQPKNTGGRTEKLK
        R ++ANK  DKLSSQ +NSVKANL+ESS  + DRF+ KGKQ++++R QKNKG Q K+  GR EK+K
Subjt:  RTDEANKLKDKLSSQFLNSVKANLVESSSASNDRFQNKGKQISRDRAQKNKGLQPKNTGGRTEKLK

XP_022150382.1 uncharacterized protein LOC111018559 [Momordica charantia]4.1e-0475Show/hide
Query:  KLEPHDGSNYCQWSQKLLIFFEQLEIDYIFTT
        KLE  DGSNY +WSQKL IFFEQLE+DY+ TT
Subjt:  KLEPHDGSNYCQWSQKLLIFFEQLEIDYIFTT

XP_022150382.1 uncharacterized protein LOC111018559 [Momordica charantia]1.0e-0732.29Show/hide
Query:  LVKLEPHDGSNYCQWSQKLLIFFEQLEIDYIFTT---------------KDDAEEGPDSARAYQSR----------------------------------
        L KLEP DG+NY +WSQKLLIFFEQLE+DY+ TT                 ++  GP +  A Q +                                  
Subjt:  LVKLEPHDGSNYCQWSQKLLIFFEQLEIDYIFTT---------------KDDAEEGPDSARAYQSR----------------------------------

Query:  --------------------------TDEANKLKDKLSSQFLNSVKANLVESSSASNDRFQNKGKQISRDRAQKNKGLQPKNTGGRTEKLKL
                                  T+EAN+LKDKL+SQ LNSV A LVESS  + DR     KQ    + + ++  Q K  GG+ +K KL
Subjt:  --------------------------TDEANKLKDKLSSQFLNSVKANLVESSSASNDRFQNKGKQISRDRAQKNKGLQPKNTGGRTEKLKL

XP_022152111.1 uncharacterized protein LOC111019900 [Momordica charantia]6.7e-1576.12Show/hide
Query:  RTDEANKLKDKLSSQFLNSVKANLVESSSASNDRFQNKGKQISRDRAQKNKGLQPKNTGGRTEKLKL
        RT+EAN+LKDKL  Q LNSVKANLVESSSAS D F+NKGKQI++D+A+KNKGL+PKNT GR EK KL
Subjt:  RTDEANKLKDKLSSQFLNSVKANLVESSSASNDRFQNKGKQISRDRAQKNKGLQPKNTGGRTEKLKL

XP_022156023.1 uncharacterized protein LOC111022991 [Momordica charantia]2.1e-1674.67Show/hide
Query:  TDEANKLKDKLSSQFLNSVKANLVESSSASNDRFQNKGKQISRDRAQKNKGLQPKNTGGRTEKLKL-----ENPG
        T+EAN+LKDKLSSQ LNSVK NLVESSSAS DRF+ KGK I+RDRAQKNKGL+PKN GGR EK KL     E PG
Subjt:  TDEANKLKDKLSSQFLNSVKANLVESSSASNDRFQNKGKQISRDRAQKNKGLQPKNTGGRTEKLKL-----ENPG

XP_022157709.1 uncharacterized protein LOC111024362 [Momordica charantia]2.4e-1271.64Show/hide
Query:  RTDEANKLKDKLSSQFLNSVKANLVESSSASNDRFQNKGKQISRDRAQKNKGLQPKNTGGRTEKLKL
        RT+EAN+ KDKLSSQ LNSVKANLVESSSA  DRF+NKGKQ   DR Q  KG Q KN GG+ EK KL
Subjt:  RTDEANKLKDKLSSQFLNSVKANLVESSSASNDRFQNKGKQISRDRAQKNKGLQPKNTGGRTEKLKL

TrEMBL top hitse value%identityAlignment
A0A6J1DAK7 uncharacterized protein LOC1110185592.4e-1060.61Show/hide
Query:  RTDEANKLKDKLSSQFLNSVKANLVESSSASNDRFQNKGKQISRDRAQKNKGLQPKNTGGRTEKLK
        R ++ANK  DKLSSQ +NSVKANL+ESS  + DRF+ KGKQ++++R QKNKG Q K+  GR EK+K
Subjt:  RTDEANKLKDKLSSQFLNSVKANLVESSSASNDRFQNKGKQISRDRAQKNKGLQPKNTGGRTEKLK

A0A6J1DAK7 uncharacterized protein LOC1110185592.0e-0475Show/hide
Query:  KLEPHDGSNYCQWSQKLLIFFEQLEIDYIFTT
        KLE  DGSNY +WSQKL IFFEQLE+DY+ TT
Subjt:  KLEPHDGSNYCQWSQKLLIFFEQLEIDYIFTT

A0A6J1DAK7 uncharacterized protein LOC1110185595.0e-0832.29Show/hide
Query:  LVKLEPHDGSNYCQWSQKLLIFFEQLEIDYIFTT---------------KDDAEEGPDSARAYQSR----------------------------------
        L KLEP DG+NY +WSQKLLIFFEQLE+DY+ TT                 ++  GP +  A Q +                                  
Subjt:  LVKLEPHDGSNYCQWSQKLLIFFEQLEIDYIFTT---------------KDDAEEGPDSARAYQSR----------------------------------

Query:  --------------------------TDEANKLKDKLSSQFLNSVKANLVESSSASNDRFQNKGKQISRDRAQKNKGLQPKNTGGRTEKLKL
                                  T+EAN+LKDKL+SQ LNSV A LVESS  + DR     KQ    + + ++  Q K  GG+ +K KL
Subjt:  --------------------------TDEANKLKDKLSSQFLNSVKANLVESSSASNDRFQNKGKQISRDRAQKNKGLQPKNTGGRTEKLKL

A0A6J1DGM8 uncharacterized protein LOC1110199003.3e-1576.12Show/hide
Query:  RTDEANKLKDKLSSQFLNSVKANLVESSSASNDRFQNKGKQISRDRAQKNKGLQPKNTGGRTEKLKL
        RT+EAN+LKDKL  Q LNSVKANLVESSSAS D F+NKGKQI++D+A+KNKGL+PKNT GR EK KL
Subjt:  RTDEANKLKDKLSSQFLNSVKANLVESSSASNDRFQNKGKQISRDRAQKNKGLQPKNTGGRTEKLKL

A0A6J1DPG7 uncharacterized protein LOC1110229911.0e-1674.67Show/hide
Query:  TDEANKLKDKLSSQFLNSVKANLVESSSASNDRFQNKGKQISRDRAQKNKGLQPKNTGGRTEKLKL-----ENPG
        T+EAN+LKDKLSSQ LNSVK NLVESSSAS DRF+ KGK I+RDRAQKNKGL+PKN GGR EK KL     E PG
Subjt:  TDEANKLKDKLSSQFLNSVKANLVESSSASNDRFQNKGKQISRDRAQKNKGLQPKNTGGRTEKLKL-----ENPG

A0A6J1DXB7 uncharacterized protein LOC1110243621.2e-1271.64Show/hide
Query:  RTDEANKLKDKLSSQFLNSVKANLVESSSASNDRFQNKGKQISRDRAQKNKGLQPKNTGGRTEKLKL
        RT+EAN+ KDKLSSQ LNSVKANLVESSSA  DRF+NKGKQ   DR Q  KG Q KN GG+ EK KL
Subjt:  RTDEANKLKDKLSSQFLNSVKANLVESSSASNDRFQNKGKQISRDRAQKNKGLQPKNTGGRTEKLKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCCAACTATTTGAAAGCAAAACTCCATCTACCCATGGCTGCTACCCGATCTGGAAAGGTCCTGCCAGACTTGTCAAATTGGAACCACACGACGGATCCAACTACTG
CCAGTGGTCACAGAAGTTACTAATTTTCTTTGAGCAGTTGGAGATCGACTACATTTTCACTACCAAGGACGATGCAGAAGAAGGACCTGACTCTGCAAGAGCTTATCAGT
CACGTACGGATGAAGCCAACAAGCTAAAGGATAAGCTCTCTTCTCAATTTCTAAATTCAGTTAAAGCAAATTTAGTTGAATCTTCTAGTGCTTCCAATGACAGGTTCCAA
AACAAGGGGAAGCAAATTTCAAGGGATAGAGCTCAAAAGAACAAAGGTCTTCAACCCAAAAATACTGGTGGAAGAACCGAGAAATTGAAACTGGAAAACCCGGGCACAAA
TCCTATCAGTGCACCCAGAGGAAAGATAGGAAAGATCAAAGGACTGCTCCACAAGCCAACCTTACAGAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCCCAACTATTTGAAAGCAAAACTCCATCTACCCATGGCTGCTACCCGATCTGGAAAGGTCCTGCCAGACTTGTCAAATTGGAACCACACGACGGATCCAACTACTG
CCAGTGGTCACAGAAGTTACTAATTTTCTTTGAGCAGTTGGAGATCGACTACATTTTCACTACCAAGGACGATGCAGAAGAAGGACCTGACTCTGCAAGAGCTTATCAGT
CACGTACGGATGAAGCCAACAAGCTAAAGGATAAGCTCTCTTCTCAATTTCTAAATTCAGTTAAAGCAAATTTAGTTGAATCTTCTAGTGCTTCCAATGACAGGTTCCAA
AACAAGGGGAAGCAAATTTCAAGGGATAGAGCTCAAAAGAACAAAGGTCTTCAACCCAAAAATACTGGTGGAAGAACCGAGAAATTGAAACTGGAAAACCCGGGCACAAA
TCCTATCAGTGCACCCAGAGGAAAGATAGGAAAGATCAAAGGACTGCTCCACAAGCCAACCTTACAGAGATAG
Protein sequenceShow/hide protein sequence
MSQLFESKTPSTHGCYPIWKGPARLVKLEPHDGSNYCQWSQKLLIFFEQLEIDYIFTTKDDAEEGPDSARAYQSRTDEANKLKDKLSSQFLNSVKANLVESSSASNDRFQ
NKGKQISRDRAQKNKGLQPKNTGGRTEKLKLENPGTNPISAPRGKIGKIKGLLHKPTLQR