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Moc09g09100 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g09100
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr9:7512995..7521603
RNA-Seq ExpressionMoc09g09100
SyntenyMoc09g09100
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575949.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]2.5e-0880.49Show/hide
Query:  RVEEEMKLYNEMLQVGIEPSVITYNAVLARLFQAGKVDDAK
        +VEE MK+YNEMLQVGI+PSVITYNA+L  LFQAGKV+DAK
Subjt:  RVEEEMKLYNEMLQVGIEPSVITYNAVLARLFQAGKVDDAK

KAG6575955.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]2.5e-0880.49Show/hide
Query:  RVEEEMKLYNEMLQVGIEPSVITYNAVLARLFQAGKVDDAK
        +VEE MK+YNEMLQVGI+PSVITYNA+L  LFQAGKV+DAK
Subjt:  RVEEEMKLYNEMLQVGIEPSVITYNAVLARLFQAGKVDDAK

KAG7014482.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-0880.49Show/hide
Query:  RVEEEMKLYNEMLQVGIEPSVITYNAVLARLFQAGKVDDAK
        +VEE MK+YNEMLQVGI+PSVITYNA+L  LFQAGKV+DAK
Subjt:  RVEEEMKLYNEMLQVGIEPSVITYNAVLARLFQAGKVDDAK

XP_022992036.1 pentatricopeptide repeat-containing protein At1g63330-like [Cucurbita maxima]8.8e-0980.49Show/hide
Query:  RVEEEMKLYNEMLQVGIEPSVITYNAVLARLFQAGKVDDAK
        +VEE MK+YNEMLQVG++PSVITYNA+L  LFQAGKVDDAK
Subjt:  RVEEEMKLYNEMLQVGIEPSVITYNAVLARLFQAGKVDDAK

XP_023548637.1 pentatricopeptide repeat-containing protein At1g63330-like [Cucurbita pepo subsp. pepo]6.7e-0982.93Show/hide
Query:  RVEEEMKLYNEMLQVGIEPSVITYNAVLARLFQAGKVDDAK
        +VEE MK+YNEMLQVGI+PSVITYNA+L  LFQAGKVDDAK
Subjt:  RVEEEMKLYNEMLQVGIEPSVITYNAVLARLFQAGKVDDAK

TrEMBL top hitse value%identityAlignment
A0A1S4DYL6 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like2.8e-0569.77Show/hide
Query:  RVEEEMKLYNEMLQVGIEPSVITYNAVLARLFQAGKVDDAKGL
        +VEE MKLYNEML VG  P+VITY A+L  LF AGKV DAK L
Subjt:  RVEEEMKLYNEMLQVGIEPSVITYNAVLARLFQAGKVDDAKGL

A0A5D3C8J0 Pentatricopeptide repeat-containing protein2.8e-0569.77Show/hide
Query:  RVEEEMKLYNEMLQVGIEPSVITYNAVLARLFQAGKVDDAKGL
        +VEE MKLYNEML VG  P+VITY A+L  LF AGKV DAK L
Subjt:  RVEEEMKLYNEMLQVGIEPSVITYNAVLARLFQAGKVDDAKGL

A0A6J1DSW3 pentatricopeptide repeat-containing protein At1g63330-like4.0e-0774.42Show/hide
Query:  RVEEEMKLYNEMLQVGIEPSVITYNAVLARLFQAGKVDDAKGL
        ++EE MKLYNEMLQVGI PSVITYN++L  LFQAG V DAK L
Subjt:  RVEEEMKLYNEMLQVGIEPSVITYNAVLARLFQAGKVDDAKGL

A0A6J1GP31 putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial2.7e-0878.05Show/hide
Query:  RVEEEMKLYNEMLQVGIEPSVITYNAVLARLFQAGKVDDAK
        +VEE MK+YNEMLQVGI+PS+ITYNA+L  LFQAGKV+DAK
Subjt:  RVEEEMKLYNEMLQVGIEPSVITYNAVLARLFQAGKVDDAK

A0A6J1JSG4 pentatricopeptide repeat-containing protein At1g63330-like4.2e-0980.49Show/hide
Query:  RVEEEMKLYNEMLQVGIEPSVITYNAVLARLFQAGKVDDAK
        +VEE MK+YNEMLQVG++PSVITYNA+L  LFQAGKVDDAK
Subjt:  RVEEEMKLYNEMLQVGIEPSVITYNAVLARLFQAGKVDDAK

SwissProt top hitse value%identityAlignment
Q9ZUU3 Pentatricopeptide repeat-containing protein At2g372305.2e-0436.36Show/hide
Query:  EGRWAGPLAEPYLVPSKGR---DRVEEEMKLYNEMLQVGIEPSVITYNAVLARLFQAGKVDDAKGL
        +G   GP    Y    KG    DRV++ ++++ EM   GIEP+  TY+ +L  L  AGK+ +AK +
Subjt:  EGRWAGPLAEPYLVPSKGR---DRVEEEMKLYNEMLQVGIEPSVITYNAVLARLFQAGKVDDAKGL

Arabidopsis top hitse value%identityAlignment
AT1G62680.1 Pentatricopeptide repeat (PPR) superfamily protein1.1e-0448.78Show/hide
Query:  RVEEEMKLYNEMLQVGIEPSVITYNAVLARLFQAGKVDDAK
        RVE+ MKL+ EM Q G+  + +TYN ++   FQAG VD A+
Subjt:  RVEEEMKLYNEMLQVGIEPSVITYNAVLARLFQAGKVDDAK

AT1G62930.1 Tetratricopeptide repeat (TPR)-like superfamily protein4.1e-0448.78Show/hide
Query:  RVEEEMKLYNEMLQVGIEPSVITYNAVLARLFQAGKVDDAK
        RVEE M+L+ EM Q G+  + +TYN ++  LFQAG  D A+
Subjt:  RVEEEMKLYNEMLQVGIEPSVITYNAVLARLFQAGKVDDAK

AT2G37230.1 Tetratricopeptide repeat (TPR)-like superfamily protein3.7e-0536.36Show/hide
Query:  EGRWAGPLAEPYLVPSKGR---DRVEEEMKLYNEMLQVGIEPSVITYNAVLARLFQAGKVDDAKGL
        +G   GP    Y    KG    DRV++ ++++ EM   GIEP+  TY+ +L  L  AGK+ +AK +
Subjt:  EGRWAGPLAEPYLVPSKGR---DRVEEEMKLYNEMLQVGIEPSVITYNAVLARLFQAGKVDDAKGL

AT4G31850.1 proton gradient regulation 39.0e-0441.46Show/hide
Query:  DRVEEEMKLYNEMLQVGIEPSVITYNAVLARLFQAGKVDDA
        DRV+E  K++  M ++ ++P+V+TYN +LA L + GK+ +A
Subjt:  DRVEEEMKLYNEMLQVGIEPSVITYNAVLARLFQAGKVDDA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACCAGAGTTCTTCATATTCAACTTAAAGACAAACAGTTGTTAGCCTTGCTTCACCAATCATGGCAGATAGAACATCTCTTCAGAGTTTCACTAGCAGTGGAACC
AGATCGTCCGTCCGCAATCGACACACGGCTGGGGACGACCTCTGCTCATGCATGGAGGAGCCTCGAGAAGGAACCCCCACGTATCAATTTTCTTTGGGTTCTTGTCAGTG
AGGACATAGGCCACCTTGAGAAGATTAAGGATGTCATGGGTCGGGCATCTCAACCAACACGAGAGGAGGGAAGATGGGCTGGCCCATTGGCCGAGCCCTATTTGGTGCCG
AGCAAGGGTCGGGATCGAGTGGAAGAAGAAATGAAGCTTTACAATGAAATGCTTCAAGTGGGAATTGAGCCATCTGTGATAACATACAATGCCGTGCTAGCACGTCTTTT
TCAGGCAGGCAAGGTTGATGATGCAAAAGGTCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAACCAGAGTTCTTCATATTCAACTTAAAGACAAACAGTTGTTAGCCTTGCTTCACCAATCATGGCAGATAGAACATCTCTTCAGAGTTTCACTAGCAGTGGAACC
AGATCGTCCGTCCGCAATCGACACACGGCTGGGGACGACCTCTGCTCATGCATGGAGGAGCCTCGAGAAGGAACCCCCACGTATCAATTTTCTTTGGGTTCTTGTCAGTG
AGGACATAGGCCACCTTGAGAAGATTAAGGATGTCATGGGTCGGGCATCTCAACCAACACGAGAGGAGGGAAGATGGGCTGGCCCATTGGCCGAGCCCTATTTGGTGCCG
AGCAAGGGTCGGGATCGAGTGGAAGAAGAAATGAAGCTTTACAATGAAATGCTTCAAGTGGGAATTGAGCCATCTGTGATAACATACAATGCCGTGCTAGCACGTCTTTT
TCAGGCAGGCAAGGTTGATGATGCAAAAGGTCTTTAG
Protein sequenceShow/hide protein sequence
MATRVLHIQLKDKQLLALLHQSWQIEHLFRVSLAVEPDRPSAIDTRLGTTSAHAWRSLEKEPPRINFLWVLVSEDIGHLEKIKDVMGRASQPTREEGRWAGPLAEPYLVP
SKGRDRVEEEMKLYNEMLQVGIEPSVITYNAVLARLFQAGKVDDAKGL