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Moc09g09600 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g09600
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr9:8078857..8082450
RNA-Seq ExpressionMoc09g09600
SyntenyMoc09g09600
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041397.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.8e-0627.43Show/hide
Query:  KSPIFNRRTRASIYEEERFGWLSLPPKGKAYGRPWFETAKFSVSFLVLSGLKLLMNKGLDFG-KTFGKNSPMEFLFSNLLSISP-KDTTVANCWVDDFYD
        K P++ +R   S Y++E+ G      K  +   PW         F    G K+   + + F    +  NSP+  +   L ++S  K  +V + W     D
Subjt:  KSPIFNRRTRASIYEEERFGWLSLPPKGKAYGRPWFETAKFSVSFLVLSGLKLLMNKGLDFG-KTFGKNSPMEFLFSNLLSISP-KDTTVANCWVDDFYD

Query:  WNLTFKRGFQDNEMVLELLNSFRKDGRIRSSGTLRVGRLPLP----NPSSDFWSF----------LFKELDFASCMPRAVEDSLLKALQEGSPKGKPKSF
        WN+   R  +D+E  L           I++S       LP P     PS   W            + K+L  AS  P     SL K L +     K K F
Subjt:  WNLTFKRGFQDNEMVLELLNSFRKDGRIRSSGTLRVGRLPLP----NPSSDFWSF----------LFKELDFASCMPRAVEDSLLKALQEGSPKGKPKSF

Query:  --GVVKG-LNTADRLQRRFPN---SPSVCNLCIRIEE
           ++ G +NTADRLQ+R PN   SP+ C +C + +E
Subjt:  --GVVKG-LNTADRLQRRFPN---SPSVCNLCIRIEE

KAA0044556.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]3.1e-0627.43Show/hide
Query:  KSPIFNRRTRASIYEEERFGWLSLPPKGKAYGRPWFETAKFSVSFLVLSGLKLLMNKGLDFG-KTFGKNSPMEFLFSNLLSISP-KDTTVANCWVDDFYD
        K P++ +R   S Y++E+ G      K  +   PW         F    G K+   + + F    +  NSP+      L ++S  K  +V + W     D
Subjt:  KSPIFNRRTRASIYEEERFGWLSLPPKGKAYGRPWFETAKFSVSFLVLSGLKLLMNKGLDFG-KTFGKNSPMEFLFSNLLSISP-KDTTVANCWVDDFYD

Query:  WNLTFKRGFQDNEMVLELLNSFRKDGRIRSSGTLRVGRLPLP----NPSSDFWSF----------LFKELDFASCMPRAVEDSLLKALQEGSPKGKPKSF
        WN+   R  +D+E  L           I++S       LP P     PS   W            + K+L  AS  P     SL K L +     K K F
Subjt:  WNLTFKRGFQDNEMVLELLNSFRKDGRIRSSGTLRVGRLPLP----NPSSDFWSF----------LFKELDFASCMPRAVEDSLLKALQEGSPKGKPKSF

Query:  --GVVKG-LNTADRLQRRFPN---SPSVCNLCIRIEE
           ++ G +NTADRLQ+R PN   SP+ C +C + +E
Subjt:  --GVVKG-LNTADRLQRRFPN---SPSVCNLCIRIEE

XP_022158566.1 uncharacterized protein LOC111025019 [Momordica charantia]4.4e-0836.19Show/hide
Query:  RRTRASIYEEERFGWLSLPPKGKAYGRPWFETAKFSVSFLVLSGLKLLMNKGLDFG-KTFGKNSPMEFLFSNLLSISPKDTT-VANCWVDDFYDWNLTFK
        RR  ASIY  +++GWL+  PKGKA GRPWF+ AK   +F  +   K      L F    +  N P+   F ++ ++S K    V +CW ++   W+L  +
Subjt:  RRTRASIYEEERFGWLSLPPKGKAYGRPWFETAKFSVSFLVLSGLKLLMNKGLDFG-KTFGKNSPMEFLFSNLLSISPKDTT-VANCWVDDFYDWNLTFK

Query:  RGFQD
        RG  D
Subjt:  RGFQD

TrEMBL top hitse value%identityAlignment
A0A5A7TIB8 LINE-1 retrotransposable element ORF2 protein8.9e-0727.43Show/hide
Query:  KSPIFNRRTRASIYEEERFGWLSLPPKGKAYGRPWFETAKFSVSFLVLSGLKLLMNKGLDFG-KTFGKNSPMEFLFSNLLSISP-KDTTVANCWVDDFYD
        K P++ +R   S Y++E+ G      K  +   PW         F    G K+   + + F    +  NSP+  +   L ++S  K  +V + W     D
Subjt:  KSPIFNRRTRASIYEEERFGWLSLPPKGKAYGRPWFETAKFSVSFLVLSGLKLLMNKGLDFG-KTFGKNSPMEFLFSNLLSISP-KDTTVANCWVDDFYD

Query:  WNLTFKRGFQDNEMVLELLNSFRKDGRIRSSGTLRVGRLPLP----NPSSDFWSF----------LFKELDFASCMPRAVEDSLLKALQEGSPKGKPKSF
        WN+   R  +D+E  L           I++S       LP P     PS   W            + K+L  AS  P     SL K L +     K K F
Subjt:  WNLTFKRGFQDNEMVLELLNSFRKDGRIRSSGTLRVGRLPLP----NPSSDFWSF----------LFKELDFASCMPRAVEDSLLKALQEGSPKGKPKSF

Query:  --GVVKG-LNTADRLQRRFPN---SPSVCNLCIRIEE
           ++ G +NTADRLQ+R PN   SP+ C +C + +E
Subjt:  --GVVKG-LNTADRLQRRFPN---SPSVCNLCIRIEE

A0A5A7TR15 LINE-1 retrotransposable element ORF2 protein1.5e-0627.43Show/hide
Query:  KSPIFNRRTRASIYEEERFGWLSLPPKGKAYGRPWFETAKFSVSFLVLSGLKLLMNKGLDFG-KTFGKNSPMEFLFSNLLSISP-KDTTVANCWVDDFYD
        K P++ +R   S Y++E+ G      K  +   PW         F    G K+   + + F    +  NSP+      L ++S  K  +V + W     D
Subjt:  KSPIFNRRTRASIYEEERFGWLSLPPKGKAYGRPWFETAKFSVSFLVLSGLKLLMNKGLDFG-KTFGKNSPMEFLFSNLLSISP-KDTTVANCWVDDFYD

Query:  WNLTFKRGFQDNEMVLELLNSFRKDGRIRSSGTLRVGRLPLP----NPSSDFWSF----------LFKELDFASCMPRAVEDSLLKALQEGSPKGKPKSF
        WN+   R  +D+E  L           I++S       LP P     PS   W            + K+L  AS  P     SL K L +     K K F
Subjt:  WNLTFKRGFQDNEMVLELLNSFRKDGRIRSSGTLRVGRLPLP----NPSSDFWSF----------LFKELDFASCMPRAVEDSLLKALQEGSPKGKPKSF

Query:  --GVVKG-LNTADRLQRRFPN---SPSVCNLCIRIEE
           ++ G +NTADRLQ+R PN   SP+ C +C + +E
Subjt:  --GVVKG-LNTADRLQRRFPN---SPSVCNLCIRIEE

A0A6J1E196 uncharacterized protein LOC1110250192.1e-0836.19Show/hide
Query:  RRTRASIYEEERFGWLSLPPKGKAYGRPWFETAKFSVSFLVLSGLKLLMNKGLDFG-KTFGKNSPMEFLFSNLLSISPKDTT-VANCWVDDFYDWNLTFK
        RR  ASIY  +++GWL+  PKGKA GRPWF+ AK   +F  +   K      L F    +  N P+   F ++ ++S K    V +CW ++   W+L  +
Subjt:  RRTRASIYEEERFGWLSLPPKGKAYGRPWFETAKFSVSFLVLSGLKLLMNKGLDFG-KTFGKNSPMEFLFSNLLSISPKDTT-VANCWVDDFYDWNLTFK

Query:  RGFQD
        RG  D
Subjt:  RGFQD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGAAGGTTCACTAGAGGGTGTTAGCATGGGGGCCAAAGCTGTCAAGTCTCCCATCTTCAATAGGCGAACTAGAGCTAGCATCTATGAAGAGGAGCGTTTCGGATG
GTTGTCCCTCCCTCCTAAAGGTAAAGCTTATGGGAGGCCTTGGTTTGAAACAGCAAAATTCAGTGTCTCTTTCTTAGTTTTGTCCGGTTTGAAGCTGTTAATGAACAAAG
GATTAGATTTTGGAAAGACATTTGGCAAAAACAGTCCGATGGAATTTCTTTTTTCAAATTTGCTCAGTATTTCTCCCAAGGATACTACTGTGGCTAATTGTTGGGTTGAC
GACTTTTATGATTGGAACTTGACCTTCAAAAGGGGCTTTCAGGACAATGAGATGGTATTGGAGTTACTGAATTCTTTTAGAAAAGATGGGAGGATAAGATCTTCAGGAAC
CTTGAGAGTAGGCAGACTTCCTCTACCAAATCCTTCTTCAGATTTCTGGTCCTTTTTGTTCAAAGAGTTGGATTTTGCCAGCTGTATGCCTAGAGCTGTGGAAGATTCAC
TTCTCAAGGCCCTTCAGGAGGGTTCTCCAAAGGGAAAGCCAAAGTCCTTTGGGGTTGTGAAGGGTCTTAATACTGCTGATAGGCTTCAGAGAAGGTTCCCCAATTCCCCT
TCCGTATGCAACCTTTGTATTAGGATAGAGGAGTGTCCCACTTGTTTCTCCACTGCCCTTTTCCCTATAGAGGAGAGGATGGGCATTGCCAAGTTCAAGCCTCTTCTTGA
TGTACCTAGTCTAGTACATTTTGAAGTTATACTCCTAATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGAAGGTTCACTAGAGGGTGTTAGCATGGGGGCCAAAGCTGTCAAGTCTCCCATCTTCAATAGGCGAACTAGAGCTAGCATCTATGAAGAGGAGCGTTTCGGATG
GTTGTCCCTCCCTCCTAAAGGTAAAGCTTATGGGAGGCCTTGGTTTGAAACAGCAAAATTCAGTGTCTCTTTCTTAGTTTTGTCCGGTTTGAAGCTGTTAATGAACAAAG
GATTAGATTTTGGAAAGACATTTGGCAAAAACAGTCCGATGGAATTTCTTTTTTCAAATTTGCTCAGTATTTCTCCCAAGGATACTACTGTGGCTAATTGTTGGGTTGAC
GACTTTTATGATTGGAACTTGACCTTCAAAAGGGGCTTTCAGGACAATGAGATGGTATTGGAGTTACTGAATTCTTTTAGAAAAGATGGGAGGATAAGATCTTCAGGAAC
CTTGAGAGTAGGCAGACTTCCTCTACCAAATCCTTCTTCAGATTTCTGGTCCTTTTTGTTCAAAGAGTTGGATTTTGCCAGCTGTATGCCTAGAGCTGTGGAAGATTCAC
TTCTCAAGGCCCTTCAGGAGGGTTCTCCAAAGGGAAAGCCAAAGTCCTTTGGGGTTGTGAAGGGTCTTAATACTGCTGATAGGCTTCAGAGAAGGTTCCCCAATTCCCCT
TCCGTATGCAACCTTTGTATTAGGATAGAGGAGTGTCCCACTTGTTTCTCCACTGCCCTTTTCCCTATAGAGGAGAGGATGGGCATTGCCAAGTTCAAGCCTCTTCTTGA
TGTACCTAGTCTAGTACATTTTGAAGTTATACTCCTAATGTAG
Protein sequenceShow/hide protein sequence
MGEGSLEGVSMGAKAVKSPIFNRRTRASIYEEERFGWLSLPPKGKAYGRPWFETAKFSVSFLVLSGLKLLMNKGLDFGKTFGKNSPMEFLFSNLLSISPKDTTVANCWVD
DFYDWNLTFKRGFQDNEMVLELLNSFRKDGRIRSSGTLRVGRLPLPNPSSDFWSFLFKELDFASCMPRAVEDSLLKALQEGSPKGKPKSFGVVKGLNTADRLQRRFPNSP
SVCNLCIRIEECPTCFSTALFPIEERMGIAKFKPLLDVPSLVHFEVILLM