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Moc09g09620 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g09620
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr9:8095257..8098262
RNA-Seq ExpressionMoc09g09620
SyntenyMoc09g09620
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0044260 - cellular macromolecule metabolic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN72548.1 hypothetical protein VITISV_035350, partial [Vitis vinifera]7.5e-0936.97Show/hide
Query:  PWFEIAKNSIIFFKFLSFKVKHGDRVRFWLYRWTGNSTLVQDFLEIC-ALPLKEATVSDSRKDK-QLAWDLGLRRGLLDKEVGGWVDLISRLDTTRIGVG
        PW  IA+    F  F+   V +G+R+RFW   W GN +L   F ++   + +K  TVS+   +   LAW+L  RR L D E+     L+S L + R    
Subjt:  PWFEIAKNSIIFFKFLSFKVKHGDRVRFWLYRWTGNSTLVQDFLEIC-ALPLKEATVSDSRKDK-QLAWDLGLRRGLLDKEVGGWVDLISRLDTTRIGVG

Query:  -ANKVVWSLDSSGVYTAKS
         A+   WSL SSG++T KS
Subjt:  -ANKVVWSLDSSGVYTAKS

RVW15777.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]7.5e-0936.97Show/hide
Query:  PWFEIAKNSIIFFKFLSFKVKHGDRVRFWLYRWTGNSTLVQDFLEIC-ALPLKEATVSDSRKDK-QLAWDLGLRRGLLDKEVGGWVDLISRLDTTRIGVG
        PW  IA+    F  F+   V +G+R+RFW   W GN +L   F ++   + +K  TVS+   +   LAW+L  RR L D E+     L+S L + R    
Subjt:  PWFEIAKNSIIFFKFLSFKVKHGDRVRFWLYRWTGNSTLVQDFLEIC-ALPLKEATVSDSRKDK-QLAWDLGLRRGLLDKEVGGWVDLISRLDTTRIGVG

Query:  -ANKVVWSLDSSGVYTAKS
         A+   WSL SSG++T KS
Subjt:  -ANKVVWSLDSSGVYTAKS

RVX11537.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]5.7e-0936.97Show/hide
Query:  PWFEIAKNSIIFFKFLSFKVKHGDRVRFWLYRWTGNSTLVQDFLEIC-ALPLKEATVSDSRKDK-QLAWDLGLRRGLLDKEVGGWVDLISRLDTTRIGVG
        PW  IA+    F  F+   V +G+R+RFW   W GN +L   F ++   + +K  TVS+   +   LAW+L  RR L D E+     L+S L + R    
Subjt:  PWFEIAKNSIIFFKFLSFKVKHGDRVRFWLYRWTGNSTLVQDFLEIC-ALPLKEATVSDSRKDK-QLAWDLGLRRGLLDKEVGGWVDLISRLDTTRIGVG

Query:  -ANKVVWSLDSSGVYTAKS
         A+   WSL SSG++T KS
Subjt:  -ANKVVWSLDSSGVYTAKS

XP_022149391.1 uncharacterized protein LOC111017819 [Momordica charantia]4.7e-1141.86Show/hide
Query:  GDRVRFWLYRWTGNSTLVQDFLEICALPL-KEATVSDSRKDKQLAWDLGLRRGLLDKEVGGWVDLISRLDTTRIGVGANKVVWSLD
        G R+RFWL +W G +TL +DF ++ A+ L KEA V+D   +    WDLG RRGL D+E+  W  ++ RL+   +   ++ VVW L+
Subjt:  GDRVRFWLYRWTGNSTLVQDFLEICALPL-KEATVSDSRKDKQLAWDLGLRRGLLDKEVGGWVDLISRLDTTRIGVGANKVVWSLD

XP_022158566.1 uncharacterized protein LOC111025019 [Momordica charantia]7.0e-1547.78Show/hide
Query:  MSKKPKGKAAGKPWFEIAKNSIIFFKFLSFKVKHGDRVRFWLYRWTGNSTLVQDFLEICALPLKE-ATVSDSRKDKQLAWDLGLRRGLLD
        ++K PKGKA G+PWF+IAKN   F + + FK   GDR+ FW+ +W GN  L+ +F ++ AL LK+ A V D   ++   WDL LRRGL D
Subjt:  MSKKPKGKAAGKPWFEIAKNSIIFFKFLSFKVKHGDRVRFWLYRWTGNSTLVQDFLEICALPLKE-ATVSDSRKDKQLAWDLGLRRGLLD

TrEMBL top hitse value%identityAlignment
A0A438DVQ8 LINE-1 retrotransposable element ORF2 protein1.1e-0836.13Show/hide
Query:  PWFEIAKNSIIFFKFLSFKVKHGDRVRFWLYRWTGNSTLVQDFLEIC-ALPLKEATVSDSRKDK-QLAWDLGLRRGLLDKEVGGWVDLISRLDTTRIGVG
        PW  IA+    F  F+   V +G+R+RFW   W GN +L   F ++   + +K  TVS+   +   LAW+L  RR L D E+     L+S L + R    
Subjt:  PWFEIAKNSIIFFKFLSFKVKHGDRVRFWLYRWTGNSTLVQDFLEIC-ALPLKEATVSDSRKDK-QLAWDLGLRRGLLDKEVGGWVDLISRLDTTRIGVG

Query:  -ANKVVWSLDSSGVYTAKS
         A+   WSL SSG+++ KS
Subjt:  -ANKVVWSLDSSGVYTAKS

A0A438FLV0 Putative ribonuclease H protein1.8e-0834.68Show/hide
Query:  GKPWFEIAKNSIIFFKFLSFKVKHGDRVRFWLYRWTGNSTLVQDFLEIC-ALPLKEATVSDSRKDK-QLAWDLGLRRGLLDKEVGGWVDLISRLDTTRIG
        G PW  IA+    F  F+   V +G+R+RFW   W GN TL   F+++   + +K  TVS+   +   L+W+   RR L + E    +DL+ RL ++R  
Subjt:  GKPWFEIAKNSIIFFKFLSFKVKHGDRVRFWLYRWTGNSTLVQDFLEIC-ALPLKEATVSDSRKDK-QLAWDLGLRRGLLDKEVGGWVDLISRLDTTRIG

Query:  V-----GANKVVWSLDSSGVYTAK
        V      ++  VWSL SSG+++ K
Subjt:  V-----GANKVVWSLDSSGVYTAK

A0A6J1D884 uncharacterized protein LOC1110178192.3e-1141.86Show/hide
Query:  GDRVRFWLYRWTGNSTLVQDFLEICALPL-KEATVSDSRKDKQLAWDLGLRRGLLDKEVGGWVDLISRLDTTRIGVGANKVVWSLD
        G R+RFWL +W G +TL +DF ++ A+ L KEA V+D   +    WDLG RRGL D+E+  W  ++ RL+   +   ++ VVW L+
Subjt:  GDRVRFWLYRWTGNSTLVQDFLEICALPL-KEATVSDSRKDKQLAWDLGLRRGLLDKEVGGWVDLISRLDTTRIGVGANKVVWSLD

A0A6J1E196 uncharacterized protein LOC1110250193.4e-1547.78Show/hide
Query:  MSKKPKGKAAGKPWFEIAKNSIIFFKFLSFKVKHGDRVRFWLYRWTGNSTLVQDFLEICALPLKE-ATVSDSRKDKQLAWDLGLRRGLLD
        ++K PKGKA G+PWF+IAKN   F + + FK   GDR+ FW+ +W GN  L+ +F ++ AL LK+ A V D   ++   WDL LRRGL D
Subjt:  MSKKPKGKAAGKPWFEIAKNSIIFFKFLSFKVKHGDRVRFWLYRWTGNSTLVQDFLEICALPLKE-ATVSDSRKDKQLAWDLGLRRGLLD

A0A803QEA6 Uncharacterized protein3.1e-0828.12Show/hide
Query:  PWFEIAKNSIIFFKFLSFKVKHGDRVRFWLYRWTGNSTLVQDFLEICALP-LKEATVSDSRKDK------QLAWDLGLRRGLLDKEVGGWVDLISRLDTT
        PW +I+     + K + FKV +G+R+RFW   W G S+L   F  +  +   K  ++ +   D+        +WDL  RR ++D+E+     L+ +L+  
Subjt:  PWFEIAKNSIIFFKFLSFKVKHGDRVRFWLYRWTGNSTLVQDFLEICALP-LKEATVSDSRKDK------QLAWDLGLRRGLLDKEVGGWVDLISRLDTT

Query:  RI-GVGANKVVWSLDSSGVYTAKSGNSF
        R+  +  +   W  DS G++++KS  S+
Subjt:  RI-GVGANKVVWSLDSSGVYTAKSGNSF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCAAAAAGCCCAAAGGAAAAGCGGCCGGCAAGCCTTGGTTTGAAATAGCAAAGAACAGCATCATTTTCTTCAAGTTTCTGTCCTTCAAAGTAAAACATGGTGATAG
AGTTCGCTTTTGGTTGTACAGATGGACGGGGAATTCCACTCTTGTCCAAGACTTTCTTGAAATTTGTGCTTTACCTTTGAAGGAAGCCACAGTTTCTGACTCTCGGAAAG
ATAAGCAGCTCGCATGGGATCTAGGCCTAAGGAGGGGGCTGCTTGACAAAGAAGTAGGGGGCTGGGTTGATCTTATAAGTAGGTTGGACACCACTCGGATTGGAGTGGGA
GCTAACAAAGTGGTTTGGTCTCTAGATTCCTCTGGTGTTTATACAGCAAAATCGGGTAATTCCTTTGTTCCTAGGGTTCCTACGAAAGTGCCGGAAGAAGCTCCTCAAAT
GGGCTGCTTGGCTAAAGGAAATGAGATGTTGGACGAGGAGATTGACTTGGCTTTCGAGCTATGTGATAGGGTTGTTGAAGGCAAGGATTGCACTTGGCTTGGCCAATGGG
AAGGAGCTTGGTTCAAAACTGAAGGAAGAGAAAATGGTTACATCCCTCGGGAGTGCTTTATAAACATTGAAGACGTAGAATTTTTGGTTAGGTTTGTATTGTCAGAGGTT
GTAAGAGATCTTGTTGACAAAAGAGCAGAGCTCCGGGTGTGTCTTGGGGAGTTGACGAGAAAGGGTCAGAACCCTAGCAAGTTGCAGGGGAAAAGGATGGTTGATATGGC
TGACTCTCAACCCAAAATTATGAAGCATGGAAAAGGAAAAATTCAAATGGAAACCGCCGTCTATGATGATTCAATGCCTGATTCGTTAATCGCAGTTTGTTCGAAGGGGA
GATGGGGGGGGGGGGTAAAGAACTTAAGTCGGTTTAGTCGCACGAGGAAGACCACCTGGGAGGTGAGCAAAGATGCGGATTTTGAGAATAAGAAGCCCCTTGCAAAGTTT
GTTGTTGTTGTGTGTCCTATCACAAAGTTGTCTTCTCAGTCGGTCCTTAGCATAATATCTAAAGTTAGCCTAGATTCTTCGATGTGCCTGTCCTATGCTGATGGCTTCGT
TGGGGGAAGGGTTCCACATCTTGCTCCTTTGCTGAGTGCTACTTGTGCCAGTCCTTTCGAGCGGGCCAACCTTTTGTCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCCAAAAAGCCCAAAGGAAAAGCGGCCGGCAAGCCTTGGTTTGAAATAGCAAAGAACAGCATCATTTTCTTCAAGTTTCTGTCCTTCAAAGTAAAACATGGTGATAG
AGTTCGCTTTTGGTTGTACAGATGGACGGGGAATTCCACTCTTGTCCAAGACTTTCTTGAAATTTGTGCTTTACCTTTGAAGGAAGCCACAGTTTCTGACTCTCGGAAAG
ATAAGCAGCTCGCATGGGATCTAGGCCTAAGGAGGGGGCTGCTTGACAAAGAAGTAGGGGGCTGGGTTGATCTTATAAGTAGGTTGGACACCACTCGGATTGGAGTGGGA
GCTAACAAAGTGGTTTGGTCTCTAGATTCCTCTGGTGTTTATACAGCAAAATCGGGTAATTCCTTTGTTCCTAGGGTTCCTACGAAAGTGCCGGAAGAAGCTCCTCAAAT
GGGCTGCTTGGCTAAAGGAAATGAGATGTTGGACGAGGAGATTGACTTGGCTTTCGAGCTATGTGATAGGGTTGTTGAAGGCAAGGATTGCACTTGGCTTGGCCAATGGG
AAGGAGCTTGGTTCAAAACTGAAGGAAGAGAAAATGGTTACATCCCTCGGGAGTGCTTTATAAACATTGAAGACGTAGAATTTTTGGTTAGGTTTGTATTGTCAGAGGTT
GTAAGAGATCTTGTTGACAAAAGAGCAGAGCTCCGGGTGTGTCTTGGGGAGTTGACGAGAAAGGGTCAGAACCCTAGCAAGTTGCAGGGGAAAAGGATGGTTGATATGGC
TGACTCTCAACCCAAAATTATGAAGCATGGAAAAGGAAAAATTCAAATGGAAACCGCCGTCTATGATGATTCAATGCCTGATTCGTTAATCGCAGTTTGTTCGAAGGGGA
GATGGGGGGGGGGGGTAAAGAACTTAAGTCGGTTTAGTCGCACGAGGAAGACCACCTGGGAGGTGAGCAAAGATGCGGATTTTGAGAATAAGAAGCCCCTTGCAAAGTTT
GTTGTTGTTGTGTGTCCTATCACAAAGTTGTCTTCTCAGTCGGTCCTTAGCATAATATCTAAAGTTAGCCTAGATTCTTCGATGTGCCTGTCCTATGCTGATGGCTTCGT
TGGGGGAAGGGTTCCACATCTTGCTCCTTTGCTGAGTGCTACTTGTGCCAGTCCTTTCGAGCGGGCCAACCTTTTGTCCTAG
Protein sequenceShow/hide protein sequence
MSKKPKGKAAGKPWFEIAKNSIIFFKFLSFKVKHGDRVRFWLYRWTGNSTLVQDFLEICALPLKEATVSDSRKDKQLAWDLGLRRGLLDKEVGGWVDLISRLDTTRIGVG
ANKVVWSLDSSGVYTAKSGNSFVPRVPTKVPEEAPQMGCLAKGNEMLDEEIDLAFELCDRVVEGKDCTWLGQWEGAWFKTEGRENGYIPRECFINIEDVEFLVRFVLSEV
VRDLVDKRAELRVCLGELTRKGQNPSKLQGKRMVDMADSQPKIMKHGKGKIQMETAVYDDSMPDSLIAVCSKGRWGGGVKNLSRFSRTRKTTWEVSKDADFENKKPLAKF
VVVVCPITKLSSQSVLSIISKVSLDSSMCLSYADGFVGGRVPHLAPLLSATCASPFERANLLS