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Moc09g09860 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g09860
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Genome locationchr9:8336994..8337488
RNA-Seq ExpressionMoc09g09860
SyntenyMoc09g09860
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044237 - cellular metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004672 - protein kinase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8717380.1 hypothetical protein F3Y22_tig00110050pilonHSYRG00143 [Hibiscus syriacus]4.2e-3058.78Show/hide
Query:  KMYQEKCISNRLNLKEQFHTLRMEECMKILDHLSNLNSIIFELEAIELKIDDEDKPLRLILSLPPSYEHMKPILMYGKDNLNFVEATSKLLSEERRLKSE
        +MYQ K +SNRL LKE+FH L+MEE  KI DHLS LN I+ ELE+I ++IDDEDK LRLI SLP SYEHM+ +LMYGK+N+NF E TSKL+SEERRLK+ 
Subjt:  KMYQEKCISNRLNLKEQFHTLRMEECMKILDHLSNLNSIIFELEAIELKIDDEDKPLRLILSLPPSYEHMKPILMYGKDNLNFVEATSKLLSEERRLKSE

Query:  KRTSHEDSTLIARNWKNKDSVQKIKACCLGC
        +  S E   L     + K    K K  C GC
Subjt:  KRTSHEDSTLIARNWKNKDSVQKIKACCLGC
KAE8732867.1 hypothetical protein F3Y22_tig00001713pilonHSYRG00162 [Hibiscus syriacus]7.2e-3058.78Show/hide
Query:  KMYQEKCISNRLNLKEQFHTLRMEECMKILDHLSNLNSIIFELEAIELKIDDEDKPLRLILSLPPSYEHMKPILMYGKDNLNFVEATSKLLSEERRLKSE
        +MYQ K +SNRL LKE+FH L+MEE  KI DHLS LN I+ ELE+I + IDDEDK LRLI SLP SYEHM+ +LMYGK+N+NF E TSKL+SEERRLK+ 
Subjt:  KMYQEKCISNRLNLKEQFHTLRMEECMKILDHLSNLNSIIFELEAIELKIDDEDKPLRLILSLPPSYEHMKPILMYGKDNLNFVEATSKLLSEERRLKSE

Query:  KRTSHEDSTLIARNWKNKDSVQKIKACCLGC
        +  S E   L     + K    K K  C GC
Subjt:  KRTSHEDSTLIARNWKNKDSVQKIKACCLGC
KAE8736181.1 hypothetical protein F3Y22_tig00000132pilonHSYRG00093 [Hibiscus syriacus]4.2e-3058.78Show/hide
Query:  KMYQEKCISNRLNLKEQFHTLRMEECMKILDHLSNLNSIIFELEAIELKIDDEDKPLRLILSLPPSYEHMKPILMYGKDNLNFVEATSKLLSEERRLKSE
        +MYQ K +SNRL LKE+FH L+MEE  KI DHLS LN I+ ELE+I ++IDDEDK LRLI SLP SYEHM+ +LMYGK+N+NF E TSKL+SEERRLK+ 
Subjt:  KMYQEKCISNRLNLKEQFHTLRMEECMKILDHLSNLNSIIFELEAIELKIDDEDKPLRLILSLPPSYEHMKPILMYGKDNLNFVEATSKLLSEERRLKSE

Query:  KRTSHEDSTLIARNWKNKDSVQKIKACCLGC
        +  S E   L     + K    K K  C GC
Subjt:  KRTSHEDSTLIARNWKNKDSVQKIKACCLGC
KAF5758504.1 putative RNA-directed DNA polymerase [Helianthus annuus]3.2e-3062.99Show/hide
Query:  KMYQEKCISNRLNLKEQFHTLRMEECMKILDHLSNLNSIIFELEAIELKIDDEDKPLRLILSLPPSYEHMKPILMYGKDNLNFVEATSKLLSEERRLKSE
        ++YQ K ISNRL LKEQFHTLRM+   KI DHLS LN+I+ ELEAI +K++DEDK LRLILSL  SYEHMKPILMYGK+ L + + T KLLSEE+RL S 
Subjt:  KMYQEKCISNRLNLKEQFHTLRMEECMKILDHLSNLNSIIFELEAIELKIDDEDKPLRLILSLPPSYEHMKPILMYGKDNLNFVEATSKLLSEERRLKSE

Query:  KRTSHEDSTLIARNWKNKDSVQKIKAC
          TS E + LI  N K K   QKI  C
Subjt:  KRTSHEDSTLIARNWKNKDSVQKIKAC
XP_022139673.1 uncharacterized protein LOC111010521 [Momordica charantia]2.0e-4883.21Show/hide
Query:  MYQEKCISNRLNLKEQFHTLRMEECMKILDHLSNLNSIIFELEAIELKIDDEDKPLRLILSLPPSYEHMKPILMYGKDNLNFVEATSKLLSEERRLKSEK
        +YQ K ISNRL LKEQFHTL+MEE MKI DHLSNLNSIIFELEAIE+KIDDEDK LRLILSLP SYEHMKPILMYGKD LNF E TSKLLSEERRLKSE 
Subjt:  MYQEKCISNRLNLKEQFHTLRMEECMKILDHLSNLNSIIFELEAIELKIDDEDKPLRLILSLPPSYEHMKPILMYGKDNLNFVEATSKLLSEERRLKSEK

Query:  RTSHEDSTLIARNW-KNKDSVQKIKACCLGC
        RTSHEDS L+  NW K KDSVQK KACC GC
Subjt:  RTSHEDSTLIARNW-KNKDSVQKIKACCLGC
TrEMBL top hitse value%identityAlignment
A0A6A3BK59 CCHC-type domain-containing protein2.0e-3058.78Show/hide
Query:  KMYQEKCISNRLNLKEQFHTLRMEECMKILDHLSNLNSIIFELEAIELKIDDEDKPLRLILSLPPSYEHMKPILMYGKDNLNFVEATSKLLSEERRLKSE
        +MYQ K +SNRL LKE+FH L+MEE  KI DHLS LN I+ ELE+I ++IDDEDK LRLI SLP SYEHM+ +LMYGK+N+NF E TSKL+SEERRLK+ 
Subjt:  KMYQEKCISNRLNLKEQFHTLRMEECMKILDHLSNLNSIIFELEAIELKIDDEDKPLRLILSLPPSYEHMKPILMYGKDNLNFVEATSKLLSEERRLKSE

Query:  KRTSHEDSTLIARNWKNKDSVQKIKACCLGC
        +  S E   L     + K    K K  C GC
Subjt:  KRTSHEDSTLIARNWKNKDSVQKIKACCLGC
A0A6A3C6U5 G-type lectin S-receptor-like serine/threonine-protein kinase1.0e-2957.25Show/hide
Query:  KMYQEKCISNRLNLKEQFHTLRMEECMKILDHLSNLNSIIFELEAIELKIDDEDKPLRLILSLPPSYEHMKPILMYGKDNLNFVEATSKLLSEERRLKSE
        +MY+ K +SNRL LKE+FH L+MEE  KI DHLS LN I+ E+E+I ++IDDEDK LRLI SLP SYEHM+ +LMYGK+N+NF E TSKL+SEERRLK+ 
Subjt:  KMYQEKCISNRLNLKEQFHTLRMEECMKILDHLSNLNSIIFELEAIELKIDDEDKPLRLILSLPPSYEHMKPILMYGKDNLNFVEATSKLLSEERRLKSE

Query:  KRTSHEDSTLIARNWKNKDSVQKIKACCLGC
        +  S E   L     + K    K K  C GC
Subjt:  KRTSHEDSTLIARNWKNKDSVQKIKACCLGC
A0A6A3CWI3 CCHC-type domain-containing protein3.5e-3058.78Show/hide
Query:  KMYQEKCISNRLNLKEQFHTLRMEECMKILDHLSNLNSIIFELEAIELKIDDEDKPLRLILSLPPSYEHMKPILMYGKDNLNFVEATSKLLSEERRLKSE
        +MYQ K +SNRL LKE+FH L+MEE  KI DHLS LN I+ ELE+I + IDDEDK LRLI SLP SYEHM+ +LMYGK+N+NF E TSKL+SEERRLK+ 
Subjt:  KMYQEKCISNRLNLKEQFHTLRMEECMKILDHLSNLNSIIFELEAIELKIDDEDKPLRLILSLPPSYEHMKPILMYGKDNLNFVEATSKLLSEERRLKSE

Query:  KRTSHEDSTLIARNWKNKDSVQKIKACCLGC
        +  S E   L     + K    K K  C GC
Subjt:  KRTSHEDSTLIARNWKNKDSVQKIKACCLGC
A0A6A3DA47 CCHC-type domain-containing protein2.0e-3058.78Show/hide
Query:  KMYQEKCISNRLNLKEQFHTLRMEECMKILDHLSNLNSIIFELEAIELKIDDEDKPLRLILSLPPSYEHMKPILMYGKDNLNFVEATSKLLSEERRLKSE
        +MYQ K +SNRL LKE+FH L+MEE  KI DHLS LN I+ ELE+I ++IDDEDK LRLI SLP SYEHM+ +LMYGK+N+NF E TSKL+SEERRLK+ 
Subjt:  KMYQEKCISNRLNLKEQFHTLRMEECMKILDHLSNLNSIIFELEAIELKIDDEDKPLRLILSLPPSYEHMKPILMYGKDNLNFVEATSKLLSEERRLKSE

Query:  KRTSHEDSTLIARNWKNKDSVQKIKACCLGC
        +  S E   L     + K    K K  C GC
Subjt:  KRTSHEDSTLIARNWKNKDSVQKIKACCLGC
A0A6J1CG82 uncharacterized protein LOC1110105219.7e-4983.21Show/hide
Query:  MYQEKCISNRLNLKEQFHTLRMEECMKILDHLSNLNSIIFELEAIELKIDDEDKPLRLILSLPPSYEHMKPILMYGKDNLNFVEATSKLLSEERRLKSEK
        +YQ K ISNRL LKEQFHTL+MEE MKI DHLSNLNSIIFELEAIE+KIDDEDK LRLILSLP SYEHMKPILMYGKD LNF E TSKLLSEERRLKSE 
Subjt:  MYQEKCISNRLNLKEQFHTLRMEECMKILDHLSNLNSIIFELEAIELKIDDEDKPLRLILSLPPSYEHMKPILMYGKDNLNFVEATSKLLSEERRLKSEK

Query:  RTSHEDSTLIARNW-KNKDSVQKIKACCLGC
        RTSHEDS L+  NW K KDSVQK KACC GC
Subjt:  RTSHEDSTLIARNW-KNKDSVQKIKACCLGC
SwissProt top hitse value%identityAlignment
P04146 Copia protein1.4e-0427.12Show/hide
Query:  MYQEKCISNRLNLKEQFHTLRMEECMKILDHLSNLNSIIFELEAIELKIDDEDKPLRLILSLPPSYEH-MKPILMYGKDNLNFVEATSKLLSEERRLKSE
        +Y+ K ++++L L+++  +L++   M +L H    + +I EL A   KI++ DK   L+++LP  Y+  +  I    ++NL      ++LL +E ++K++
Subjt:  MYQEKCISNRLNLKEQFHTLRMEECMKILDHLSNLNSIIFELEAIELKIDDEDKPLRLILSLPPSYEH-MKPILMYGKDNLNFVEATSKLLSEERRLKSE

Query:  KR-TSHEDSTLIARNWKN
           TS +    I  N  N
Subjt:  KR-TSHEDSTLIARNWKN
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.0e-1134.55Show/hide
Query:  MYQEKCISNRLNLKEQFHTLRMEECMKILDHLSNLNSIIFELEAIELKIDDEDKPLRLILSLPPSYEHMKPILMYGKDNLNFVEATSKLLSEERRLKSEK
        +Y  K ++N+L LK+Q + L M E    L HL+  N +I +L  + +KI++EDK + L+ SLP SY+++   +++GK  +   + TS LL  E   K  K
Subjt:  MYQEKCISNRLNLKEQFHTLRMEECMKILDHLSNLNSIIFELEAIELKIDDEDKPLRLILSLPPSYEHMKPILMYGKDNLNFVEATSKLLSEERRLKSEK

Query:  RTSHEDSTLI
        +  ++   LI
Subjt:  RTSHEDSTLI
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATTATTTATGAGCCCAGTGAAGATTGATGTGAAGAAATTTGACGGAATGATCAACTTCGACTTTCGCAACTGCAAGTCAAAGATGTATCAGGAAAAATGCATCTC
AAATCGGTTGAACTTGAAGGAGCAGTTTCACACACTGCGAATGGAGGAATGTATGAAAATTTTAGATCATCTAAGTAATCTCAATAGCATTATCTTTGAGCTGGAGGCAA
TCGAATTGAAGATAGATGACGAAGATAAGCCACTCAGACTCATCTTGTCACTTCCACCTTCTTATGAACACATGAAGCCGATTTTGATGTATGGAAAGGATAATTTGAAT
TTTGTCGAGGCTACTAGTAAACTATTGTCAGAAGAAAGAAGACTGAAGAGTGAAAAACGTACTTCACATGAAGATTCAACACTGATAGCTAGAAATTGGAAGAATAAAGA
CTCCGTGCAAAAGATCAAAGCTTGTTGTTTGGGATGCGACAATCTGGACAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCATTATTTATGAGCCCAGTGAAGATTGATGTGAAGAAATTTGACGGAATGATCAACTTCGACTTTCGCAACTGCAAGTCAAAGATGTATCAGGAAAAATGCATCTC
AAATCGGTTGAACTTGAAGGAGCAGTTTCACACACTGCGAATGGAGGAATGTATGAAAATTTTAGATCATCTAAGTAATCTCAATAGCATTATCTTTGAGCTGGAGGCAA
TCGAATTGAAGATAGATGACGAAGATAAGCCACTCAGACTCATCTTGTCACTTCCACCTTCTTATGAACACATGAAGCCGATTTTGATGTATGGAAAGGATAATTTGAAT
TTTGTCGAGGCTACTAGTAAACTATTGTCAGAAGAAAGAAGACTGAAGAGTGAAAAACGTACTTCACATGAAGATTCAACACTGATAGCTAGAAATTGGAAGAATAAAGA
CTCCGTGCAAAAGATCAAAGCTTGTTGTTTGGGATGCGACAATCTGGACAGATGA
Protein sequenceShow/hide protein sequence
MSLFMSPVKIDVKKFDGMINFDFRNCKSKMYQEKCISNRLNLKEQFHTLRMEECMKILDHLSNLNSIIFELEAIELKIDDEDKPLRLILSLPPSYEHMKPILMYGKDNLN
FVEATSKLLSEERRLKSEKRTSHEDSTLIARNWKNKDSVQKIKACCLGCDNLDR