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Moc09g09890 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g09890
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptioneukaryotic translation initiation factor 3 subunit C-like
Genome locationchr9:8354101..8356477
RNA-Seq ExpressionMoc09g09890
SyntenyMoc09g09890
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022141935.1 eukaryotic translation initiation factor 3 subunit C-like [Momordica charantia]5.8e-1765.38Show/hide
Query:  MDITEAHTLKKTPDKWSKRSKTEIEEPVKKKKDQPSKTKGDNEKVKEKKKTKKNHKRPNEKNEDVQKSNDRESPDDNESSDEYKMNYRNNKEESMIESEE
        MD  +A   KKTPDK SKR KTE EE VKK+KDQPSKTKG++EKV EKKK K+N+   ++K EDVQ+SND ES DDNESSDEYK+N  +++EESM ES+E
Subjt:  MDITEAHTLKKTPDKWSKRSKTEIEEPVKKKKDQPSKTKGDNEKVKEKKKTKKNHKRPNEKNEDVQKSNDRESPDDNESSDEYKMNYRNNKEESMIESEE

Query:  IVNK
        IV++
Subjt:  IVNK
TrEMBL top hitse value%identityAlignment
A0A6J1CJI4 eukaryotic translation initiation factor 3 subunit C-like2.8e-1765.38Show/hide
Query:  MDITEAHTLKKTPDKWSKRSKTEIEEPVKKKKDQPSKTKGDNEKVKEKKKTKKNHKRPNEKNEDVQKSNDRESPDDNESSDEYKMNYRNNKEESMIESEE
        MD  +A   KKTPDK SKR KTE EE VKK+KDQPSKTKG++EKV EKKK K+N+   ++K EDVQ+SND ES DDNESSDEYK+N  +++EESM ES+E
Subjt:  MDITEAHTLKKTPDKWSKRSKTEIEEPVKKKKDQPSKTKGDNEKVKEKKKTKKNHKRPNEKNEDVQKSNDRESPDDNESSDEYKMNYRNNKEESMIESEE

Query:  IVNK
        IV++
Subjt:  IVNK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACATTACAGAGGCACATACACTTAAAAAGACGCCGGACAAATGGTCAAAACGTAGCAAAACAGAAATCGAAGAACCGGTGAAAAAAAAGAAAGATCAACCGAGTAA
AACAAAAGGGGATAATGAAAAGGTTAAGGAAAAGAAGAAAACCAAGAAGAACCATAAGCGACCAAATGAAAAGAACGAGGATGTTCAAAAGTCAAATGACAGGGAATCAC
CCGATGATAACGAATCTTCAGACGAATACAAAATGAACTACCGCAACAATAAGGAAGAATCAATGATCGAATCAGAAGAGATAGTTAACAAGAATGCACCTAAAGATGAT
ATGGTGAAGATGGTCTTGCTTTATTGTTTAAAGGAGTTTTCTTTTACCACATCAAGACTCGCTTCATGTAGAGATGAACCACATCCTAATGCTAGAGTTGGTGTGCCAAT
GGAGCCCTTCGAAGAGGAACTAACCATGCCATATAAGGTATCATTCCTCGAAGAGATAGATGGAACAGTGATGGGAGGTCTCCAAGCCCTACCATTTGAGACTGCAATAG
GGAAGCTTGATGGCATTATGACAAACTTAAATCTGATTCTTTGCCAATTGAATACAAGTGCTGGATTGAAGGGTGATAGGCTCAGTAGGGGACATCATTATTCACCAATG
ACCTTGAGACTCTGGATGCTAAAAAAAGATAAGGAAAAGAATGACAATCCAGTTGATGATCACTACCAAGAAAAAACCTCAACCGTACAGAGGAAAGATGATGAAGAGGA
CCATATAGGTGGACAAAGACAACAACACCCTGCAGTTGAGCAATGTGTCCAGACGGGTGCCACCCCGAAAATTGGTGCAAGAAAGGTCTTTGAAAAAGAAAGCACTCGAG
ACAAAACTCAGGCATGTGATGGACTTGATGATATTGATGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGACATTACAGAGGCACATACACTTAAAAAGACGCCGGACAAATGGTCAAAACGTAGCAAAACAGAAATCGAAGAACCGGTGAAAAAAAAGAAAGATCAACCGAGTAA
AACAAAAGGGGATAATGAAAAGGTTAAGGAAAAGAAGAAAACCAAGAAGAACCATAAGCGACCAAATGAAAAGAACGAGGATGTTCAAAAGTCAAATGACAGGGAATCAC
CCGATGATAACGAATCTTCAGACGAATACAAAATGAACTACCGCAACAATAAGGAAGAATCAATGATCGAATCAGAAGAGATAGTTAACAAGAATGCACCTAAAGATGAT
ATGGTGAAGATGGTCTTGCTTTATTGTTTAAAGGAGTTTTCTTTTACCACATCAAGACTCGCTTCATGTAGAGATGAACCACATCCTAATGCTAGAGTTGGTGTGCCAAT
GGAGCCCTTCGAAGAGGAACTAACCATGCCATATAAGGTATCATTCCTCGAAGAGATAGATGGAACAGTGATGGGAGGTCTCCAAGCCCTACCATTTGAGACTGCAATAG
GGAAGCTTGATGGCATTATGACAAACTTAAATCTGATTCTTTGCCAATTGAATACAAGTGCTGGATTGAAGGGTGATAGGCTCAGTAGGGGACATCATTATTCACCAATG
ACCTTGAGACTCTGGATGCTAAAAAAAGATAAGGAAAAGAATGACAATCCAGTTGATGATCACTACCAAGAAAAAACCTCAACCGTACAGAGGAAAGATGATGAAGAGGA
CCATATAGGTGGACAAAGACAACAACACCCTGCAGTTGAGCAATGTGTCCAGACGGGTGCCACCCCGAAAATTGGTGCAAGAAAGGTCTTTGAAAAAGAAAGCACTCGAG
ACAAAACTCAGGCATGTGATGGACTTGATGATATTGATGAATGA
Protein sequenceShow/hide protein sequence
MDITEAHTLKKTPDKWSKRSKTEIEEPVKKKKDQPSKTKGDNEKVKEKKKTKKNHKRPNEKNEDVQKSNDRESPDDNESSDEYKMNYRNNKEESMIESEEIVNKNAPKDD
MVKMVLLYCLKEFSFTTSRLASCRDEPHPNARVGVPMEPFEEELTMPYKVSFLEEIDGTVMGGLQALPFETAIGKLDGIMTNLNLILCQLNTSAGLKGDRLSRGHHYSPM
TLRLWMLKKDKEKNDNPVDDHYQEKTSTVQRKDDEEDHIGGQRQQHPAVEQCVQTGATPKIGARKVFEKESTRDKTQACDGLDDIDE