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Moc09g09910 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g09910
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr9:8383548..8385112
RNA-Seq ExpressionMoc09g09910
SyntenyMoc09g09910
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144016.1 uncharacterized protein LOC111013805 [Momordica charantia]8.7e-1929.8Show/hide
Query:  RQLYVNIPLVEVLEQIPNYVKFLEDILAKEKKLGEYEIVMLTKECNNDKQDTI--KHEDLRSFTIPISIG------------------------------
        +QL+VN+PLVE LEQ+PNYV+FL++IL K++ LGEYEIV +TK C+      I  K +D  SFTIP+SIG                              
Subjt:  RQLYVNIPLVEVLEQIPNYVKFLEDILAKEKKLGEYEIVMLTKECNNDKQDTI--KHEDLRSFTIPISIG------------------------------

Query:  ------------------------------------------------------------GKALVDVHRRELTMRVQDQEITFYVFDSMRYPADTKECLV
                                                                    G+ALVDV++ ELTM VQDQE+ F V +SM++ A+++EC V
Subjt:  ------------------------------------------------------------GKALVDVHRRELTMRVQDQEITFYVFDSMRYPADTKECLV

Query:  VHLANDLFVDNLSQELLLEYIQNGGAMTQEDASMDHLSKLAAALL
        + + ++  ++ L  E++LE ++  GA +  +A  + L  + +  L
Subjt:  VHLANDLFVDNLSQELLLEYIQNGGAMTQEDASMDHLSKLAAALL

XP_022156989.1 uncharacterized protein LOC111023818 [Momordica charantia]4.3e-1831.39Show/hide
Query:  RQLYVNIPLVEVLEQIPNYVKFLEDILAKEKKLGEYEIVMLTKECNNDKQDTI--KHEDLRSFTIPISIGGK----------------------------
        +QL++NIPL+E LEQ+PNYVKFL+DILAK+++LGE+EIV LTKE +      +  K  D  SFTIP+ IGGK                            
Subjt:  RQLYVNIPLVEVLEQIPNYVKFLEDILAKEKKLGEYEIVMLTKECNNDKQDTI--KHEDLRSFTIPISIGGK----------------------------

Query:  --------------------------------------------------------------ALVDVHRRELTMRVQDQEITFYVFDSMRYPADTKECLV
                                                                      AL+DVH  ELT+RV DQ++T  +F+S++YP D +EC  
Subjt:  --------------------------------------------------------------ALVDVHRRELTMRVQDQEITFYVFDSMRYPADTKECLV

Query:  VHLANDLFVDNLSQELLLEYIQN
        + +A+DL  D +  E LL  +++
Subjt:  VHLANDLFVDNLSQELLLEYIQN

XP_022158993.1 uncharacterized protein LOC111025437 [Momordica charantia]4.3e-1837.42Show/hide
Query:  NYVKFLEDILAKEKKLGEYEIVMLTKECNNDKQDTI--KHEDLRSFTIPISIGG-----------------------------------------KALVD
        NYV+FL++IL K++KLGEYE V + K C+N     I  K +D RSFTIP+SIGG                                         + LVD
Subjt:  NYVKFLEDILAKEKKLGEYEIVMLTKECNNDKQDTI--KHEDLRSFTIPISIGG-----------------------------------------KALVD

Query:  VHRRELTMRVQDQEITFYVFDSMRYPADTKECLVVHLANDLFVDNLSQELLLEYI
        VH+  LTMRVQDQE+ F V+DSM++P ++KEC V+ + ++  ++ L  E +L+++
Subjt:  VHRRELTMRVQDQEITFYVFDSMRYPADTKECLVVHLANDLFVDNLSQELLLEYI

XP_022159043.1 uncharacterized protein LOC111025484 [Momordica charantia]3.9e-1942.66Show/hide
Query:  IPNYVKFLEDILAKEKKLGEYEIVMLTKECNNDKQDTI--KHEDLRSFTIPISIGG----------------------------KALVDVHRRELTMRVQ
        +PNYVKFLE+IL K++KLGEYE V +TK C+      I  K +D  SFTI +SIGG                            +ALVDV++ ELTM VQ
Subjt:  IPNYVKFLEDILAKEKKLGEYEIVMLTKECNNDKQDTI--KHEDLRSFTIPISIGG----------------------------KALVDVHRRELTMRVQ

Query:  DQEITFYVFDSMRYPADTKECLVVHLANDLFVDNLSQELLLEY
        DQE+ F V+DSM++PA+++E  V+ + ++  V+ LS E +LE+
Subjt:  DQEITFYVFDSMRYPADTKECLVVHLANDLFVDNLSQELLLEY

XP_024027316.1 uncharacterized protein LOC112093341 [Morus notabilis]3.9e-1936.93Show/hide
Query:  RQLYVNIPLVEVLEQIPNYVKFLEDILAKEKKLGEYEIVMLTKECNNDKQDTI--KHEDLRSFTIPISIG------------------------------
        +QL++NIPLVE LEQ+PNYVKF++DIL+K+++LGE+E+V LT+E N   ++ +  K +D  SFTIP SIG                              
Subjt:  RQLYVNIPLVEVLEQIPNYVKFLEDILAKEKKLGEYEIVMLTKECNNDKQDTI--KHEDLRSFTIPISIG------------------------------

Query:  -------------GKALVDVHRRELTMRVQDQEITFYVFDSMRYPADTKECLVVHLANDL----FVDNLSQELLLE
                     G  L+DV + ELTMRV DQ++TF VF +MR+  + +EC  +++ + L    F    S++L+ E
Subjt:  -------------GKALVDVHRRELTMRVQDQEITFYVFDSMRYPADTKECLVVHLANDL----FVDNLSQELLLE

TrEMBL top hitse value%identityAlignment
A0A6J1CS22 uncharacterized protein LOC1110138054.2e-1929.8Show/hide
Query:  RQLYVNIPLVEVLEQIPNYVKFLEDILAKEKKLGEYEIVMLTKECNNDKQDTI--KHEDLRSFTIPISIG------------------------------
        +QL+VN+PLVE LEQ+PNYV+FL++IL K++ LGEYEIV +TK C+      I  K +D  SFTIP+SIG                              
Subjt:  RQLYVNIPLVEVLEQIPNYVKFLEDILAKEKKLGEYEIVMLTKECNNDKQDTI--KHEDLRSFTIPISIG------------------------------

Query:  ------------------------------------------------------------GKALVDVHRRELTMRVQDQEITFYVFDSMRYPADTKECLV
                                                                    G+ALVDV++ ELTM VQDQE+ F V +SM++ A+++EC V
Subjt:  ------------------------------------------------------------GKALVDVHRRELTMRVQDQEITFYVFDSMRYPADTKECLV

Query:  VHLANDLFVDNLSQELLLEYIQNGGAMTQEDASMDHLSKLAAALL
        + + ++  ++ L  E++LE ++  GA +  +A  + L  + +  L
Subjt:  VHLANDLFVDNLSQELLLEYIQNGGAMTQEDASMDHLSKLAAALL

A0A6J1DV77 uncharacterized protein LOC1110238182.1e-1831.39Show/hide
Query:  RQLYVNIPLVEVLEQIPNYVKFLEDILAKEKKLGEYEIVMLTKECNNDKQDTI--KHEDLRSFTIPISIGGK----------------------------
        +QL++NIPL+E LEQ+PNYVKFL+DILAK+++LGE+EIV LTKE +      +  K  D  SFTIP+ IGGK                            
Subjt:  RQLYVNIPLVEVLEQIPNYVKFLEDILAKEKKLGEYEIVMLTKECNNDKQDTI--KHEDLRSFTIPISIGGK----------------------------

Query:  --------------------------------------------------------------ALVDVHRRELTMRVQDQEITFYVFDSMRYPADTKECLV
                                                                      AL+DVH  ELT+RV DQ++T  +F+S++YP D +EC  
Subjt:  --------------------------------------------------------------ALVDVHRRELTMRVQDQEITFYVFDSMRYPADTKECLV

Query:  VHLANDLFVDNLSQELLLEYIQN
        + +A+DL  D +  E LL  +++
Subjt:  VHLANDLFVDNLSQELLLEYIQN

A0A6J1DXL0 uncharacterized protein LOC1110254372.1e-1837.42Show/hide
Query:  NYVKFLEDILAKEKKLGEYEIVMLTKECNNDKQDTI--KHEDLRSFTIPISIGG-----------------------------------------KALVD
        NYV+FL++IL K++KLGEYE V + K C+N     I  K +D RSFTIP+SIGG                                         + LVD
Subjt:  NYVKFLEDILAKEKKLGEYEIVMLTKECNNDKQDTI--KHEDLRSFTIPISIGG-----------------------------------------KALVD

Query:  VHRRELTMRVQDQEITFYVFDSMRYPADTKECLVVHLANDLFVDNLSQELLLEYI
        VH+  LTMRVQDQE+ F V+DSM++P ++KEC V+ + ++  ++ L  E +L+++
Subjt:  VHRRELTMRVQDQEITFYVFDSMRYPADTKECLVVHLANDLFVDNLSQELLLEYI

A0A6J1DXQ8 uncharacterized protein LOC1110254841.9e-1942.66Show/hide
Query:  IPNYVKFLEDILAKEKKLGEYEIVMLTKECNNDKQDTI--KHEDLRSFTIPISIGG----------------------------KALVDVHRRELTMRVQ
        +PNYVKFLE+IL K++KLGEYE V +TK C+      I  K +D  SFTI +SIGG                            +ALVDV++ ELTM VQ
Subjt:  IPNYVKFLEDILAKEKKLGEYEIVMLTKECNNDKQDTI--KHEDLRSFTIPISIGG----------------------------KALVDVHRRELTMRVQ

Query:  DQEITFYVFDSMRYPADTKECLVVHLANDLFVDNLSQELLLEY
        DQE+ F V+DSM++PA+++E  V+ + ++  V+ LS E +LE+
Subjt:  DQEITFYVFDSMRYPADTKECLVVHLANDLFVDNLSQELLLEY

A0A6P4Q2K8 uncharacterized protein LOC1084851604.7e-1835.33Show/hide
Query:  RQLYVNIPLVEVLEQIPNYVKFLEDILAKEKKLGEYEIVMLTKECNNDKQDTI--KHEDLRSFTIPISIG----------------------------GK
        +QL++NIPLV+ LEQ+P+YVKF++DIL+K+++LGE++   L K C       +  K +D RSFTIP SIG                             +
Subjt:  RQLYVNIPLVEVLEQIPNYVKFLEDILAKEKKLGEYEIVMLTKECNNDKQDTI--KHEDLRSFTIPISIG----------------------------GK

Query:  ALVDVHRRELTMRVQDQEITFYVFDSMRYPADTKECLVVHLANDLFVDNLSQELLLEYIQNGGAMTQEDASMDHLSK-LAAALL
         L+DV + ELTMRV DQ++TF VF++++   + +EC  + L   L VD  ++     +        Q D   + L K L AAL+
Subjt:  ALVDVHRRELTMRVQDQEITFYVFDSMRYPADTKECLVVHLANDLFVDNLSQELLLEYIQNGGAMTQEDASMDHLSK-LAAALL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGGAGAATTTGGGTCTGAGCAGCAGAAAATCAGAAGCAGCTAGAGGCAGAATCGAAGGTTGCACCAGTAGACAACTCTATGTCAACATCCCGTTGGTGGAGGTGCT
CGAGCAAATACCAAACTATGTCAAGTTTTTAGAGGACATCTTGGCAAAGGAGAAAAAGTTGGGAGAATATGAGATTGTAATGCTTACAAAGGAGTGCAACAATGACAAGC
AAGATACCATAAAACATGAAGACCTTAGGAGCTTCACAATCCCAATATCAATAGGAGGGAAAGCTCTAGTAGACGTGCACAGGAGAGAACTGACTATGAGAGTACAAGAT
CAAGAGATTACGTTTTATGTGTTTGATTCGATGAGGTATCCTGCTGATACAAAAGAATGTTTAGTTGTACATTTAGCTAATGATTTGTTTGTTGATAACCTGAGCCAAGA
ACTGTTGCTGGAGTACATTCAAAATGGAGGAGCTATGACTCAAGAAGATGCCAGTATGGATCACCTCTCCAAACTTGCTGCTGCACTCCTGAAGCAGAGACTATGGAGAT
CAAAGATTCATTTGCCGATGAGCAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCGGAGAATTTGGGTCTGAGCAGCAGAAAATCAGAAGCAGCTAGAGGCAGAATCGAAGGTTGCACCAGTAGACAACTCTATGTCAACATCCCGTTGGTGGAGGTGCT
CGAGCAAATACCAAACTATGTCAAGTTTTTAGAGGACATCTTGGCAAAGGAGAAAAAGTTGGGAGAATATGAGATTGTAATGCTTACAAAGGAGTGCAACAATGACAAGC
AAGATACCATAAAACATGAAGACCTTAGGAGCTTCACAATCCCAATATCAATAGGAGGGAAAGCTCTAGTAGACGTGCACAGGAGAGAACTGACTATGAGAGTACAAGAT
CAAGAGATTACGTTTTATGTGTTTGATTCGATGAGGTATCCTGCTGATACAAAAGAATGTTTAGTTGTACATTTAGCTAATGATTTGTTTGTTGATAACCTGAGCCAAGA
ACTGTTGCTGGAGTACATTCAAAATGGAGGAGCTATGACTCAAGAAGATGCCAGTATGGATCACCTCTCCAAACTTGCTGCTGCACTCCTGAAGCAGAGACTATGGAGAT
CAAAGATTCATTTGCCGATGAGCAATTAA
Protein sequenceShow/hide protein sequence
MPENLGLSSRKSEAARGRIEGCTSRQLYVNIPLVEVLEQIPNYVKFLEDILAKEKKLGEYEIVMLTKECNNDKQDTIKHEDLRSFTIPISIGGKALVDVHRRELTMRVQD
QEITFYVFDSMRYPADTKECLVVHLANDLFVDNLSQELLLEYIQNGGAMTQEDASMDHLSKLAAALLKQRLWRSKIHLPMSN