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Moc09g09980 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g09980
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionTransposon TX1 uncharacterized
Genome locationchr9:8450184..8453245
RNA-Seq ExpressionMoc09g09980
SyntenyMoc09g09980
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022159051.1 uncharacterized protein LOC111025493 [Momordica charantia]2.1e-0750Show/hide
Query:  LKNEKKKEEKEELIINDISSLDLLEECFGLSFGEQDKRCALQNDLLNIYIKEERTLIQKCKV
        +  + +K+ K   I+ DIS+LD+  +CFGLS  +++ R +LQ DLLN+YIKEER LIQ+CK+
Subjt:  LKNEKKKEEKEELIINDISSLDLLEECFGLSFGEQDKRCALQNDLLNIYIKEERTLIQKCKV
XP_038884535.1 DEAD-box ATP-dependent RNA helicase FANCM isoform X1 [Benincasa hispida]1.8e-0640.96Show/hide
Query:  AGFALSSKLRNLKAPLKQWHLKNEKKKEEKEELIINDISSLDLLEECFGLSFGEQDKRCALQNDLLNIYIKEERTLIQKCKVH
        AGFAL S+LR +K  +K+W  ++EK ++ +EE ++ +I   DL  +       E+D R +L+ DLL++Y  EER LIQK K++
Subjt:  AGFALSSKLRNLKAPLKQWHLKNEKKKEEKEELIINDISSLDLLEECFGLSFGEQDKRCALQNDLLNIYIKEERTLIQKCKVH
XP_038884536.1 DEAD-box ATP-dependent RNA helicase FANCM isoform X2 [Benincasa hispida]1.8e-0640.96Show/hide
Query:  AGFALSSKLRNLKAPLKQWHLKNEKKKEEKEELIINDISSLDLLEECFGLSFGEQDKRCALQNDLLNIYIKEERTLIQKCKVH
        AGFAL S+LR +K  +K+W  ++EK ++ +EE ++ +I   DL  +       E+D R +L+ DLL++Y  EER LIQK K++
Subjt:  AGFALSSKLRNLKAPLKQWHLKNEKKKEEKEELIINDISSLDLLEECFGLSFGEQDKRCALQNDLLNIYIKEERTLIQKCKVH
XP_038884537.1 DEAD-box ATP-dependent RNA helicase FANCM isoform X3 [Benincasa hispida]1.8e-0640.96Show/hide
Query:  AGFALSSKLRNLKAPLKQWHLKNEKKKEEKEELIINDISSLDLLEECFGLSFGEQDKRCALQNDLLNIYIKEERTLIQKCKVH
        AGFAL S+LR +K  +K+W  ++EK ++ +EE ++ +I   DL  +       E+D R +L+ DLL++Y  EER LIQK K++
Subjt:  AGFALSSKLRNLKAPLKQWHLKNEKKKEEKEELIINDISSLDLLEECFGLSFGEQDKRCALQNDLLNIYIKEERTLIQKCKVH
XP_038889274.1 uncharacterized protein LOC120079176 [Benincasa hispida]1.5e-0539.08Show/hide
Query:  LSPEANARAGFALSSKLRNLKAPLKQWHLKNEKKKEEKEELIINDISSLDLLEECFGLSFGEQDKRCALQNDLLNIYIKEERTLIQK
        LS EA    GF+L+ KL+ +K  +K+WH K ++ +  KEE ++ +I   D L +C  LS  E   R  L+ DL+++Y  +E  LIQK
Subjt:  LSPEANARAGFALSSKLRNLKAPLKQWHLKNEKKKEEKEELIINDISSLDLLEECFGLSFGEQDKRCALQNDLLNIYIKEERTLIQK
TrEMBL top hitse value%identityAlignment
A0A151QYX4 Transposon TX1 uncharacterized4.0e-0437.5Show/hide
Query:  FALSSKLRNLKAPLKQWHLKNEKKKEEKEELIINDISSLDLLEECFGLSFGEQDKRCALQNDLLNIYIKEERTLIQKCKV
        + L  KLR LK+ LK W+L++ +  +  ++ I+ D++ LD  EE  GLS  E  KR  LQN+   + I+ E  L Q+ +V
Subjt:  FALSSKLRNLKAPLKQWHLKNEKKKEEKEELIINDISSLDLLEECFGLSFGEQDKRCALQNDLLNIYIKEERTLIQKCKV
A0A6J1E2R6 uncharacterized protein LOC1110254931.0e-0750Show/hide
Query:  LKNEKKKEEKEELIINDISSLDLLEECFGLSFGEQDKRCALQNDLLNIYIKEERTLIQKCKV
        +  + +K+ K   I+ DIS+LD+  +CFGLS  +++ R +LQ DLLN+YIKEER LIQ+CK+
Subjt:  LKNEKKKEEKEELIINDISSLDLLEECFGLSFGEQDKRCALQNDLLNIYIKEERTLIQKCKV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATGGTGCGCGAAGGTGCCCAAAGGCGCTCGCCTGGGCACCTTGCAAGGCGCACCTGGGCGAAAACGCCTTGCCTCTCGCCTGAGGCGAACGCCCGGGCTGGATT
TGCCCTTTCTTCCAAGCTAAGAAATCTAAAGGCACCTCTTAAACAGTGGCATTTGAAGAATGAAAAGAAGAAAGAGGAGAAAGAGGAATTGATCATCAATGATATATCCT
CCCTTGATCTCTTAGAAGAATGTTTTGGCTTATCTTTCGGTGAACAAGATAAGCGTTGTGCCCTTCAAAATGACCTTCTCAATATTTATATTAAGGAAGAGAGGACTTTG
ATTCAGAAGTGCAAAGTTCACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGATGGTGCGCGAAGGTGCCCAAAGGCGCTCGCCTGGGCACCTTGCAAGGCGCACCTGGGCGAAAACGCCTTGCCTCTCGCCTGAGGCGAACGCCCGGGCTGGATT
TGCCCTTTCTTCCAAGCTAAGAAATCTAAAGGCACCTCTTAAACAGTGGCATTTGAAGAATGAAAAGAAGAAAGAGGAGAAAGAGGAATTGATCATCAATGATATATCCT
CCCTTGATCTCTTAGAAGAATGTTTTGGCTTATCTTTCGGTGAACAAGATAAGCGTTGTGCCCTTCAAAATGACCTTCTCAATATTTATATTAAGGAAGAGAGGACTTTG
ATTCAGAAGTGCAAAGTTCACTAG
Protein sequenceShow/hide protein sequence
MAMVREGAQRRSPGHLARRTWAKTPCLSPEANARAGFALSSKLRNLKAPLKQWHLKNEKKKEEKEELIINDISSLDLLEECFGLSFGEQDKRCALQNDLLNIYIKEERTL
IQKCKVH