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Moc09g10090 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g10090
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr9:8544399..8551525
RNA-Seq ExpressionMoc09g10090
SyntenyMoc09g10090
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154103.1 uncharacterized protein LOC111021439 [Momordica charantia]2.8e-2280.82Show/hide
Query:  QTDLGRTASVEILPEPSIEAQEVMDIDEQGQPEENWTSHLIKYLRDGILPKEKIEAQQLQRRVARYVLKDENL
        +TDLGRT  VEIL  PSIEAQE MDID+QGQPEENW S LIKYL+DGILP EKIEAQQLQ+R ARYVLKD+NL
Subjt:  QTDLGRTASVEILPEPSIEAQEVMDIDEQGQPEENWTSHLIKYLRDGILPKEKIEAQQLQRRVARYVLKDENL

XP_022155342.1 uncharacterized protein LOC111022476 [Momordica charantia]3.9e-2450.68Show/hide
Query:  QTDLGRTASVEILPEPSIEAQEVMDIDEQGQPEENWTSHLIKYLRDGILPKEKIEAQQLQRRVARYVLKDENLSFNFEMRKLNLSFLKKKMYSKKEWFEL
        +TDL RT  VEILPEPSIEA E MDIDEQGQPE+NW SHLIKYLRDGILP EKIEAQQLQRR  RY+LKD+NL      R  +L  LK     + ++  +
Subjt:  QTDLGRTASVEILPEPSIEAQEVMDIDEQGQPEENWTSHLIKYLRDGILPKEKIEAQQLQRRVARYVLKDENLSFNFEMRKLNLSFLKKKMYSKKEWFEL

Query:  HNVSVGLLYPRGGQRIPTAPVV---VAYVLTNKNPKKIGTENMSVEEF
          +  G+     G R  +  +V   + Y + + N K+ G  N +  EF
Subjt:  HNVSVGLLYPRGGQRIPTAPVV---VAYVLTNKNPKKIGTENMSVEEF

XP_022156571.1 uncharacterized protein LOC111023448 [Momordica charantia]2.8e-2282.19Show/hide
Query:  QTDLGRTASVEILPEPSIEAQEVMDIDEQGQPEENWTSHLIKYLRDGILPKEKIEAQQLQRRVARYVLKDENL
        +TDLGRT  VEILPEPSIEAQE MDID QGQ EEN  S LIKYL+DGILP EKIEAQQLQRR ARYVLKD+NL
Subjt:  QTDLGRTASVEILPEPSIEAQEVMDIDEQGQPEENWTSHLIKYLRDGILPKEKIEAQQLQRRVARYVLKDENL

XP_022158579.1 uncharacterized protein LOC111025033 [Momordica charantia]8.8e-2478.21Show/hide
Query:  MSMQTQTDLGRTASVEILPEPSIEAQEVMDIDEQGQPEENWTSHLIKYLRDGILPKEKIEAQQLQRRVARYVLKDENL
        +++  +TDLGRT  VEILP PSIEAQE MDID QGQPEENW S LIKYL+DGILP EKIEAQQLQRR ARYVLKD+NL
Subjt:  MSMQTQTDLGRTASVEILPEPSIEAQEVMDIDEQGQPEENWTSHLIKYLRDGILPKEKIEAQQLQRRVARYVLKDENL

XP_022159204.1 uncharacterized protein LOC111025623 [Momordica charantia]4.1e-2180.56Show/hide
Query:  TDLGRTASVEILPEPSIEAQEVMDIDEQGQPEENWTSHLIKYLRDGILPKEKIEAQQLQRRVARYVLKDENL
        TDLGRT SVEIL EPSI+AQE MDIDEQ Q EENW SHLIKYL+DGILP E IE QQLQR+ ARYVLKDE+L
Subjt:  TDLGRTASVEILPEPSIEAQEVMDIDEQGQPEENWTSHLIKYLRDGILPKEKIEAQQLQRRVARYVLKDENL

TrEMBL top hitse value%identityAlignment
A0A6J1DJC7 Ribonuclease H1.4e-2280.82Show/hide
Query:  QTDLGRTASVEILPEPSIEAQEVMDIDEQGQPEENWTSHLIKYLRDGILPKEKIEAQQLQRRVARYVLKDENL
        +TDLGRT  VEIL  PSIEAQE MDID+QGQPEENW S LIKYL+DGILP EKIEAQQLQ+R ARYVLKD+NL
Subjt:  QTDLGRTASVEILPEPSIEAQEVMDIDEQGQPEENWTSHLIKYLRDGILPKEKIEAQQLQRRVARYVLKDENL

A0A6J1DP30 uncharacterized protein LOC1110224761.9e-2450.68Show/hide
Query:  QTDLGRTASVEILPEPSIEAQEVMDIDEQGQPEENWTSHLIKYLRDGILPKEKIEAQQLQRRVARYVLKDENLSFNFEMRKLNLSFLKKKMYSKKEWFEL
        +TDL RT  VEILPEPSIEA E MDIDEQGQPE+NW SHLIKYLRDGILP EKIEAQQLQRR  RY+LKD+NL      R  +L  LK     + ++  +
Subjt:  QTDLGRTASVEILPEPSIEAQEVMDIDEQGQPEENWTSHLIKYLRDGILPKEKIEAQQLQRRVARYVLKDENLSFNFEMRKLNLSFLKKKMYSKKEWFEL

Query:  HNVSVGLLYPRGGQRIPTAPVV---VAYVLTNKNPKKIGTENMSVEEF
          +  G+     G R  +  +V   + Y + + N K+ G  N +  EF
Subjt:  HNVSVGLLYPRGGQRIPTAPVV---VAYVLTNKNPKKIGTENMSVEEF

A0A6J1DVC6 Ribonuclease H1.4e-2282.19Show/hide
Query:  QTDLGRTASVEILPEPSIEAQEVMDIDEQGQPEENWTSHLIKYLRDGILPKEKIEAQQLQRRVARYVLKDENL
        +TDLGRT  VEILPEPSIEAQE MDID QGQ EEN  S LIKYL+DGILP EKIEAQQLQRR ARYVLKD+NL
Subjt:  QTDLGRTASVEILPEPSIEAQEVMDIDEQGQPEENWTSHLIKYLRDGILPKEKIEAQQLQRRVARYVLKDENL

A0A6J1DZU0 Ribonuclease H4.2e-2478.21Show/hide
Query:  MSMQTQTDLGRTASVEILPEPSIEAQEVMDIDEQGQPEENWTSHLIKYLRDGILPKEKIEAQQLQRRVARYVLKDENL
        +++  +TDLGRT  VEILP PSIEAQE MDID QGQPEENW S LIKYL+DGILP EKIEAQQLQRR ARYVLKD+NL
Subjt:  MSMQTQTDLGRTASVEILPEPSIEAQEVMDIDEQGQPEENWTSHLIKYLRDGILPKEKIEAQQLQRRVARYVLKDENL

A0A6J1E1Q5 uncharacterized protein LOC1110256232.0e-2180.56Show/hide
Query:  TDLGRTASVEILPEPSIEAQEVMDIDEQGQPEENWTSHLIKYLRDGILPKEKIEAQQLQRRVARYVLKDENL
        TDLGRT SVEIL EPSI+AQE MDIDEQ Q EENW SHLIKYL+DGILP E IE QQLQR+ ARYVLKDE+L
Subjt:  TDLGRTASVEILPEPSIEAQEVMDIDEQGQPEENWTSHLIKYLRDGILPKEKIEAQQLQRRVARYVLKDENL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAATGCAGACGCAAACCGACTTGGGAAGAACTGCGTCGGTCGAGATTTTGCCTGAGCCGAGCATAGAAGCTCAGGAAGTAATGGATATCGATGAACAAGGGCAACC
AGAAGAAAACTGGACGAGCCATTTGATCAAGTATTTAAGAGACGGGATCCTACCTAAAGAAAAGATAGAGGCTCAACAACTACAACGACGAGTAGCCAGATATGTGCTTA
AAGACGAAAATCTGAGTTTTAACTTTGAAATGAGAAAGTTAAACTTGAGCTTTCTAAAGAAGAAAATGTATTCCAAGAAAGAATGGTTTGAGCTACACAACGTTTCAGTT
GGATTGTTGTATCCTAGAGGGGGCCAGAGAATACCTACTGCACCGGTGGTTGTGGCTTATGTCCTCACTAACAAGAACCCAAAGAAAATTGGTACTGAAAACATGAGCGT
TGAAGAGTTCATGGAACACCAGGAGAAAACTGACAAGTATGAGAAAGATGAGTACAAATTTTTGCAGAATAAATATGATACTAAAGAAGTAAGAGGGCAAGATGTTTTAA
TTCAAGAAGGTAATGAAAATTCCATCGAGAGTGGTTTGAGCTACACAACGTTTCAGTTGGGTTATTGTATCCTAGAGGGGACAGGCCAGAGAATACCTGCTGAGCCGGTG
GTTGATAAAGAAATATACACTGCAGAGGGCTTGAATCTCCTTAAAGAGAGCGAGATACCCAGACCTCAACCTAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAATGCAGACGCAAACCGACTTGGGAAGAACTGCGTCGGTCGAGATTTTGCCTGAGCCGAGCATAGAAGCTCAGGAAGTAATGGATATCGATGAACAAGGGCAACC
AGAAGAAAACTGGACGAGCCATTTGATCAAGTATTTAAGAGACGGGATCCTACCTAAAGAAAAGATAGAGGCTCAACAACTACAACGACGAGTAGCCAGATATGTGCTTA
AAGACGAAAATCTGAGTTTTAACTTTGAAATGAGAAAGTTAAACTTGAGCTTTCTAAAGAAGAAAATGTATTCCAAGAAAGAATGGTTTGAGCTACACAACGTTTCAGTT
GGATTGTTGTATCCTAGAGGGGGCCAGAGAATACCTACTGCACCGGTGGTTGTGGCTTATGTCCTCACTAACAAGAACCCAAAGAAAATTGGTACTGAAAACATGAGCGT
TGAAGAGTTCATGGAACACCAGGAGAAAACTGACAAGTATGAGAAAGATGAGTACAAATTTTTGCAGAATAAATATGATACTAAAGAAGTAAGAGGGCAAGATGTTTTAA
TTCAAGAAGGTAATGAAAATTCCATCGAGAGTGGTTTGAGCTACACAACGTTTCAGTTGGGTTATTGTATCCTAGAGGGGACAGGCCAGAGAATACCTGCTGAGCCGGTG
GTTGATAAAGAAATATACACTGCAGAGGGCTTGAATCTCCTTAAAGAGAGCGAGATACCCAGACCTCAACCTAATTGA
Protein sequenceShow/hide protein sequence
MSMQTQTDLGRTASVEILPEPSIEAQEVMDIDEQGQPEENWTSHLIKYLRDGILPKEKIEAQQLQRRVARYVLKDENLSFNFEMRKLNLSFLKKKMYSKKEWFELHNVSV
GLLYPRGGQRIPTAPVVVAYVLTNKNPKKIGTENMSVEEFMEHQEKTDKYEKDEYKFLQNKYDTKEVRGQDVLIQEGNENSIESGLSYTTFQLGYCILEGTGQRIPAEPV
VDKEIYTAEGLNLLKESEIPRPQPN