; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc09g10160 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g10160
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionzf-RVT domain-containing protein
Genome locationchr9:8585486..8587170
RNA-Seq ExpressionMoc09g10160
SyntenyMoc09g10160
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2623078.1 ribonuclease H protein [Pyrus ussuriensis x Pyrus communis]1.1e-5834.1Show/hide
Query:  KFAAATIVRRNTATRGLLFHRRVVVGSRCTSLEKELSENAERYSGLGIGSFQQRNNALLLKWLWRFTQEEDALWRRVVERIYGTLPHAWLTATPKGVAKG
        K     I R     +G L+   V  G +   ++ E+   ++   GLG+G+ + +N ALL KWLWRF +E ++LW +V+   YG   + W    P   +  
Subjt:  KFAAATIVRRNTATRGLLFHRRVVVGSRCTSLEKELSENAERYSGLGIGSFQQRNNALLLKWLWRFTQEEDALWRRVVERIYGTLPHAWLTATPKGVAKG

Query:  RPWFAIANNINLFLKFLSFKANNGKKIRFWKDHWVGNYSLEMTFPDLYLLSVRKEDTIHDCWNTEQQ--DWDLGFRRGLFDREVNSWLGIINQLDTVRLG
         PW  I+  +  FL+   FK  NG++++ W+D W+    L+  FP L+LLS R    I    +       W+  FRR L + E+     ++ +++ VRL 
Subjt:  RPWFAIANNINLFLKFLSFKANNGKKIRFWKDHWVGNYSLEMTFPDLYLLSVRKEDTIHDCWNTEQQ--DWDLGFRRGLFDREVNSWLGIINQLDTVRLG

Query:  ES-IDGVRWKIDGSGVFTTKSTFFHLSKRCKIIQPPFVKNIWKTKAPKKIKVFLWSVAHRGLNTQDCLQRKCSIWSMLPSACPLCLKAEETIDHLFLHCS
        +S  D  RWK+D SG+FT KS    LS    +   P    IWK+K P K+KV +W VA   LNT D +QR+     + P  C LC   EE+++H+FLHCS
Subjt:  ES-IDGVRWKIDGSGVFTTKSTFFHLSKRCKIIQPPFVKNIWKTKAPKKIKVFLWSVAHRGLNTQDCLQRKCSIWSMLPSACPLCLKAEETIDHLFLHCS

Query:  LAKNCWSLVFCHFNMSLCLPQRVDEWLLQALVGSGFKNAKGTLWNLVVAAVMWNLWLERNKRLFDD-SSLDSHVLWSNIQLTASRLFSLS
             W  +F    +S  +P+   E L       G       LW  +V+AV WN+WLERNKR+FDD + +    LW  ++  A+   S+S
Subjt:  LAKNCWSLVFCHFNMSLCLPQRVDEWLLQALVGSGFKNAKGTLWNLVVAAVMWNLWLERNKRLFDD-SSLDSHVLWSNIQLTASRLFSLS

RVW25634.1 putative ribonuclease H protein [Vitis vinifera]1.1e-5837.31Show/hide
Query:  GLGIGSFQQRNNALLLKWLWRFTQEEDALWRRVVERIYGTLPHAWLTATPKGVAKGRPWFAIANNINLFLKFLSFKANNGKKIRFWKDHWVGNYSLEMTF
        GLG G    RN ALL KWLWR+ +E  ALW +V+  IYG+  + W        +   PW AIA     F KF  F   NG +IRFW D W G   L + +
Subjt:  GLGIGSFQQRNNALLLKWLWRFTQEEDALWRRVVERIYGTLPHAWLTATPKGVAKGRPWFAIANNINLFLKFLSFKANNGKKIRFWKDHWVGNYSLEMTF

Query:  PDLYLLSVRKEDTIHD-CWNTEQQDWDLGFRRGLFDREVNSWLGIINQLDTVRLGESIDGVR-WKIDGSGVFTTKSTFFHLSKRCKIIQPPF--VKNIWK
        P L  +   K   I     +T    W+  FRR L D E+    G++   D + +  S+   R W +  SG+FT KS F  LS+    + PP    K +W 
Subjt:  PDLYLLSVRKEDTIHD-CWNTEQQDWDLGFRRGLFDREVNSWLGIINQLDTVRLGESIDGVR-WKIDGSGVFTTKSTFFHLSKRCKIIQPPF--VKNIWK

Query:  TKAPKKIKVFLWSVAHRGLNTQDCLQRKCSIWSMLPSACPLCLKAEETIDHLFLHCSLAKNCWSLVFCHFNMSLCLPQRVDEWLLQALVGSGFKNAKGTL
         + P K+K F+W VAH+ +NT D LQ +    ++ P  C LC+K  ET+DHLFLHCSL    W  +F    M    P+ + + L     G GF      L
Subjt:  TKAPKKIKVFLWSVAHRGLNTQDCLQRKCSIWSMLPSACPLCLKAEETIDHLFLHCSLAKNCWSLVFCHFNMSLCLPQRVDEWLLQALVGSGFKNAKGTL

Query:  WNLVVAAVMWNLWLERNKRLFDDSSLDSHVLWSNI
        W     A+MW +W ERN R+F+D + +S  LW +I
Subjt:  WNLVVAAVMWNLWLERNKRLFDDSSLDSHVLWSNI

TQD85214.1 hypothetical protein C1H46_029232 [Malus baccata]1.3e-6133.98Show/hide
Query:  GSRCTSLEKELSENAERYSGLGIGSFQQRNNALLLKWLWRFTQEEDALWRRVVERIYGTLPHAWLTATPKGVAKGRPWFAIANNINLFLKFLSFKANNGK
        G +   ++ EL    +   GLG+G+ + +N ALL KWLWRF +E  +LW +V+   YG   + W    P+ V+    W  I++  + FL+   F+  NG+
Subjt:  GSRCTSLEKELSENAERYSGLGIGSFQQRNNALLLKWLWRFTQEEDALWRRVVERIYGTLPHAWLTATPKGVAKGRPWFAIANNINLFLKFLSFKANNGK

Query:  KIRFWKDHWVGNYSLEMTFPDLYLLSVRKEDTIHDCW--NTEQQDWDLGFRRGLFDREVNSWLGIINQLDTVRLGES-IDGVRWKIDGSGVFTTKSTFFH
        ++RFW+D W+    L+  FP L+LLS +    I      ++    W+  FRR L + E+     ++ +++ +RL  S +D  RW ++ SG+FT KS    
Subjt:  KIRFWKDHWVGNYSLEMTFPDLYLLSVRKEDTIHDCW--NTEQQDWDLGFRRGLFDREVNSWLGIINQLDTVRLGES-IDGVRWKIDGSGVFTTKSTFFH

Query:  LSKRCKIIQPPFVKNIWKTKAPKKIKVFLWSVAHRGLNTQDCLQRKCSIWSMLPSACPLCLKAEETIDHLFLHCSLAKNCWSLVFCHFNMSLCLPQRVDE
        LS    +   P    IWK+KAP K+K+ +W VA   LNT D +Q++  +  + P  C LC   EE+++H+FLHCS +   W  +F    +S  +P+   E
Subjt:  LSKRCKIIQPPFVKNIWKTKAPKKIKVFLWSVAHRGLNTQDCLQRKCSIWSMLPSACPLCLKAEETIDHLFLHCSLAKNCWSLVFCHFNMSLCLPQRVDE

Query:  WLLQALVGSGFKNAKGTLWNLVVAAVMWNLWLERNKRLFDD-SSLDSHVLWSNIQLTAS
         L       G       LW  +V+A+ WN+WLERNKR+F+D + + + VLW  ++  AS
Subjt:  WLLQALVGSGFKNAKGTLWNLVVAAVMWNLWLERNKRLFDD-SSLDSHVLWSNIQLTAS

TQD93576.1 hypothetical protein C1H46_020784 [Malus baccata]3.3e-6034.11Show/hide
Query:  KFAAATIVRRNTATRGLLFHRRVVVGSRCTSLEKELSENAERYSGLGIGSFQQRNNALLLKWLWRFTQEEDALWRRVVERIYGTLPHAWLTATPKGVAKG
        K     I R     +G L+   V  G +   ++ E+   ++   GLG+G+ + RN ALL KWLWRF +E  +LW +V+   YG   + W    P   +  
Subjt:  KFAAATIVRRNTATRGLLFHRRVVVGSRCTSLEKELSENAERYSGLGIGSFQQRNNALLLKWLWRFTQEEDALWRRVVERIYGTLPHAWLTATPKGVAKG

Query:  RPWFAIANNINLFLKFLSFKANNGKKIRFWKDHWVGNYSLEMTFPDLYLLSVRKEDTIHDC--WNTEQQDWDLGFRRGLFDREVNSWLGIINQLDTVRLG
         PW  I++   LFL    F+  NG+++RFW+D W+    L+  FP L+LLS      I     ++T    W+  FRR L + E+     ++ +++ VRL 
Subjt:  RPWFAIANNINLFLKFLSFKANNGKKIRFWKDHWVGNYSLEMTFPDLYLLSVRKEDTIHDC--WNTEQQDWDLGFRRGLFDREVNSWLGIINQLDTVRLG

Query:  ES-IDGVRWKIDGSGVFTTKSTFFHLSKRCKIIQPPFVKNIWKTKAPKKIKVFLWSVAHRGLNTQDCLQRKCSIWSMLPSACPLCLKAEETIDHLFLHCS
        +S  D  RWK++ S +FT KS    LS    +   P    IWK+K P K+K+ +W VA   LNT D +QR+     + P  C LC   EE+++H+FLHCS
Subjt:  ES-IDGVRWKIDGSGVFTTKSTFFHLSKRCKIIQPPFVKNIWKTKAPKKIKVFLWSVAHRGLNTQDCLQRKCSIWSMLPSACPLCLKAEETIDHLFLHCS

Query:  LAKNCWSLVFCHFNMSLCLPQRVDEWLLQALVGSGFKNAKGTLWNLVVAAVMWNLWLERNKRLFDD-SSLDSHVLWSNIQLTAS
             W  +F     S  +P+   E L       G       LW  +V+AV WN+WLERNKR+F+D   +   VLW  ++  A+
Subjt:  LAKNCWSLVFCHFNMSLCLPQRVDEWLLQALVGSGFKNAKGTLWNLVVAAVMWNLWLERNKRLFDD-SSLDSHVLWSNIQLTAS

XP_030479135.1 uncharacterized protein LOC115696374 [Cannabis sativa]8.2e-5935.24Show/hide
Query:  LKWLWRFTQEEDALWRRVVERIYGTLPHAWLTATPKGVAKGRPWFAIANNINLFLKFLSFKANNGKKIRFWKDHWVGNYSLEMTFPDLYLLSVRKEDTIH
        +KWLWRF  E ++LW RV+E  YG   + W +   + ++   PW  IA+  + +L+ + FK   G KIRFW+D W+G+ SL  T+P L L+S  K   I 
Subjt:  LKWLWRFTQEEDALWRRVVERIYGTLPHAWLTATPKGVAKGRPWFAIANNINLFLKFLSFKANNGKKIRFWKDHWVGNYSLEMTFPDLYLLSVRKEDTIH

Query:  D------CWNTEQQDWDLGFRRGLFDREVNSWLGIINQLDTVR-LGESIDGVRWKIDGSGVFTTKSTFFHLSKRCKIIQPPFVKNIWKTKAPKKIKVFLW
        +              WD  FRR L ++E+ S +G++ Q++ V+ L  ++D   WK D +GVF++KS F   +    + +PP+ K++WK+ A  ++K+F+W
Subjt:  D------CWNTEQQDWDLGFRRGLFDREVNSWLGIINQLDTVR-LGESIDGVRWKIDGSGVFTTKSTFFHLSKRCKIIQPPFVKNIWKTKAPKKIKVFLW

Query:  SVAHRGLNTQDCLQRKCSIWSMLPSACPLCLKAEETIDHLFLHCSLAKNCWSLVFCHFNMSLCLPQRVDEWLLQALVGSGFKNAKGTLWNLVVAAVMWNL
         VAH  +N  D LQR+     + P  C  C    E ++HLFLHC  +   WS++   F +   LP+ V + L+  + GS     +  LW   V A +W +
Subjt:  SVAHRGLNTQDCLQRKCSIWSMLPSACPLCLKAEETIDHLFLHCSLAKNCWSLVFCHFNMSLCLPQRVDEWLLQALVGSGFKNAKGTLWNLVVAAVMWNL

Query:  WLERNKRLFDDSSLDSHVLWSNIQL-TASRLF
        WLERN R+F+D    + V+W  I+  TA+ +F
Subjt:  WLERNKRLFDDSSLDSHVLWSNIQL-TASRLF

TrEMBL top hitse value%identityAlignment
A0A438CR03 Putative ribonuclease H protein5.2e-5937.31Show/hide
Query:  GLGIGSFQQRNNALLLKWLWRFTQEEDALWRRVVERIYGTLPHAWLTATPKGVAKGRPWFAIANNINLFLKFLSFKANNGKKIRFWKDHWVGNYSLEMTF
        GLG G    RN ALL KWLWR+ +E  ALW +V+  IYG+  + W        +   PW AIA     F KF  F   NG +IRFW D W G   L + +
Subjt:  GLGIGSFQQRNNALLLKWLWRFTQEEDALWRRVVERIYGTLPHAWLTATPKGVAKGRPWFAIANNINLFLKFLSFKANNGKKIRFWKDHWVGNYSLEMTF

Query:  PDLYLLSVRKEDTIHD-CWNTEQQDWDLGFRRGLFDREVNSWLGIINQLDTVRLGESIDGVR-WKIDGSGVFTTKSTFFHLSKRCKIIQPPF--VKNIWK
        P L  +   K   I     +T    W+  FRR L D E+    G++   D + +  S+   R W +  SG+FT KS F  LS+    + PP    K +W 
Subjt:  PDLYLLSVRKEDTIHD-CWNTEQQDWDLGFRRGLFDREVNSWLGIINQLDTVRLGESIDGVR-WKIDGSGVFTTKSTFFHLSKRCKIIQPPF--VKNIWK

Query:  TKAPKKIKVFLWSVAHRGLNTQDCLQRKCSIWSMLPSACPLCLKAEETIDHLFLHCSLAKNCWSLVFCHFNMSLCLPQRVDEWLLQALVGSGFKNAKGTL
         + P K+K F+W VAH+ +NT D LQ +    ++ P  C LC+K  ET+DHLFLHCSL    W  +F    M    P+ + + L     G GF      L
Subjt:  TKAPKKIKVFLWSVAHRGLNTQDCLQRKCSIWSMLPSACPLCLKAEETIDHLFLHCSLAKNCWSLVFCHFNMSLCLPQRVDEWLLQALVGSGFKNAKGTL

Query:  WNLVVAAVMWNLWLERNKRLFDDSSLDSHVLWSNI
        W     A+MW +W ERN R+F+D + +S  LW +I
Subjt:  WNLVVAAVMWNLWLERNKRLFDDSSLDSHVLWSNI

A0A438GDE7 LINE-1 retrotransposable element ORF2 protein8.8e-5937.31Show/hide
Query:  GLGIGSFQQRNNALLLKWLWRFTQEEDALWRRVVERIYGTLPHAWLTATPKGVAKGRPWFAIANNINLFLKFLSFKANNGKKIRFWKDHWVGNYSLEMTF
        GLG G    RN ALL KWLWR+ +E  ALW +V+  IYG+  + W        +   PW AIA     F KF  F   NG +IRFW D W G   L + +
Subjt:  GLGIGSFQQRNNALLLKWLWRFTQEEDALWRRVVERIYGTLPHAWLTATPKGVAKGRPWFAIANNINLFLKFLSFKANNGKKIRFWKDHWVGNYSLEMTF

Query:  PDLYLLSVRKEDTIHD-CWNTEQQDWDLGFRRGLFDREVNSWLGIINQLDTVRLGESIDGVR-WKIDGSGVFTTKSTFFHLSKRCKIIQPPF--VKNIWK
        P L  +   K   I     +T    W+  FRR L D E+    G++   D + +  S+   R W +  SG+FT KS F  LS+    + PP    K +W 
Subjt:  PDLYLLSVRKEDTIHD-CWNTEQQDWDLGFRRGLFDREVNSWLGIINQLDTVRLGESIDGVR-WKIDGSGVFTTKSTFFHLSKRCKIIQPPF--VKNIWK

Query:  TKAPKKIKVFLWSVAHRGLNTQDCLQRKCSIWSMLPSACPLCLKAEETIDHLFLHCSLAKNCWSLVFCHFNMSLCLPQRVDEWLLQALVGSGFKNAKGTL
         + P K+K F+W VAH+ +NT D LQ +    ++ P  C LC+K  ET+DHLFLHCSL    W  +F    M    P+ + + L     G GF      L
Subjt:  TKAPKKIKVFLWSVAHRGLNTQDCLQRKCSIWSMLPSACPLCLKAEETIDHLFLHCSLAKNCWSLVFCHFNMSLCLPQRVDEWLLQALVGSGFKNAKGTL

Query:  WNLVVAAVMWNLWLERNKRLFDDSSLDSHVLWSNI
        W     A+MW +W ERN R+F+D + +S  LW +I
Subjt:  WNLVVAAVMWNLWLERNKRLFDDSSLDSHVLWSNI

A0A540LFH9 zf-RVT domain-containing protein6.5e-6233.98Show/hide
Query:  GSRCTSLEKELSENAERYSGLGIGSFQQRNNALLLKWLWRFTQEEDALWRRVVERIYGTLPHAWLTATPKGVAKGRPWFAIANNINLFLKFLSFKANNGK
        G +   ++ EL    +   GLG+G+ + +N ALL KWLWRF +E  +LW +V+   YG   + W    P+ V+    W  I++  + FL+   F+  NG+
Subjt:  GSRCTSLEKELSENAERYSGLGIGSFQQRNNALLLKWLWRFTQEEDALWRRVVERIYGTLPHAWLTATPKGVAKGRPWFAIANNINLFLKFLSFKANNGK

Query:  KIRFWKDHWVGNYSLEMTFPDLYLLSVRKEDTIHDCW--NTEQQDWDLGFRRGLFDREVNSWLGIINQLDTVRLGES-IDGVRWKIDGSGVFTTKSTFFH
        ++RFW+D W+    L+  FP L+LLS +    I      ++    W+  FRR L + E+     ++ +++ +RL  S +D  RW ++ SG+FT KS    
Subjt:  KIRFWKDHWVGNYSLEMTFPDLYLLSVRKEDTIHDCW--NTEQQDWDLGFRRGLFDREVNSWLGIINQLDTVRLGES-IDGVRWKIDGSGVFTTKSTFFH

Query:  LSKRCKIIQPPFVKNIWKTKAPKKIKVFLWSVAHRGLNTQDCLQRKCSIWSMLPSACPLCLKAEETIDHLFLHCSLAKNCWSLVFCHFNMSLCLPQRVDE
        LS    +   P    IWK+KAP K+K+ +W VA   LNT D +Q++  +  + P  C LC   EE+++H+FLHCS +   W  +F    +S  +P+   E
Subjt:  LSKRCKIIQPPFVKNIWKTKAPKKIKVFLWSVAHRGLNTQDCLQRKCSIWSMLPSACPLCLKAEETIDHLFLHCSLAKNCWSLVFCHFNMSLCLPQRVDE

Query:  WLLQALVGSGFKNAKGTLWNLVVAAVMWNLWLERNKRLFDD-SSLDSHVLWSNIQLTAS
         L       G       LW  +V+A+ WN+WLERNKR+F+D + + + VLW  ++  AS
Subjt:  WLLQALVGSGFKNAKGTLWNLVVAAVMWNLWLERNKRLFDD-SSLDSHVLWSNIQLTAS

A0A540M4H0 zf-RVT domain-containing protein1.6e-6034.11Show/hide
Query:  KFAAATIVRRNTATRGLLFHRRVVVGSRCTSLEKELSENAERYSGLGIGSFQQRNNALLLKWLWRFTQEEDALWRRVVERIYGTLPHAWLTATPKGVAKG
        K     I R     +G L+   V  G +   ++ E+   ++   GLG+G+ + RN ALL KWLWRF +E  +LW +V+   YG   + W    P   +  
Subjt:  KFAAATIVRRNTATRGLLFHRRVVVGSRCTSLEKELSENAERYSGLGIGSFQQRNNALLLKWLWRFTQEEDALWRRVVERIYGTLPHAWLTATPKGVAKG

Query:  RPWFAIANNINLFLKFLSFKANNGKKIRFWKDHWVGNYSLEMTFPDLYLLSVRKEDTIHDC--WNTEQQDWDLGFRRGLFDREVNSWLGIINQLDTVRLG
         PW  I++   LFL    F+  NG+++RFW+D W+    L+  FP L+LLS      I     ++T    W+  FRR L + E+     ++ +++ VRL 
Subjt:  RPWFAIANNINLFLKFLSFKANNGKKIRFWKDHWVGNYSLEMTFPDLYLLSVRKEDTIHDC--WNTEQQDWDLGFRRGLFDREVNSWLGIINQLDTVRLG

Query:  ES-IDGVRWKIDGSGVFTTKSTFFHLSKRCKIIQPPFVKNIWKTKAPKKIKVFLWSVAHRGLNTQDCLQRKCSIWSMLPSACPLCLKAEETIDHLFLHCS
        +S  D  RWK++ S +FT KS    LS    +   P    IWK+K P K+K+ +W VA   LNT D +QR+     + P  C LC   EE+++H+FLHCS
Subjt:  ES-IDGVRWKIDGSGVFTTKSTFFHLSKRCKIIQPPFVKNIWKTKAPKKIKVFLWSVAHRGLNTQDCLQRKCSIWSMLPSACPLCLKAEETIDHLFLHCS

Query:  LAKNCWSLVFCHFNMSLCLPQRVDEWLLQALVGSGFKNAKGTLWNLVVAAVMWNLWLERNKRLFDD-SSLDSHVLWSNIQLTAS
             W  +F     S  +P+   E L       G       LW  +V+AV WN+WLERNKR+F+D   +   VLW  ++  A+
Subjt:  LAKNCWSLVFCHFNMSLCLPQRVDEWLLQALVGSGFKNAKGTLWNLVVAAVMWNLWLERNKRLFDD-SSLDSHVLWSNIQLTAS

A0A5N5H648 Ribonuclease H protein5.2e-5934.1Show/hide
Query:  KFAAATIVRRNTATRGLLFHRRVVVGSRCTSLEKELSENAERYSGLGIGSFQQRNNALLLKWLWRFTQEEDALWRRVVERIYGTLPHAWLTATPKGVAKG
        K     I R     +G L+   V  G +   ++ E+   ++   GLG+G+ + +N ALL KWLWRF +E ++LW +V+   YG   + W    P   +  
Subjt:  KFAAATIVRRNTATRGLLFHRRVVVGSRCTSLEKELSENAERYSGLGIGSFQQRNNALLLKWLWRFTQEEDALWRRVVERIYGTLPHAWLTATPKGVAKG

Query:  RPWFAIANNINLFLKFLSFKANNGKKIRFWKDHWVGNYSLEMTFPDLYLLSVRKEDTIHDCWNTEQQ--DWDLGFRRGLFDREVNSWLGIINQLDTVRLG
         PW  I+  +  FL+   FK  NG++++ W+D W+    L+  FP L+LLS R    I    +       W+  FRR L + E+     ++ +++ VRL 
Subjt:  RPWFAIANNINLFLKFLSFKANNGKKIRFWKDHWVGNYSLEMTFPDLYLLSVRKEDTIHDCWNTEQQ--DWDLGFRRGLFDREVNSWLGIINQLDTVRLG

Query:  ES-IDGVRWKIDGSGVFTTKSTFFHLSKRCKIIQPPFVKNIWKTKAPKKIKVFLWSVAHRGLNTQDCLQRKCSIWSMLPSACPLCLKAEETIDHLFLHCS
        +S  D  RWK+D SG+FT KS    LS    +   P    IWK+K P K+KV +W VA   LNT D +QR+     + P  C LC   EE+++H+FLHCS
Subjt:  ES-IDGVRWKIDGSGVFTTKSTFFHLSKRCKIIQPPFVKNIWKTKAPKKIKVFLWSVAHRGLNTQDCLQRKCSIWSMLPSACPLCLKAEETIDHLFLHCS

Query:  LAKNCWSLVFCHFNMSLCLPQRVDEWLLQALVGSGFKNAKGTLWNLVVAAVMWNLWLERNKRLFDD-SSLDSHVLWSNIQLTASRLFSLS
             W  +F    +S  +P+   E L       G       LW  +V+AV WN+WLERNKR+FDD + +    LW  ++  A+   S+S
Subjt:  LAKNCWSLVFCHFNMSLCLPQRVDEWLLQALVGSGFKNAKGTLWNLVVAAVMWNLWLERNKRLFDD-SSLDSHVLWSNIQLTASRLFSLS

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657501.2e-1723.37Show/hide
Query:  ERYSGLGIGSFQQRNNALLLKWLWRFTQEEDALWRRVVERIY--GTLPHA-WLTATPKGVAKGRPWFAIANNI-NLFLKFLSFKANNGKKIRFWKDHWVG
        ++  GLG+ + +  N AL+ K  WR  QE+++LW  V+++ Y  G +  + WL   PKG +    W +IA  + ++    + +   +G++IRFW D WV 
Subjt:  ERYSGLGIGSFQQRNNALLLKWLWRFTQEEDALWRRVVERIY--GTLPHA-WLTATPKGVAKGRPWFAIANNI-NLFLKFLSFKANNGKKIRFWKDHWVG

Query:  NYSLEMTFPDLYLLSVRKEDTIHDCWNTEQQD-WDLGFRRGLFDREVNSWLGIINQLDTVRLGESI-----DGVRWKIDGSGVFTTKSTFFHLSKRCKII
                    LL +   +   DC     +D W  G  RG    +++ +     +L+   +   +     D + WK    G F+ +S +  L+   ++ 
Subjt:  NYSLEMTFPDLYLLSVRKEDTIHDCWNTEQQD-WDLGFRRGLFDREVNSWLGIINQLDTVRLGESI-----DGVRWKIDGSGVFTTKSTFFHLSKRCKII

Query:  QP---PFVKNIWKTKAPKKIKVFLWSVAHRGLNTQDCLQRKCSIWSMLPSACPLCLKAEETIDHLFLHCSLAKNCWSLVFCHFNMSLCLPQRVDEWLLQA
        +P    F   +WK + P+++K FLW V ++ + T++   R+    S   + C +C    E++ H+   C      W  V           + + EWL   
Subjt:  QP---PFVKNIWKTKAPKKIKVFLWSVAHRGLNTQDCLQRKCSIWSMLPSACPLCLKAEETIDHLFLHCSLAKNCWSLVFCHFNMSLCLPQRVDEWLLQA

Query:  LVGSGFKNAKGTLWNLVVAAVMWNLWLERNKRLFDDSS
        L        +   W+ + A ++W  W  R   +F +++
Subjt:  LVGSGFKNAKGTLWNLVVAAVMWNLWLERNKRLFDDSS

Arabidopsis top hitse value%identityAlignment
AT5G16486.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein4.2e-0524.88Show/hide
Query:  WFAIANNINLFLKFLSFKANNGKKIRFWKDHWVGNYSLEMTFPDL--YLLSVRKEDTIHDCWNTEQQDWDLGFR-RGLFDREVNSWLGIINQLDTVRLGE
        W +I     +  +F+  K  +G    FW ++W     L     DL   +  + +  ++ D    +   W  G R R    + + + L  ++ +  +++  
Subjt:  WFAIANNINLFLKFLSFKANNGKKIRFWKDHWVGNYSLEMTFPDL--YLLSVRKEDTIHDCWNTEQQDWDLGFR-RGLFDREVNSWLGIINQLDTVRLGE

Query:  SIDGVRWKIDGSGV---FTTKSTFFHLSKRCKIIQPPFVKNIW-KTKAPKKIKVFLWSVAHRGLNTQDCLQRKCSIWSM-LPSACPLCLKAEETIDHLFL
          D   WK+ GS     F++ +T+ HL+   + +   + K IW K + PK   +   ++ HR L T+D    K   W + +PS C LC   +ET  HLF 
Subjt:  SIDGVRWKIDGSGV---FTTKSTFFHLSKRCKIIQPPFVKNIW-KTKAPKKIKVFLWSVAHRGLNTQDCLQRKCSIWSM-LPSACPLCLKAEETIDHLFL

Query:  HCSLA
         C  A
Subjt:  HCSLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTGCCGCTGCGCCGGAAGTCGTCGTGTCGTGGGACTGCTCGAAGCCGCCGAAACCAAATTCGCCGCTGCTACTATAGTTCGAAGAAACACCGCCACTCGTGGGTT
GCTATTCCACCGTCGGGTCGTCGTCGGCAGCCGCTGCACCTCGCTGGAAAAAGAACTTTCAGAGAACGCGGAGCGTTACAGTGGTCTTGGTATAGGATCGTTCCAGCAGA
GAAACAACGCTCTTTTACTTAAATGGTTATGGAGGTTTACTCAAGAAGAAGATGCTCTTTGGAGGCGTGTGGTGGAACGTATTTATGGTACCCTTCCTCATGCATGGCTT
ACCGCCACTCCAAAAGGTGTAGCAAAAGGGCGGCCATGGTTTGCGATTGCGAACAACATAAACCTTTTCCTTAAGTTTCTGTCTTTCAAGGCAAATAATGGGAAGAAAAT
CAGGTTCTGGAAGGATCATTGGGTTGGAAACTATTCGTTGGAGATGACCTTTCCTGACCTTTACTTACTCTCTGTGAGAAAGGAGGACACGATCCACGATTGTTGGAACA
CCGAGCAACAAGACTGGGACCTAGGCTTTCGAAGGGGGCTCTTCGACAGAGAAGTCAACAGTTGGCTAGGCATAATCAATCAGCTAGATACGGTCAGATTGGGAGAGTCC
ATAGATGGGGTGAGATGGAAGATAGATGGTTCAGGTGTGTTCACTACCAAGTCCACCTTTTTCCATCTTTCAAAGCGTTGTAAGATTATCCAACCCCCCTTTGTCAAGAA
CATTTGGAAGACAAAGGCCCCTAAGAAGATTAAAGTCTTTCTTTGGTCGGTGGCTCACCGTGGTTTAAACACTCAGGACTGCCTTCAAAGGAAGTGCAGTATTTGGAGCA
TGCTTCCCTCTGCATGCCCCTTGTGCCTTAAGGCTGAAGAGACCATCGATCACTTATTTCTCCACTGCTCACTTGCCAAAAATTGTTGGTCCCTAGTTTTTTGCCATTTC
AACATGAGCCTTTGTCTCCCGCAACGAGTAGATGAGTGGCTTCTTCAAGCCCTAGTGGGTAGCGGATTCAAAAATGCCAAAGGAACCTTGTGGAATCTCGTGGTGGCAGC
AGTTATGTGGAACCTTTGGCTGGAACGAAACAAAAGACTTTTTGATGACTCTTCTTTAGATTCTCATGTTTTGTGGAGTAATATTCAGCTCACTGCTTCTAGGTTGTTCT
CCCTTTCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTGCCGCTGCGCCGGAAGTCGTCGTGTCGTGGGACTGCTCGAAGCCGCCGAAACCAAATTCGCCGCTGCTACTATAGTTCGAAGAAACACCGCCACTCGTGGGTT
GCTATTCCACCGTCGGGTCGTCGTCGGCAGCCGCTGCACCTCGCTGGAAAAAGAACTTTCAGAGAACGCGGAGCGTTACAGTGGTCTTGGTATAGGATCGTTCCAGCAGA
GAAACAACGCTCTTTTACTTAAATGGTTATGGAGGTTTACTCAAGAAGAAGATGCTCTTTGGAGGCGTGTGGTGGAACGTATTTATGGTACCCTTCCTCATGCATGGCTT
ACCGCCACTCCAAAAGGTGTAGCAAAAGGGCGGCCATGGTTTGCGATTGCGAACAACATAAACCTTTTCCTTAAGTTTCTGTCTTTCAAGGCAAATAATGGGAAGAAAAT
CAGGTTCTGGAAGGATCATTGGGTTGGAAACTATTCGTTGGAGATGACCTTTCCTGACCTTTACTTACTCTCTGTGAGAAAGGAGGACACGATCCACGATTGTTGGAACA
CCGAGCAACAAGACTGGGACCTAGGCTTTCGAAGGGGGCTCTTCGACAGAGAAGTCAACAGTTGGCTAGGCATAATCAATCAGCTAGATACGGTCAGATTGGGAGAGTCC
ATAGATGGGGTGAGATGGAAGATAGATGGTTCAGGTGTGTTCACTACCAAGTCCACCTTTTTCCATCTTTCAAAGCGTTGTAAGATTATCCAACCCCCCTTTGTCAAGAA
CATTTGGAAGACAAAGGCCCCTAAGAAGATTAAAGTCTTTCTTTGGTCGGTGGCTCACCGTGGTTTAAACACTCAGGACTGCCTTCAAAGGAAGTGCAGTATTTGGAGCA
TGCTTCCCTCTGCATGCCCCTTGTGCCTTAAGGCTGAAGAGACCATCGATCACTTATTTCTCCACTGCTCACTTGCCAAAAATTGTTGGTCCCTAGTTTTTTGCCATTTC
AACATGAGCCTTTGTCTCCCGCAACGAGTAGATGAGTGGCTTCTTCAAGCCCTAGTGGGTAGCGGATTCAAAAATGCCAAAGGAACCTTGTGGAATCTCGTGGTGGCAGC
AGTTATGTGGAACCTTTGGCTGGAACGAAACAAAAGACTTTTTGATGACTCTTCTTTAGATTCTCATGTTTTGTGGAGTAATATTCAGCTCACTGCTTCTAGGTTGTTCT
CCCTTTCGTGA
Protein sequenceShow/hide protein sequence
MACRCAGSRRVVGLLEAAETKFAAATIVRRNTATRGLLFHRRVVVGSRCTSLEKELSENAERYSGLGIGSFQQRNNALLLKWLWRFTQEEDALWRRVVERIYGTLPHAWL
TATPKGVAKGRPWFAIANNINLFLKFLSFKANNGKKIRFWKDHWVGNYSLEMTFPDLYLLSVRKEDTIHDCWNTEQQDWDLGFRRGLFDREVNSWLGIINQLDTVRLGES
IDGVRWKIDGSGVFTTKSTFFHLSKRCKIIQPPFVKNIWKTKAPKKIKVFLWSVAHRGLNTQDCLQRKCSIWSMLPSACPLCLKAEETIDHLFLHCSLAKNCWSLVFCHF
NMSLCLPQRVDEWLLQALVGSGFKNAKGTLWNLVVAAVMWNLWLERNKRLFDDSSLDSHVLWSNIQLTASRLFSLS