; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc09g10290 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g10290
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag/pol protein
Genome locationchr9:8694027..8710652
RNA-Seq ExpressionMoc09g10290
SyntenyMoc09g10290
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034863.1 gag/pol protein [Cucumis melo var. makuwa]3.5e-1360.98Show/hide
Query:  SKVHQGSTSTTKFAPSSSGSKTFKKKKAGGKGSKPNPTDATAKKGKAKVADKGKCFHCNVNEYWKRNCSKYLANKKKTNEVS
        +K H+GSTS TK  PSSSG+K +KKKK GG+G+K NP  ATAK  K   A KG CFHCN   +WKRNC KYLA KKK  +V+
Subjt:  SKVHQGSTSTTKFAPSSSGSKTFKKKKAGGKGSKPNPTDATAKKGKAKVADKGKCFHCNVNEYWKRNCSKYLANKKKTNEVS

KAA0036111.1 gag/pol protein [Cucumis melo var. makuwa]4.2e-1464.47Show/hide
Query:  KFAPSSSGSKTFKKKKAGGKGSKPNPTDATAKKGKAKVADKGKCFHCNVNEYWKRNCSKYLANKKKTNEVSLRHIC
        +FAPSSSGSK  +KKKA   G +  PT A   KGKAK+A KGKCFHCNV+ YWKRNC KYLA KKK NE +  H+C
Subjt:  KFAPSSSGSKTFKKKKAGGKGSKPNPTDATAKKGKAKVADKGKCFHCNVNEYWKRNCSKYLANKKKTNEVSLRHIC

KAA0054278.1 gag/pol protein [Cucumis melo var. makuwa]2.1e-1349.07Show/hide
Query:  REEVLIGGVQLFDRGKVLQRIQSLQLQPSKVHQGSTSTTKFAPSSSGSKTFKKKKAGGKGSKPNPTDATAKKGKAKVADKGKCFHCNVNEYWKRNCSKYL
        + E+++   Q+ D  + +    S+Q+   K       + +FAPSSSGSK  +K+K GGKG    PT A   KGKAKVA KGKCFHCNVNE+WKRNC KYL
Subjt:  REEVLIGGVQLFDRGKVLQRIQSLQLQPSKVHQGSTSTTKFAPSSSGSKTFKKKKAGGKGSKPNPTDATAKKGKAKVADKGKCFHCNVNEYWKRNCSKYL

Query:  ANKKKTNE
          KK+  E
Subjt:  ANKKKTNE

TYJ96675.1 gag/pol protein [Cucumis melo var. makuwa]3.5e-1360.98Show/hide
Query:  SKVHQGSTSTTKFAPSSSGSKTFKKKKAGGKGSKPNPTDATAKKGKAKVADKGKCFHCNVNEYWKRNCSKYLANKKKTNEVS
        +K H+GSTS TK  PSSSG+K +KKKK GG+G+K NP  ATAK  K   A KG CFHCN   +WKRNC KYLA KKK  +V+
Subjt:  SKVHQGSTSTTKFAPSSSGSKTFKKKKAGGKGSKPNPTDATAKKGKAKVADKGKCFHCNVNEYWKRNCSKYLANKKKTNEVS

TYK14981.1 DNA-binding protein HEXBP-like [Cucumis melo var. makuwa]2.1e-1349.07Show/hide
Query:  REEVLIGGVQLFDRGKVLQRIQSLQLQPSKVHQGSTSTTKFAPSSSGSKTFKKKKAGGKGSKPNPTDATAKKGKAKVADKGKCFHCNVNEYWKRNCSKYL
        + E+++   Q+ D  + +    S+Q+   K       + +FAPSSSGSK  +K+K GGKG    PT A   KGKAKVA KGKCFHCNVNE+WKRNC KYL
Subjt:  REEVLIGGVQLFDRGKVLQRIQSLQLQPSKVHQGSTSTTKFAPSSSGSKTFKKKKAGGKGSKPNPTDATAKKGKAKVADKGKCFHCNVNEYWKRNCSKYL

Query:  ANKKKTNE
          KK+  E
Subjt:  ANKKKTNE

TrEMBL top hitse value%identityAlignment
A0A5A7SWF4 Gag/pol protein1.7e-1360.98Show/hide
Query:  SKVHQGSTSTTKFAPSSSGSKTFKKKKAGGKGSKPNPTDATAKKGKAKVADKGKCFHCNVNEYWKRNCSKYLANKKKTNEVS
        +K H+GSTS TK  PSSSG+K +KKKK GG+G+K NP  ATAK  K   A KG CFHCN   +WKRNC KYLA KKK  +V+
Subjt:  SKVHQGSTSTTKFAPSSSGSKTFKKKKAGGKGSKPNPTDATAKKGKAKVADKGKCFHCNVNEYWKRNCSKYLANKKKTNEVS

A0A5A7UH21 Gag/pol protein1.0e-1349.07Show/hide
Query:  REEVLIGGVQLFDRGKVLQRIQSLQLQPSKVHQGSTSTTKFAPSSSGSKTFKKKKAGGKGSKPNPTDATAKKGKAKVADKGKCFHCNVNEYWKRNCSKYL
        + E+++   Q+ D  + +    S+Q+   K       + +FAPSSSGSK  +K+K GGKG    PT A   KGKAKVA KGKCFHCNVNE+WKRNC KYL
Subjt:  REEVLIGGVQLFDRGKVLQRIQSLQLQPSKVHQGSTSTTKFAPSSSGSKTFKKKKAGGKGSKPNPTDATAKKGKAKVADKGKCFHCNVNEYWKRNCSKYL

Query:  ANKKKTNE
          KK+  E
Subjt:  ANKKKTNE

A0A5D3BDY3 Gag/pol protein1.7e-1360.98Show/hide
Query:  SKVHQGSTSTTKFAPSSSGSKTFKKKKAGGKGSKPNPTDATAKKGKAKVADKGKCFHCNVNEYWKRNCSKYLANKKKTNEVS
        +K H+GSTS TK  PSSSG+K +KKKK GG+G+K NP  ATAK  K   A KG CFHCN   +WKRNC KYLA KKK  +V+
Subjt:  SKVHQGSTSTTKFAPSSSGSKTFKKKKAGGKGSKPNPTDATAKKGKAKVADKGKCFHCNVNEYWKRNCSKYLANKKKTNEVS

A0A5D3CT18 DNA-binding protein HEXBP-like1.0e-1349.07Show/hide
Query:  REEVLIGGVQLFDRGKVLQRIQSLQLQPSKVHQGSTSTTKFAPSSSGSKTFKKKKAGGKGSKPNPTDATAKKGKAKVADKGKCFHCNVNEYWKRNCSKYL
        + E+++   Q+ D  + +    S+Q+   K       + +FAPSSSGSK  +K+K GGKG    PT A   KGKAKVA KGKCFHCNVNE+WKRNC KYL
Subjt:  REEVLIGGVQLFDRGKVLQRIQSLQLQPSKVHQGSTSTTKFAPSSSGSKTFKKKKAGGKGSKPNPTDATAKKGKAKVADKGKCFHCNVNEYWKRNCSKYL

Query:  ANKKKTNE
          KK+  E
Subjt:  ANKKKTNE

A0A5D3DVV5 Gag/pol protein2.0e-1464.47Show/hide
Query:  KFAPSSSGSKTFKKKKAGGKGSKPNPTDATAKKGKAKVADKGKCFHCNVNEYWKRNCSKYLANKKKTNEVSLRHIC
        +FAPSSSGSK  +KKKA   G +  PT A   KGKAK+A KGKCFHCNV+ YWKRNC KYLA KKK NE +  H+C
Subjt:  KFAPSSSGSKTFKKKKAGGKGSKPNPTDATAKKGKAKVADKGKCFHCNVNEYWKRNCSKYLANKKKTNEVSLRHIC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATAGGCTTACATTTGGTCTCGACGGTTTTTTTTTTCGACTGAGATCCTCTCTAGAACGCCTCTCTCTCTCTCAAAGAATTCCCCTACAAATTCTTCCATCC
AGCTCCTACAAGCCCAATCGTCGCCAGAGATATAGAGAGGAAGTCCTGATCGGAGGCGTCCAACTATTTGATCGAGGAAAAGTTCTGCAAAGGATTCAATCCCTT
CAGTTGCAACCTTCAAAAGTCCACCAAGGTTCGACCTCTACAACCAAATTTGCACCCTCTTCTTCTGGAAGTAAGACTTTCAAGAAAAAGAAGGCTGGTGGTAAG
GGGTCCAAGCCTAACCCTACTGATGCCACTGCCAAGAAAGGCAAGGCCAAGGTTGCAGATAAAGGAAAGTGTTTCCACTGCAACGTGAACGAGTATTGGAAGCGC
AACTGCTCGAAATACCTGGCCAACAAGAAGAAAACCAACGAAGTTAGTTTACGTCACATCTGCATTTGGATATGTCCGGTGTCACGATCATACATTTTTCAACCG
TGCGGCGCCATGATCCTAGCTCGACCATGGCCAGCCGTACGAGGAACTCTAGCTCCAATTCACTTCTCACGCCCTTTACTGGCTTCATCGGACCTTAGGCGAGGT
TCTTTCTTCCTCGACCGAGCTTCACTTGCAGCAGATTTCTCACTTGTCTCGGCAATGCACGTCGCCCGCCAAGGTCTTATAAACGCGACGTCACAACTTGATTTC
AACCATCTTGGTTCTCGGCCACTCGGCCGTCCCGCTCTTACGATGAGCCAGAACCTTACCGGGATGACCATCCGGACACTATCGTGGCACGACGACTCTTGCGCC
CGTGCCGTGTCGTTCGAGCATACAGTACCGCATAGGGACCCTCGTGGTGCAACCTTCGACACATGGGCCAAGGCGCAATGCCGGCACACCCATGCCGCCCGACAC
TGTCCTCGAGTTTGCTATCCTCATCTTATAGACACTAGCCCTCGCCATGACACACGCATGTGCCATGGGGTGGCTCGCTTAGGCCCTGACATGGCCCAGGGTGAT
GGACCATCCTCCTTGGTCGTATCACGACACTTCTTTCTCGGCCCTCGACATGGCTCGATGGGCGACATATGCTTGTCGCTGACACTTGCACACTACGTGGGCGTC
ACAACTTACTCTCTACTAAATCCTATAGCCATGCATGAGAACATTGCTTCCCATGATCTCACGATTATGACCTTAAATGATGCGTACGTACAAAGACATAAGATC
GAATTCCTTTTAAAGATCTCTTTGGAGCCCGGAGGAGACCCAAAGTCCACACCAAGGAAAAGGGTGCAGAAGGAAAAGGGGTTCCCAATTAACTTTGGGAGACTT
ATTGAGGGAGCAATTCATGAATGCCCAGCACGCAAGAATGGTACATTGTACTCTCCTGAATGGATCACATCTCTCAACCTTCGTCAAGGTGGATCTGGTCTGGGG
TGGTCAGCGGATCGTATTGGCCTTGGGCGGATTTGGTCGGACGACGAGACGGTAGATCTAGTTTGGGACATGGCGTATCAAGCAAATATGGTACGTGTTGTGGCC
AACGGGGAGGGTGGCAGCGCAAGACGGTATGGTGGCCTTGAAGGTGAGTGGCGGGATGGCGACTTGCGGATCTGCTTCGTGAGGAAGACGATGGCTGTGGGGTGC
ATGAAGTTGCGTGAGACCAAAAGCTGGGGATGGACATATATCCTCATTGGTGCCCAGCCCAGCACCATTGCTGTCACCATTGTGGCTGCCACTGTTGTTGCTCAA
CCCACAGATGTCGTTGTTGCTCAGTTCACCGCCACTACTTCAGCCATCACGGTTGACCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGCATAGGCTTACATTTGGTCTCGACGGTTTTTTTTTTCGACTGAGATCCTCTCTAGAACGCCTCTCTCTCTCTCAAAGAATTCCCCTACAAATTCTTCCATCC
AGCTCCTACAAGCCCAATCGTCGCCAGAGATATAGAGAGGAAGTCCTGATCGGAGGCGTCCAACTATTTGATCGAGGAAAAGTTCTGCAAAGGATTCAATCCCTT
CAGTTGCAACCTTCAAAAGTCCACCAAGGTTCGACCTCTACAACCAAATTTGCACCCTCTTCTTCTGGAAGTAAGACTTTCAAGAAAAAGAAGGCTGGTGGTAAG
GGGTCCAAGCCTAACCCTACTGATGCCACTGCCAAGAAAGGCAAGGCCAAGGTTGCAGATAAAGGAAAGTGTTTCCACTGCAACGTGAACGAGTATTGGAAGCGC
AACTGCTCGAAATACCTGGCCAACAAGAAGAAAACCAACGAAGTTAGTTTACGTCACATCTGCATTTGGATATGTCCGGTGTCACGATCATACATTTTTCAACCG
TGCGGCGCCATGATCCTAGCTCGACCATGGCCAGCCGTACGAGGAACTCTAGCTCCAATTCACTTCTCACGCCCTTTACTGGCTTCATCGGACCTTAGGCGAGGT
TCTTTCTTCCTCGACCGAGCTTCACTTGCAGCAGATTTCTCACTTGTCTCGGCAATGCACGTCGCCCGCCAAGGTCTTATAAACGCGACGTCACAACTTGATTTC
AACCATCTTGGTTCTCGGCCACTCGGCCGTCCCGCTCTTACGATGAGCCAGAACCTTACCGGGATGACCATCCGGACACTATCGTGGCACGACGACTCTTGCGCC
CGTGCCGTGTCGTTCGAGCATACAGTACCGCATAGGGACCCTCGTGGTGCAACCTTCGACACATGGGCCAAGGCGCAATGCCGGCACACCCATGCCGCCCGACAC
TGTCCTCGAGTTTGCTATCCTCATCTTATAGACACTAGCCCTCGCCATGACACACGCATGTGCCATGGGGTGGCTCGCTTAGGCCCTGACATGGCCCAGGGTGAT
GGACCATCCTCCTTGGTCGTATCACGACACTTCTTTCTCGGCCCTCGACATGGCTCGATGGGCGACATATGCTTGTCGCTGACACTTGCACACTACGTGGGCGTC
ACAACTTACTCTCTACTAAATCCTATAGCCATGCATGAGAACATTGCTTCCCATGATCTCACGATTATGACCTTAAATGATGCGTACGTACAAAGACATAAGATC
GAATTCCTTTTAAAGATCTCTTTGGAGCCCGGAGGAGACCCAAAGTCCACACCAAGGAAAAGGGTGCAGAAGGAAAAGGGGTTCCCAATTAACTTTGGGAGACTT
ATTGAGGGAGCAATTCATGAATGCCCAGCACGCAAGAATGGTACATTGTACTCTCCTGAATGGATCACATCTCTCAACCTTCGTCAAGGTGGATCTGGTCTGGGG
TGGTCAGCGGATCGTATTGGCCTTGGGCGGATTTGGTCGGACGACGAGACGGTAGATCTAGTTTGGGACATGGCGTATCAAGCAAATATGGTACGTGTTGTGGCC
AACGGGGAGGGTGGCAGCGCAAGACGGTATGGTGGCCTTGAAGGTGAGTGGCGGGATGGCGACTTGCGGATCTGCTTCGTGAGGAAGACGATGGCTGTGGGGTGC
ATGAAGTTGCGTGAGACCAAAAGCTGGGGATGGACATATATCCTCATTGGTGCCCAGCCCAGCACCATTGCTGTCACCATTGTGGCTGCCACTGTTGTTGCTCAA
CCCACAGATGTCGTTGTTGCTCAGTTCACCGCCACTACTTCAGCCATCACGGTTGACCCATAA
Protein sequenceShow/hide protein sequence
MHRLTFGLDGFFFRLRSSLERLSLSQRIPLQILPSSSYKPNRRQRYREEVLIGGVQLFDRGKVLQRIQSLQLQPSKVHQGSTSTTKFAPSSSGSKTFKKKKAGGK
GSKPNPTDATAKKGKAKVADKGKCFHCNVNEYWKRNCSKYLANKKKTNEVSLRHICIWICPVSRSYIFQPCGAMILARPWPAVRGTLAPIHFSRPLLASSDLRRG
SFFLDRASLAADFSLVSAMHVARQGLINATSQLDFNHLGSRPLGRPALTMSQNLTGMTIRTLSWHDDSCARAVSFEHTVPHRDPRGATFDTWAKAQCRHTHAARH
CPRVCYPHLIDTSPRHDTRMCHGVARLGPDMAQGDGPSSLVVSRHFFLGPRHGSMGDICLSLTLAHYVGVTTYSLLNPIAMHENIASHDLTIMTLNDAYVQRHKI
EFLLKISLEPGGDPKSTPRKRVQKEKGFPINFGRLIEGAIHECPARKNGTLYSPEWITSLNLRQGGSGLGWSADRIGLGRIWSDDETVDLVWDMAYQANMVRVVA
NGEGGSARRYGGLEGEWRDGDLRICFVRKTMAVGCMKLRETKSWGWTYILIGAQPSTIAVTIVAATVVAQPTDVVVAQFTATTSAITVDP