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Moc09g10370 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g10370
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr9:8749193..8752436
RNA-Seq ExpressionMoc09g10370
SyntenyMoc09g10370
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150863.1 uncharacterized protein LOC111018910 [Momordica charantia]3.4e-3762.11Show/hide
Query:  IETYYNGLDDATHLVIDASANGALLEKPYTEAFNILERISSNNHSWSDPRAIQGRGRKRLNESESFTVLN--CENLTDLVMRSMTQQNTVGASAGKANVS
        IE YYNGLDDAT LV   S N ALL KPY EAFNILERISSN HS SD RAIQGRG KRLNES+S++  N   EN+ DLV RSMTQQ+TVGA  GKAN S
Subjt:  IETYYNGLDDATHLVIDASANGALLEKPYTEAFNILERISSNNHSWSDPRAIQGRGRKRLNESESFTVLN--CENLTDLVMRSMTQQNTVGASAGKANVS

Query:  HIQGISYSFCEGDHHYNNCPDNPESMRISDGCTDGSDSSSNGSNDGGSGDSGSNNGGLRNN
        H QG SYSF  G HHYNNCP NPES+     C   + +S N S       S + N G RN+
Subjt:  HIQGISYSFCEGDHHYNNCPDNPESMRISDGCTDGSDSSSNGSNDGGSGDSGSNNGGLRNN

XP_022150863.1 uncharacterized protein LOC111018910 [Momordica charantia]1.9e-0375.76Show/hide
Query:  MNSPNPNMRQPIPPNVRIEEIVDGVLVAVDPEI
        MN PNPN+ QPIPPNVRIEEIVDGV VA + E+
Subjt:  MNSPNPNMRQPIPPNVRIEEIVDGVLVAVDPEI

XP_022150863.1 uncharacterized protein LOC111018910 [Momordica charantia]2.2e-2866.06Show/hide
Query:  EAFNILERISSNNHSWSDPRAIQGRGRKRLNESESFTVLN--CENLTDLVMRSMTQQNTVGASAGKANVSHIQGISYSFCEGDHHYNNCPDNPESMRISD
        EAFNILERISSNNHSW DP+A+QG+  K L ESES+T LN   ENLTDLVMRS+TQQ+  GAS G  NV+ IQGIS SF EGDHHYNNCP NPES     
Subjt:  EAFNILERISSNNHSWSDPRAIQGRGRKRLNESESFTVLN--CENLTDLVMRSMTQQNTVGASAGKANVSHIQGISYSFCEGDHHYNNCPDNPESMRISD

Query:  GCTDGSDSS
        G   G+ ++
Subjt:  GCTDGSDSS

XP_022151504.1 uncharacterized protein LOC111019429 [Momordica charantia]4.0e-2255.56Show/hide
Query:  EIETYYNGLDDATHLVIDASANGALLEKPYTEAFNILERISSNNHSWSDPRAIQGRGRKRLNESESFTVLN--CENLTDLVMRSMTQQNTVGASAGKANV
        +IETYYNGLDDAT LVIDASANG+                             +G+G   LNESESFT LN   ENLTDLVMRSMTQQN V ASA KANV
Subjt:  EIETYYNGLDDATHLVIDASANGALLEKPYTEAFNILERISSNNHSWSDPRAIQGRGRKRLNESESFTVLN--CENLTDLVMRSMTQQNTVGASAGKANV

Query:  SHIQGISYSFCEGDHHYNNCPDNPES
        S+IQGI  S C+G+H++N+CP N  S
Subjt:  SHIQGISYSFCEGDHHYNNCPDNPES

XP_022156835.1 uncharacterized protein LOC111023669 [Momordica charantia]1.3e-4970Show/hide
Query:  EIETYYNGLDDATHLVIDASANGALLEKPYTEAFNILERISSNNHSWSDPRAIQGRGRKRLNESESFTVLN--CENLTDLVMRSMTQQNTVGASAGKANV
        +IE YY GLDDAT LVIDAS NGALL KPY EAFNILERISSNNHSWSDPRAIQGRG K LNESES+  LN   ENLT+LVMRSMTQQNTVGAS GKANV
Subjt:  EIETYYNGLDDATHLVIDASANGALLEKPYTEAFNILERISSNNHSWSDPRAIQGRGRKRLNESESFTVLN--CENLTDLVMRSMTQQNTVGASAGKANV

Query:  SHIQGISYSFCEGDHHYNNCPDNPESM-RISDGCTDGSDSSSNGSNDG--------GSGDSGSNNGGLRN
        SHIQGIS SFCEG+HHYNN PDNPES+  + +   +G +S SN  N G         SG+ G NN G  N
Subjt:  SHIQGISYSFCEGDHHYNNCPDNPESM-RISDGCTDGSDSSSNGSNDG--------GSGDSGSNNGGLRN

XP_022159060.1 uncharacterized protein LOC111025500 [Momordica charantia]1.1e-4881.1Show/hide
Query:  EIETYYNGLDDATHLVIDASANGALLEKPYTEAFNILERISSNNHSWSDPRAIQGRGRKRLNESESFTVLN--CENLTDLVMRSMTQQNTVGASAGKANV
        +I+TYYNGLDDAT LVIDASANGALL KPY EAFNILERISSNN SWSDPRAI G+G K  NESESFT LN   ENLTDLVMRSMT Q+TVGASAGKANV
Subjt:  EIETYYNGLDDATHLVIDASANGALLEKPYTEAFNILERISSNNHSWSDPRAIQGRGRKRLNESESFTVLN--CENLTDLVMRSMTQQNTVGASAGKANV

Query:  SHIQGISYSFCEGDHHYNNCPDNPESM
        SHIQGIS SFC G++ YNNCP NPES+
Subjt:  SHIQGISYSFCEGDHHYNNCPDNPESM

TrEMBL top hitse value%identityAlignment
A0A6J1DAK9 uncharacterized protein LOC1110189101.6e-3762.11Show/hide
Query:  IETYYNGLDDATHLVIDASANGALLEKPYTEAFNILERISSNNHSWSDPRAIQGRGRKRLNESESFTVLN--CENLTDLVMRSMTQQNTVGASAGKANVS
        IE YYNGLDDAT LV   S N ALL KPY EAFNILERISSN HS SD RAIQGRG KRLNES+S++  N   EN+ DLV RSMTQQ+TVGA  GKAN S
Subjt:  IETYYNGLDDATHLVIDASANGALLEKPYTEAFNILERISSNNHSWSDPRAIQGRGRKRLNESESFTVLN--CENLTDLVMRSMTQQNTVGASAGKANVS

Query:  HIQGISYSFCEGDHHYNNCPDNPESMRISDGCTDGSDSSSNGSNDGGSGDSGSNNGGLRNN
        H QG SYSF  G HHYNNCP NPES+     C   + +S N S       S + N G RN+
Subjt:  HIQGISYSFCEGDHHYNNCPDNPESMRISDGCTDGSDSSSNGSNDGGSGDSGSNNGGLRNN

A0A6J1DAK9 uncharacterized protein LOC1110189109.0e-0475.76Show/hide
Query:  MNSPNPNMRQPIPPNVRIEEIVDGVLVAVDPEI
        MN PNPN+ QPIPPNVRIEEIVDGV VA + E+
Subjt:  MNSPNPNMRQPIPPNVRIEEIVDGVLVAVDPEI

A0A6J1DAK9 uncharacterized protein LOC1110189101.1e-2866.06Show/hide
Query:  EAFNILERISSNNHSWSDPRAIQGRGRKRLNESESFTVLN--CENLTDLVMRSMTQQNTVGASAGKANVSHIQGISYSFCEGDHHYNNCPDNPESMRISD
        EAFNILERISSNNHSW DP+A+QG+  K L ESES+T LN   ENLTDLVMRS+TQQ+  GAS G  NV+ IQGIS SF EGDHHYNNCP NPES     
Subjt:  EAFNILERISSNNHSWSDPRAIQGRGRKRLNESESFTVLN--CENLTDLVMRSMTQQNTVGASAGKANVSHIQGISYSFCEGDHHYNNCPDNPESMRISD

Query:  GCTDGSDSS
        G   G+ ++
Subjt:  GCTDGSDSS

A0A6J1DDA0 uncharacterized protein LOC1110194291.9e-2255.56Show/hide
Query:  EIETYYNGLDDATHLVIDASANGALLEKPYTEAFNILERISSNNHSWSDPRAIQGRGRKRLNESESFTVLN--CENLTDLVMRSMTQQNTVGASAGKANV
        +IETYYNGLDDAT LVIDASANG+                             +G+G   LNESESFT LN   ENLTDLVMRSMTQQN V ASA KANV
Subjt:  EIETYYNGLDDATHLVIDASANGALLEKPYTEAFNILERISSNNHSWSDPRAIQGRGRKRLNESESFTVLN--CENLTDLVMRSMTQQNTVGASAGKANV

Query:  SHIQGISYSFCEGDHHYNNCPDNPES
        S+IQGI  S C+G+H++N+CP N  S
Subjt:  SHIQGISYSFCEGDHHYNNCPDNPES

A0A6J1DRG1 uncharacterized protein LOC1110236696.4e-5070Show/hide
Query:  EIETYYNGLDDATHLVIDASANGALLEKPYTEAFNILERISSNNHSWSDPRAIQGRGRKRLNESESFTVLN--CENLTDLVMRSMTQQNTVGASAGKANV
        +IE YY GLDDAT LVIDAS NGALL KPY EAFNILERISSNNHSWSDPRAIQGRG K LNESES+  LN   ENLT+LVMRSMTQQNTVGAS GKANV
Subjt:  EIETYYNGLDDATHLVIDASANGALLEKPYTEAFNILERISSNNHSWSDPRAIQGRGRKRLNESESFTVLN--CENLTDLVMRSMTQQNTVGASAGKANV

Query:  SHIQGISYSFCEGDHHYNNCPDNPESM-RISDGCTDGSDSSSNGSNDG--------GSGDSGSNNGGLRN
        SHIQGIS SFCEG+HHYNN PDNPES+  + +   +G +S SN  N G         SG+ G NN G  N
Subjt:  SHIQGISYSFCEGDHHYNNCPDNPESM-RISDGCTDGSDSSSNGSNDG--------GSGDSGSNNGGLRN

A0A6J1DXK5 uncharacterized protein LOC1110255005.4e-4981.1Show/hide
Query:  EIETYYNGLDDATHLVIDASANGALLEKPYTEAFNILERISSNNHSWSDPRAIQGRGRKRLNESESFTVLN--CENLTDLVMRSMTQQNTVGASAGKANV
        +I+TYYNGLDDAT LVIDASANGALL KPY EAFNILERISSNN SWSDPRAI G+G K  NESESFT LN   ENLTDLVMRSMT Q+TVGASAGKANV
Subjt:  EIETYYNGLDDATHLVIDASANGALLEKPYTEAFNILERISSNNHSWSDPRAIQGRGRKRLNESESFTVLN--CENLTDLVMRSMTQQNTVGASAGKANV

Query:  SHIQGISYSFCEGDHHYNNCPDNPESM
        SHIQGIS SFC G++ YNNCP NPES+
Subjt:  SHIQGISYSFCEGDHHYNNCPDNPESM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCACCCAACCCGAATATGCGTCAACCTATTCCGCCGAATGTAAGGATCGAGGAAATAGTAGATGGGGTTCTTGTTGCTGTTGACCCTGAGATCGAAACGTATTA
CAATGGTTTGGACGATGCCACCCATCTTGTCATCGATGCGTCAGCAAATGGGGCTTTGCTAGAAAAACCTTATACTGAAGCATTCAACATCTTGGAAAGGATATCGTCCA
ACAATCATTCATGGTCTGACCCTAGAGCCATCCAAGGAAGAGGAAGAAAGCGATTGAATGAATCAGAGTCTTTCACCGTCTTAAATTGTGAGAATTTGACAGATTTGGTT
ATGAGGAGTATGACGCAGCAAAACACAGTGGGAGCATCTGCTGGTAAGGCAAATGTTAGCCACATCCAAGGGATTTCTTACTCTTTTTGTGAAGGAGATCACCATTACAA
CAATTGCCCTGACAATCCAGAGTCGATGCGGATCAGTGACGGCTGCACTGATGGAAGCGATAGTAGTAGCAACGGTAGCAACGACGGCGGTAGTGGTGACAGCGGTAGCA
ACAACGGCGGGCTAAGGAACAATGAGGATGTAGTCGATCTCCAATTGCTCAAAGAAAATCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATTCACCCAACCCGAATATGCGTCAACCTATTCCGCCGAATGTAAGGATCGAGGAAATAGTAGATGGGGTTCTTGTTGCTGTTGACCCTGAGATCGAAACGTATTA
CAATGGTTTGGACGATGCCACCCATCTTGTCATCGATGCGTCAGCAAATGGGGCTTTGCTAGAAAAACCTTATACTGAAGCATTCAACATCTTGGAAAGGATATCGTCCA
ACAATCATTCATGGTCTGACCCTAGAGCCATCCAAGGAAGAGGAAGAAAGCGATTGAATGAATCAGAGTCTTTCACCGTCTTAAATTGTGAGAATTTGACAGATTTGGTT
ATGAGGAGTATGACGCAGCAAAACACAGTGGGAGCATCTGCTGGTAAGGCAAATGTTAGCCACATCCAAGGGATTTCTTACTCTTTTTGTGAAGGAGATCACCATTACAA
CAATTGCCCTGACAATCCAGAGTCGATGCGGATCAGTGACGGCTGCACTGATGGAAGCGATAGTAGTAGCAACGGTAGCAACGACGGCGGTAGTGGTGACAGCGGTAGCA
ACAACGGCGGGCTAAGGAACAATGAGGATGTAGTCGATCTCCAATTGCTCAAAGAAAATCAGTAA
Protein sequenceShow/hide protein sequence
MNSPNPNMRQPIPPNVRIEEIVDGVLVAVDPEIETYYNGLDDATHLVIDASANGALLEKPYTEAFNILERISSNNHSWSDPRAIQGRGRKRLNESESFTVLNCENLTDLV
MRSMTQQNTVGASAGKANVSHIQGISYSFCEGDHHYNNCPDNPESMRISDGCTDGSDSSSNGSNDGGSGDSGSNNGGLRNNEDVVDLQLLKENQ