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Moc09g10430 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g10430
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationchr9:8806840..8809603
RNA-Seq ExpressionMoc09g10430
SyntenyMoc09g10430
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8701634.1 hypothetical protein F3Y22_tig00110528pilonHSYRG00093 [Hibiscus syriacus]1.1e-1137.84Show/hide
Query:  NLEDNFWDISVPLPS---PT----------------------CLDFASPSMPSIETVQSGGEILQNDFANPSSKLKFYTRRKFNQRNQDQIVIPSQSQSE
        ++EDNFWDIS+PLP+   PT                      CL      +P+    +SG E+LQ +  + +S+L+FYTR++F+ RN+D  +  +++QSE
Subjt:  NLEDNFWDISVPLPS---PT----------------------CLDFASPSMPSIETVQSGGEILQNDFANPSSKLKFYTRRKFNQRNQDQIVIPSQSQSE

Query:  TPRNETELSDNP-PSSTLSGNPSSSNFQNNSPVVSDLDVPIAIRKGMR
           +  E   NP P++ L     SS   NNSP + DLDVPIA+RKG+R
Subjt:  TPRNETELSDNP-PSSTLSGNPSSSNFQNNSPVVSDLDVPIAIRKGMR

TYK29009.1 ATP-dependent DNA helicase-like protein RECG [Cucumis melo var. makuwa]2.6e-1047.06Show/hide
Query:  SPSMPSIETVQSGGEILQNDFAN--PSSKLKFYTRRKFNQRNQDQIVIPSQSQSETPRNETELSDNPPSSTLSGNPSSSNFQNNSPVVSDLDVPIAIRKG
        +P +PS++   SG EILQND  +  P  + KFY RRKFNQRNQDQ+   SQ+Q E   NE E   NP + + S   +  N   +  +V DLDVP AIR+G
Subjt:  SPSMPSIETVQSGGEILQNDFAN--PSSKLKFYTRRKFNQRNQDQIVIPSQSQSETPRNETELSDNPPSSTLSGNPSSSNFQNNSPVVSDLDVPIAIRKG

Query:  MR
        +R
Subjt:  MR

XP_028067006.1 uncharacterized protein LOC114269855 [Camellia sinensis]3.3e-0545Show/hide
Query:  SPSMPSIETVQSGGEILQNDFANPSSKLKFYTRRKFNQRNQDQIVIPSQSQSETPRNETELSDNPPSSTLSGNPSSSNFQNNSPVVSDLDVPIAIRKGMR
        S  +PS E   SGGEILQ D  + +SKL+ YTR++F+ RN D  V  S S +ET                SGNP         P +SDLDVPIAIRKG+R
Subjt:  SPSMPSIETVQSGGEILQNDFANPSSKLKFYTRRKFNQRNQDQIVIPSQSQSETPRNETELSDNPPSSTLSGNPSSSNFQNNSPVVSDLDVPIAIRKGMR

XP_039014820.1 LOW QUALITY PROTEIN: uncharacterized protein LOC120144958 [Hibiscus syriacus]4.5e-1045.92Show/hide
Query:  MPSIETVQSGGEILQNDFANPSSKLKFYTRRKFNQRNQDQIVIPSQSQSETPRNETELSDNP-PSSTLSGNPSSSNFQNNSPVVSDLDVPIAIRKGMR
        +P+    +SGGE+LQ +  + +S+L+FYTR++F+ RN+D  + P+Q+QSE   +  E S NP P++ L     SS   NNSP + DLDVPIA+RKG+R
Subjt:  MPSIETVQSGGEILQNDFANPSSKLKFYTRRKFNQRNQDQIVIPSQSQSETPRNETELSDNP-PSSTLSGNPSSSNFQNNSPVVSDLDVPIAIRKGMR

TrEMBL top hitse value%identityAlignment
A0A2N9G304 Reverse transcriptase Ty1/copia-type domain-containing protein8.3e-1038Show/hide
Query:  EDNFWDISVPLPSPTCLDFASPS-------MPSIE-TVQSGG-----------EILQNDFANPSSKLKFYTRRKFNQRNQDQIVIPSQSQSETPRN-ETE
        EDNFW+ S PLP+ T +DF S          P IE ++Q  G           EILQ D  NP+S+L  YTR++  +R++D  +IP Q+QSE+  N    
Subjt:  EDNFWDISVPLPSPTCLDFASPS-------MPSIE-TVQSGG-----------EILQNDFANPSSKLKFYTRRKFNQRNQDQIVIPSQSQSETPRN-ETE

Query:  LSDNPPSSTLSGNP----SSSNFQNNSPVV------SDLDVPIAIRKGMR
        +S N     +  N     SS+   ++ P++      SDLD+PIAIRKG+R
Subjt:  LSDNPPSSTLSGNP----SSSNFQNNSPVV------SDLDVPIAIRKGMR

A0A2N9GKJ5 Uncharacterized protein8.3e-1038Show/hide
Query:  EDNFWDISVPLPSPTCLDFASPS-------MPSIE-TVQSGG-----------EILQNDFANPSSKLKFYTRRKFNQRNQDQIVIPSQSQSETPRNE-TE
        EDNFW+ S PLP+ T +DF+S          P IE ++Q  G           EILQ D  NP+S+L  YTR++  +R++D  +IP Q+QSE+  N    
Subjt:  EDNFWDISVPLPSPTCLDFASPS-------MPSIE-TVQSGG-----------EILQNDFANPSSKLKFYTRRKFNQRNQDQIVIPSQSQSETPRNE-TE

Query:  LSDNPPSSTLSGNP----SSSNFQNNSPVV------SDLDVPIAIRKGMR
        +S N     +  N     SS+   ++ P++      SDLD+PIAIRKG+R
Subjt:  LSDNPPSSTLSGNP----SSSNFQNNSPVV------SDLDVPIAIRKGMR

A0A2N9GQ49 Uncharacterized protein8.3e-1038Show/hide
Query:  EDNFWDISVPLPSPTCLDFASPS-------MPSIE-TVQSGG-----------EILQNDFANPSSKLKFYTRRKFNQRNQDQIVIPSQSQSETPRN-ETE
        EDNFW+ S PLP+ T +DF S          P IE ++Q  G           EILQ D  NP+S+L  YTR++  +R++D  +IP Q+QSE+  N    
Subjt:  EDNFWDISVPLPSPTCLDFASPS-------MPSIE-TVQSGG-----------EILQNDFANPSSKLKFYTRRKFNQRNQDQIVIPSQSQSETPRN-ETE

Query:  LSDNPPSSTLSGNP----SSSNFQNNSPVV------SDLDVPIAIRKGMR
        +S N     +  N     SS+   ++ P++      SDLD+PIAIRKG+R
Subjt:  LSDNPPSSTLSGNP----SSSNFQNNSPVV------SDLDVPIAIRKGMR

A0A5D3E016 ATP-dependent DNA helicase-like protein RECG1.3e-1047.06Show/hide
Query:  SPSMPSIETVQSGGEILQNDFAN--PSSKLKFYTRRKFNQRNQDQIVIPSQSQSETPRNETELSDNPPSSTLSGNPSSSNFQNNSPVVSDLDVPIAIRKG
        +P +PS++   SG EILQND  +  P  + KFY RRKFNQRNQDQ+   SQ+Q E   NE E   NP + + S   +  N   +  +V DLDVP AIR+G
Subjt:  SPSMPSIETVQSGGEILQNDFAN--PSSKLKFYTRRKFNQRNQDQIVIPSQSQSETPRNETELSDNPPSSTLSGNPSSSNFQNNSPVVSDLDVPIAIRKG

Query:  MR
        +R
Subjt:  MR

A0A6A3AAZ5 Uncharacterized protein5.2e-1237.84Show/hide
Query:  NLEDNFWDISVPLPS---PT----------------------CLDFASPSMPSIETVQSGGEILQNDFANPSSKLKFYTRRKFNQRNQDQIVIPSQSQSE
        ++EDNFWDIS+PLP+   PT                      CL      +P+    +SG E+LQ +  + +S+L+FYTR++F+ RN+D  +  +++QSE
Subjt:  NLEDNFWDISVPLPS---PT----------------------CLDFASPSMPSIETVQSGGEILQNDFANPSSKLKFYTRRKFNQRNQDQIVIPSQSQSE

Query:  TPRNETELSDNP-PSSTLSGNPSSSNFQNNSPVVSDLDVPIAIRKGMR
           +  E   NP P++ L     SS   NNSP + DLDVPIA+RKG+R
Subjt:  TPRNETELSDNP-PSSTLSGNPSSSNFQNNSPVVSDLDVPIAIRKGMR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTTGGAAGATAATTTTTGGGATATTTCTGTTCCCCTTCCTAGTCCTACCTGTTTGGATTTTGCTAGTCCTTCGATGCCAAGCATAGAAACTGTCCAATCAGGGGG
AGAAATACTACAAAACGATTTTGCGAATCCTAGTTCTAAGTTAAAGTTTTATACTAGAAGGAAATTCAATCAGAGGAACCAAGATCAAATAGTTATTCCTTCACAAAGCC
AATCTGAAACTCCGAGAAATGAAACTGAACTGTCTGATAATCCTCCCTCTTCAACATTGTCTGGTAATCCCTCTTCTTCAAATTTTCAAAATAATTCACCTGTTGTCTCT
GACCTTGATGTTCCCATAGCCATTAGAAAAGGAATGAGGAGGAAATGCAGGCCAAATCAAGCTTTTGAATCTCCCAAATCAGCCAAAATGATGGAAATATCAAACTGCCA
GTGGAGTAACCATGTGAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATTTGGAAGATAATTTTTGGGATATTTCTGTTCCCCTTCCTAGTCCTACCTGTTTGGATTTTGCTAGTCCTTCGATGCCAAGCATAGAAACTGTCCAATCAGGGGG
AGAAATACTACAAAACGATTTTGCGAATCCTAGTTCTAAGTTAAAGTTTTATACTAGAAGGAAATTCAATCAGAGGAACCAAGATCAAATAGTTATTCCTTCACAAAGCC
AATCTGAAACTCCGAGAAATGAAACTGAACTGTCTGATAATCCTCCCTCTTCAACATTGTCTGGTAATCCCTCTTCTTCAAATTTTCAAAATAATTCACCTGTTGTCTCT
GACCTTGATGTTCCCATAGCCATTAGAAAAGGAATGAGGAGGAAATGCAGGCCAAATCAAGCTTTTGAATCTCCCAAATCAGCCAAAATGATGGAAATATCAAACTGCCA
GTGGAGTAACCATGTGAAGTAA
Protein sequenceShow/hide protein sequence
MNLEDNFWDISVPLPSPTCLDFASPSMPSIETVQSGGEILQNDFANPSSKLKFYTRRKFNQRNQDQIVIPSQSQSETPRNETELSDNPPSSTLSGNPSSSNFQNNSPVVS
DLDVPIAIRKGMRRKCRPNQAFESPKSAKMMEISNCQWSNHVK