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Moc09g10460 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g10460
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionZinc knuckle (CCHC-type) family protein
Genome locationchr9:8845193..8845528
RNA-Seq ExpressionMoc09g10460
SyntenyMoc09g10460
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4289235.1 unnamed protein product [Prunus armeniaca]2.4e-0540.38Show/hide
Query:  KRLNGRRGLGYVDESVIPSSSNTIFVKAFSIVHNDVLSNVALKCDVHQHYVSKFVPNHFRSKFKCMHNTILVSICHYCGVKSHIRPNCFRLRNDQNRFPK
        K    +RGLGY+ ES  PSS  TIFVK  S      L +    C    + VSK   +  +SKF        V  CH+CGVK HIRP C  L   ++R  K
Subjt:  KRLNGRRGLGYVDESVIPSSSNTIFVKAFSIVHNDVLSNVALKCDVHQHYVSKFVPNHFRSKFKCMHNTILVSICHYCGVKSHIRPNCFRLRNDQNRFPK

Query:  RNDF
         N+F
Subjt:  RNDF

CAB4308045.1 unnamed protein product [Prunus armeniaca]7.8e-0440.86Show/hide
Query:  KRLNGRRGLGYVDESVIPSSSNTIFVKAFSIVH-NDVLSNVALKCDVHQHYVSKFVPNHFRSKFKCMHNTILVSICHYCGVKSHIRPNCFRLR
        K    +RGLGY+DES  PSS  TIFVK  S       + ++ L  D   + +SK   +  +SKF        V  CH+CGVK HIR  C  LR
Subjt:  KRLNGRRGLGYVDESVIPSSSNTIFVKAFSIVH-NDVLSNVALKCDVHQHYVSKFVPNHFRSKFKCMHNTILVSICHYCGVKSHIRPNCFRLR

KAG5548243.1 hypothetical protein RHGRI_013820 [Rhododendron griersonianum]7.8e-0438.64Show/hide
Query:  RRGLGYVDESVI-PSSSNTIFVKAFSIVHNDVLSNVALK-CDVHQHYVSKFVPNHFRSKFKCMHNTILVSICHYCGVKSHIRPNCFRL
        + GLG+   S+  P  S  I VK   + H   + N+A K  DV +  V+KFVP                  CHYC VK HIRPNCF+L
Subjt:  RRGLGYVDESVI-PSSSNTIFVKAFSIVHNDVLSNVALK-CDVHQHYVSKFVPNHFRSKFKCMHNTILVSICHYCGVKSHIRPNCFRL

KAG5548244.1 hypothetical protein RHGRI_013820 [Rhododendron griersonianum]7.8e-0438.64Show/hide
Query:  RRGLGYVDESVI-PSSSNTIFVKAFSIVHNDVLSNVALK-CDVHQHYVSKFVPNHFRSKFKCMHNTILVSICHYCGVKSHIRPNCFRL
        + GLG+   S+  P  S  I VK   + H   + N+A K  DV +  V+KFVP                  CHYC VK HIRPNCF+L
Subjt:  RRGLGYVDESVI-PSSSNTIFVKAFSIVHNDVLSNVALK-CDVHQHYVSKFVPNHFRSKFKCMHNTILVSICHYCGVKSHIRPNCFRL

XP_031741720.1 uncharacterized protein LOC116403915 [Cucumis sativus]5.9e-1244.04Show/hide
Query:  KRLNGRRGLGYVDESVIPSSSNTIFVKAFSIVHNDVLSNVALKCDVHQHYVSKFVPNHFRSKFKCMHNTILVSICHYCGVKSHIRPNCFRLRNDQNRFPK
        K    +RGLGY+DES  PSSS T FVKA  IV    +SN               V NH +S F        V ICH CGV+ HIRP CF+L+  QN + +
Subjt:  KRLNGRRGLGYVDESVIPSSSNTIFVKAFSIVHNDVLSNVALKCDVHQHYVSKFVPNHFRSKFKCMHNTILVSICHYCGVKSHIRPNCFRLRNDQNRFPK

Query:  RNDFYKAKF
        RN   +AKF
Subjt:  RNDFYKAKF

TrEMBL top hitse value%identityAlignment
A0A5H2XMX4 Transposable element protein (Fragment)3.8e-0439.05Show/hide
Query:  KRLNGRRGLGYVDESVIPSSSNTIFVKAFSIVH-NDVLSNVALKCDVHQHYVSKFVPNHFRSKFKCMHNTILVSICHYCGVKSHIRPNCFRLRNDQNRFP
        K    +RGLGY++ES  PSS  TIFVK  S       +  + L  D   + VSK   +  +SKF        V  CH+CGVK HIRP C  LR  +++  
Subjt:  KRLNGRRGLGYVDESVIPSSSNTIFVKAFSIVH-NDVLSNVALKCDVHQHYVSKFVPNHFRSKFKCMHNTILVSICHYCGVKSHIRPNCFRLRNDQNRFP

Query:  KRNDF
        K ++F
Subjt:  KRNDF

A0A6J5X7S2 Uncharacterized protein3.8e-0440.86Show/hide
Query:  KRLNGRRGLGYVDESVIPSSSNTIFVKAFSIVH-NDVLSNVALKCDVHQHYVSKFVPNHFRSKFKCMHNTILVSICHYCGVKSHIRPNCFRLR
        K    +RGLGY+DES  PSS  TIFVK  S       + ++ L  D   + +SK   +  +SKF        V  CH+CGVK HIR  C  LR
Subjt:  KRLNGRRGLGYVDESVIPSSSNTIFVKAFSIVH-NDVLSNVALKCDVHQHYVSKFVPNHFRSKFKCMHNTILVSICHYCGVKSHIRPNCFRLR

A0A6J5Y4S2 Uncharacterized protein1.2e-0540.38Show/hide
Query:  KRLNGRRGLGYVDESVIPSSSNTIFVKAFSIVHNDVLSNVALKCDVHQHYVSKFVPNHFRSKFKCMHNTILVSICHYCGVKSHIRPNCFRLRNDQNRFPK
        K    +RGLGY+ ES  PSS  TIFVK  S      L +    C    + VSK   +  +SKF        V  CH+CGVK HIRP C  L   ++R  K
Subjt:  KRLNGRRGLGYVDESVIPSSSNTIFVKAFSIVHNDVLSNVALKCDVHQHYVSKFVPNHFRSKFKCMHNTILVSICHYCGVKSHIRPNCFRLRNDQNRFPK

Query:  RNDF
         N+F
Subjt:  RNDF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G05360.1 Zinc knuckle (CCHC-type) family protein3.7e-0453.33Show/hide
Query:  ICHYCGVKSHIRPNCFRLRNDQNRFPKRND
        +CH+CGV  HIRP CFRL  ++NR     D
Subjt:  ICHYCGVKSHIRPNCFRLRNDQNRFPKRND


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCAAACGGTTAAATGGCAGAAGAGGACTTGGTTATGTCGATGAGAGTGTTATTCCATCTAGTTCCAATACAATTTTTGTTAAAGCATTTTCTATTGTGCATAATGA
TGTTTTGTCTAATGTTGCTCTGAAATGTGATGTGCATCAACATTATGTATCTAAATTTGTGCCTAATCATTTTCGTTCTAAGTTTAAATGTATGCATAATACAATACTCG
TGTCAATATGTCATTATTGTGGTGTTAAAAGTCATATTAGACCAAATTGCTTTAGATTGAGAAATGATCAAAATAGATTTCCTAAGAGAAATGATTTTTATAAAGCGAAA
TTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGCAAACGGTTAAATGGCAGAAGAGGACTTGGTTATGTCGATGAGAGTGTTATTCCATCTAGTTCCAATACAATTTTTGTTAAAGCATTTTCTATTGTGCATAATGA
TGTTTTGTCTAATGTTGCTCTGAAATGTGATGTGCATCAACATTATGTATCTAAATTTGTGCCTAATCATTTTCGTTCTAAGTTTAAATGTATGCATAATACAATACTCG
TGTCAATATGTCATTATTGTGGTGTTAAAAGTCATATTAGACCAAATTGCTTTAGATTGAGAAATGATCAAAATAGATTTCCTAAGAGAAATGATTTTTATAAAGCGAAA
TTTTAA
Protein sequenceShow/hide protein sequence
MCKRLNGRRGLGYVDESVIPSSSNTIFVKAFSIVHNDVLSNVALKCDVHQHYVSKFVPNHFRSKFKCMHNTILVSICHYCGVKSHIRPNCFRLRNDQNRFPKRNDFYKAK
F