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Moc09g10570 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g10570
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationchr9:8978470..8979040
RNA-Seq ExpressionMoc09g10570
SyntenyMoc09g10570
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN83561.1 hypothetical protein VITISV_024106 [Vitis vinifera]3.6e-1843.33Show/hide
Query:  MDEQRVVHVASSFSCKAERLLILYLSLPLGGNPKLDAFRSPIQERISKKLGIWMREAGGLGIDCVLKRNKCLLSKWGWRFSVEISTLWHMVVASLYGYDH
        +D+  +  +A    CKA    ILYL LPLGGNPK   F  P+ ERISK      +  GGLG+  +  RN  LL KW WR+  E S LWH V+ S+YG   
Subjt:  MDEQRVVHVASSFSCKAERLLILYLSLPLGGNPKLDAFRSPIQERISKKLGIWMREAGGLGIDCVLKRNKCLLSKWGWRFSVEISTLWHMVVASLYGYDH

Query:  FGWNAVPKIHGSSRIPWNNI
         GW+A   +  S R  W  I
Subjt:  FGWNAVPKIHGSSRIPWNNI

RVW51280.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]1.0e-1740.91Show/hide
Query:  MDEQRVVHVASSFSCKAERLLILYLSLPLGGNPKLDAFRSPIQERISK-------KLGIW-----MREAGGLGIDCVLKRNKCLLSKWGWRFSVEISTLW
        +D+  +  +A    CKA    ILYL LPLGGNPK   F  P+ ERIS+        L  W      +  GGLG+  +  RN  LL KW WR+  E S LW
Subjt:  MDEQRVVHVASSFSCKAERLLILYLSLPLGGNPKLDAFRSPIQERISK-------KLGIW-----MREAGGLGIDCVLKRNKCLLSKWGWRFSVEISTLW

Query:  HMVVASLYGYDHFGWNAVPKIHGSSRIPWNNI
        H V+ S+YG    GW+A   +  S R PW  I
Subjt:  HMVVASLYGYDHFGWNAVPKIHGSSRIPWNNI

RVW75038.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]1.0e-1735.62Show/hide
Query:  MDEQRVVHVASSFSCKAERLLILYLSLPLGGNPKLDAFRSPIQERISKKLGIWM--------------------------REAGGLGIDCVLKRNKCLLS
        +++  +  +A    CKA    ILYL LPLGGNPK   F  P+ ERIS++L  W                           +  GGLG   +  RN  LL 
Subjt:  MDEQRVVHVASSFSCKAERLLILYLSLPLGGNPKLDAFRSPIQERISKKLGIWM--------------------------REAGGLGIDCVLKRNKCLLS

Query:  KWGWRFSVEISTLWHMVVASLYGYDHFGWNAVPKIHGSSRIPWNNI
        KW WR+  E S LWH V+ S+YG    GW+    +  S R PW  I
Subjt:  KWGWRFSVEISTLWHMVVASLYGYDHFGWNAVPKIHGSSRIPWNNI

RVW90395.1 hypothetical protein CK203_045762 [Vitis vinifera]1.0e-1740.91Show/hide
Query:  MDEQRVVHVASSFSCKAERLLILYLSLPLGGNPKLDAFRSPIQERISK-------KLGIW-----MREAGGLGIDCVLKRNKCLLSKWGWRFSVEISTLW
        +D+  +  +A    CKA    ILYL LPLGGNPK   F  P+ ERIS+        L  W      +  GGLG+  +  RN  LL KW WR+  E S LW
Subjt:  MDEQRVVHVASSFSCKAERLLILYLSLPLGGNPKLDAFRSPIQERISK-------KLGIW-----MREAGGLGIDCVLKRNKCLLSKWGWRFSVEISTLW

Query:  HMVVASLYGYDHFGWNAVPKIHGSSRIPWNNI
        H V+ S+YG    GW+A   +  S R PW  I
Subjt:  HMVVASLYGYDHFGWNAVPKIHGSSRIPWNNI

RVX22996.1 putative mitochondrial protein [Vitis vinifera]3.6e-1841.67Show/hide
Query:  MDEQRVVHVASSFSCKAERLLILYLSLPLGGNPKLDAFRSPIQERISK-------KLGIW-----MREAGGLGIDCVLKRNKCLLSKWGWRFSVEISTLW
        +D+  +  +A    CKA   LILYL LPLGGNPK   F  P+ ERIS+        L  W      +  GGLG+  +  RN  LL KW WR+  E S LW
Subjt:  MDEQRVVHVASSFSCKAERLLILYLSLPLGGNPKLDAFRSPIQERISK-------KLGIW-----MREAGGLGIDCVLKRNKCLLSKWGWRFSVEISTLW

Query:  HMVVASLYGYDHFGWNAVPKIHGSSRIPWNNI
        H V+ S+YG    GW+A   +  S R PW  I
Subjt:  HMVVASLYGYDHFGWNAVPKIHGSSRIPWNNI

TrEMBL top hitse value%identityAlignment
A0A438G251 Putative ribonuclease H protein7.3e-1732.72Show/hide
Query:  MDEQRVVHVASSFSCKAERLLILYLSLPLGGNPKLDAFRSPIQERISKKLGIWM----------------------------------------REAGGL
        +D   +  +A +  CKA    ILYL LPLGGNP+   F  P+ ERIS++L  W                                         +E GGL
Subjt:  MDEQRVVHVASSFSCKAERLLILYLSLPLGGNPKLDAFRSPIQERISKKLGIWM----------------------------------------REAGGL

Query:  GIDCVLKRNKCLLSKWGWRFSVEISTLWHMVVASLYGYDHFGWNAVPKIHGSSRIPWNNINE
            +  RN  LL KW WR+  E S LWH V+ S+YG    GW+A   +  S R PW  I++
Subjt:  GIDCVLKRNKCLLSKWGWRFSVEISTLWHMVVASLYGYDHFGWNAVPKIHGSSRIPWNNINE

A0A438GS85 LINE-1 retrotransposable element ORF2 protein5.1e-1835.62Show/hide
Query:  MDEQRVVHVASSFSCKAERLLILYLSLPLGGNPKLDAFRSPIQERISKKLGIWM--------------------------REAGGLGIDCVLKRNKCLLS
        +++  +  +A    CKA    ILYL LPLGGNPK   F  P+ ERIS++L  W                           +  GGLG   +  RN  LL 
Subjt:  MDEQRVVHVASSFSCKAERLLILYLSLPLGGNPKLDAFRSPIQERISKKLGIWM--------------------------REAGGLGIDCVLKRNKCLLS

Query:  KWGWRFSVEISTLWHMVVASLYGYDHFGWNAVPKIHGSSRIPWNNI
        KW WR+  E S LWH V+ S+YG    GW+    +  S R PW  I
Subjt:  KWGWRFSVEISTLWHMVVASLYGYDHFGWNAVPKIHGSSRIPWNNI

A0A438HBI4 Transposon TX1 uncharacterized 149 kDa protein2.5e-1733.75Show/hide
Query:  MDEQRVVHVASSFSCKAERLLILYLSLPLGGNPKLDAFRSPIQERISKKLGIWM----------------------------------------REAGGL
        +D+  +  +A +  CKA    ILYL LPLGGNP++  F  P+ ERIS++L  W                                         +E GGL
Subjt:  MDEQRVVHVASSFSCKAERLLILYLSLPLGGNPKLDAFRSPIQERISKKLGIWM----------------------------------------REAGGL

Query:  GIDCVLKRNKCLLSKWGWRFSVEISTLWHMVVASLYGYDHFGWNAVPKIHGSSRIPWNNI
        G   +  RN  LL KW WR+  E S LWH V+ S+YG    GW+A   +  S R PW  I
Subjt:  GIDCVLKRNKCLLSKWGWRFSVEISTLWHMVVASLYGYDHFGWNAVPKIHGSSRIPWNNI

A0A438HTK2 LINE-1 retrotransposable element ORF2 protein5.1e-1835.29Show/hide
Query:  MDEQRVVHVASSFSCKAERLLILYLSLPLGGNPKLDAFRSPIQERISKKLGI------------WM-------------------REAGGLGIDCVLKRN
        +D   +  +A +  CKA    ILYL LPLGGNP+   F  P+ ERIS++L +            W                    +E GGLG   +  RN
Subjt:  MDEQRVVHVASSFSCKAERLLILYLSLPLGGNPKLDAFRSPIQERISKKLGI------------WM-------------------REAGGLGIDCVLKRN

Query:  KCLLSKWGWRFSVEISTLWHMVVASLYGYDHFGWNAVPKIHGSSRIPWNNINE
          LL KW WR+  E S LWH V+ S+YG    GW+A   +  S R PW  I++
Subjt:  KCLLSKWGWRFSVEISTLWHMVVASLYGYDHFGWNAVPKIHGSSRIPWNNINE

A0A438KJ67 Transposon TX1 uncharacterized 149 kDa protein5.6e-1736.43Show/hide
Query:  MDEQRVVHVASSFSCKAERLLILYLSLPLGGNPKLDAFRSPIQERISKKLGIWM--------------------REAGGLGIDCVLKRNKCLLSKWGWRF
        +++  +  +A    CKA    ILYL LPLG NPK  +F  P+ ERIS++L  W                     +  GGLG   +  RN  LL KW WR+
Subjt:  MDEQRVVHVASSFSCKAERLLILYLSLPLGGNPKLDAFRSPIQERISKKLGIWM--------------------REAGGLGIDCVLKRNKCLLSKWGWRF

Query:  SVEISTLWHMVVASLYGYDHFGWNAVPKIHGSSRIPWNNI
          E S LWH V+ S+YG    GW+    +  S R PW  I
Subjt:  SVEISTLWHMVVASLYGYDHFGWNAVPKIHGSSRIPWNNI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAACAAAGAGTGGTGCATGTTGCAAGTTCCTTTAGTTGTAAAGCTGAACGCCTTCTGATACTATATTTGAGCTTGCCATTAGGAGGGAATCCTAAACTTGATGC
CTTTCGGAGTCCAATACAAGAAAGAATCTCCAAGAAGCTCGGCATATGGATGAGGGAAGCCGGCGGTTTGGGTATTGATTGTGTCCTTAAGCGCAACAAATGCCTTTTAT
CCAAATGGGGCTGGCGGTTTAGTGTGGAGATTTCGACTTTATGGCATATGGTGGTGGCCAGTTTATATGGTTATGATCATTTTGGCTGGAACGCGGTGCCTAAGATTCAT
GGCTCGAGTCGTATTCCTTGGAACAATATTAACGAGCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGAACAAAGAGTGGTGCATGTTGCAAGTTCCTTTAGTTGTAAAGCTGAACGCCTTCTGATACTATATTTGAGCTTGCCATTAGGAGGGAATCCTAAACTTGATGC
CTTTCGGAGTCCAATACAAGAAAGAATCTCCAAGAAGCTCGGCATATGGATGAGGGAAGCCGGCGGTTTGGGTATTGATTGTGTCCTTAAGCGCAACAAATGCCTTTTAT
CCAAATGGGGCTGGCGGTTTAGTGTGGAGATTTCGACTTTATGGCATATGGTGGTGGCCAGTTTATATGGTTATGATCATTTTGGCTGGAACGCGGTGCCTAAGATTCAT
GGCTCGAGTCGTATTCCTTGGAACAATATTAACGAGCAATGA
Protein sequenceShow/hide protein sequence
MDEQRVVHVASSFSCKAERLLILYLSLPLGGNPKLDAFRSPIQERISKKLGIWMREAGGLGIDCVLKRNKCLLSKWGWRFSVEISTLWHMVVASLYGYDHFGWNAVPKIH
GSSRIPWNNINEQ