; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc09g10580 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g10580
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr9:8983267..8984058
RNA-Seq ExpressionMoc09g10580
SyntenyMoc09g10580
Gene Ontology termsGO:0008380 - RNA splicing (biological process)
GO:1900865 - chloroplast RNA modification (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR032867 - DYW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577831.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]8.3e-12986.85Show/hide
Query:  MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCM
        MYMKCGSVENGC+VFEHM++RDCVSWNAMIVGYAQNGFGN+ALG+FS+MLE GEKPDHVTMIGVL ACSHAGLLDEGRHYF+SM A+HGLV LKDHYTCM
Subjt:  MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCM

Query:  VDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWI
        VDLLGRAGCLEEAK+LIEEMPMQPDA++WGSLLAACKVHRNIKLGEYVVEKLLEVD E SGPYVLLSNMYAERGDWGNVVRIRKLMR+RGVVK PGCSWI
Subjt:  VDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWI

Query:  EIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVPYVVSNEIDEEE
        EIQG+LNVFMVKDK+H +K+EIY LLRTLL+QM+R GYVP+V ++EIDEE+
Subjt:  EIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVPYVVSNEIDEEE

KAG7015869.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]8.3e-12986.85Show/hide
Query:  MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCM
        MYMKCGSVENGC+VFEHM++RDCVSWNAMIVGYAQNGFGN+ALG+FS+MLE GEKPDHVTMIGVL ACSHAGLLDEGRHYF+SM A+HGLV LKDHYTCM
Subjt:  MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCM

Query:  VDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWI
        VDLLGRAGCLEEAK+LIEEMPMQPDA++WGSLLAACKVHRNIKLGEYVVEKLLEVD E SGPYVLLSNMYAERGDWGNVVRIRKLMR+RGVVK PGCSWI
Subjt:  VDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWI

Query:  EIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVPYVVSNEIDEEE
        EIQG+LNVFMVKDK+H +K+EIY LLRTLL+QM+R GYVP+V ++EIDEE+
Subjt:  EIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVPYVVSNEIDEEE

XP_022134814.1 pentatricopeptide repeat-containing protein At2g13600-like [Momordica charantia]4.4e-13081.27Show/hide
Query:  MYMKCGSVENGCKVFEHMVQR--------------------DCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHY
        MY KC  +     VF+HM  R                    +CVSWNAMIVGYAQNGFGNEALGVFSKMLE GEKPDHVTMIGVLCACSHAGLLDEGRHY
Subjt:  MYMKCGSVENGCKVFEHMVQR--------------------DCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHY

Query:  FQSMSAQHGLVSLKDHYTCMVDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVV
        F+SMSAQ+GLVSLKDHYTCMVDLLGRAGCLEEAKD+IEEMPMQPDA+IWGSLLAACKVHRNIKLGEYVVEKLLEVDAE SGPYVLLSNMYAERGDWGNVV
Subjt:  FQSMSAQHGLVSLKDHYTCMVDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVV

Query:  RIRKLMRKRGVVKHPGCSWIEIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVPYVVSNEIDEEEMKEHDNVLVLPN
        RIRKLMRKRGVVKHPGCSWIEIQGQ+NVFMVKD+++PKKKEIY LLRTLL+QMRR GYVPYV SNEIDEE+++EHDN L+L N
Subjt:  RIRKLMRKRGVVKHPGCSWIEIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVPYVVSNEIDEEEMKEHDNVLVLPN

XP_022159229.1 pentatricopeptide repeat-containing protein At2g13600-like [Momordica charantia]1.4e-152100Show/hide
Query:  MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCM
        MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCM
Subjt:  MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCM

Query:  VDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWI
        VDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWI
Subjt:  VDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWI

Query:  EIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVPYVVSNEIDEEEMKEHDNVLVLPN
        EIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVPYVVSNEIDEEEMKEHDNVLVLPN
Subjt:  EIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVPYVVSNEIDEEEMKEHDNVLVLPN

XP_022923215.1 pentatricopeptide repeat-containing protein At2g13600 [Cucurbita moschata]1.1e-12886.85Show/hide
Query:  MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCM
        MYMKCGSVENGC+VFEHM++RDCVSWNAMIVGYAQNGFGN+ALG+FS+MLE GEKPDHVTMIGVL ACSHAGLL+EGRHYF+SM A+HGLV LKDHYTCM
Subjt:  MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCM

Query:  VDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWI
        VDLLGRAGCLEEAK+LIEEMPMQPDA++WGSLLAACKVHRNIKLGEYVVEKLLEVD E SGPYVLLSNMYAERGDWGNVVRIRKLMR+RGVVK PGCSWI
Subjt:  VDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWI

Query:  EIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVPYVVSNEIDEEE
        EIQG+LNVFMVKDK+H +K+EIY LLRTLL+QM+R GYVPYV ++EIDEE+
Subjt:  EIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVPYVVSNEIDEEE

TrEMBL top hitse value%identityAlignment
A0A0A0KJ63 Uncharacterized protein2.8e-12282.47Show/hide
Query:  MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCM
        MYMKCGSVENGC+VF+HM+++DCVSWNAMIVGYAQNGFGN+AL VF KMLE GE PDHVTMIGVLCACSHAGLLDEGR+YF+SM+AQHGL+ LKDHYTCM
Subjt:  MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCM

Query:  VDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWI
        VDLLGRAG LEEAK+LIEEM MQPDA++WGSLLAACKVHRNI+LGEYVV+KLLEVD E SGPYVLLSNMYAE  DW NVVR+RKLMR+RGVVK PGCSWI
Subjt:  VDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWI

Query:  EIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVPYVVSNEIDEEE
        EIQG+LNVFMVKDK+H +KKEIY +LRT+L+QM++ GYVPYV SNE DE+E
Subjt:  EIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVPYVVSNEIDEEE

A0A6J1BZU9 pentatricopeptide repeat-containing protein At2g13600-like2.1e-13081.27Show/hide
Query:  MYMKCGSVENGCKVFEHMVQR--------------------DCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHY
        MY KC  +     VF+HM  R                    +CVSWNAMIVGYAQNGFGNEALGVFSKMLE GEKPDHVTMIGVLCACSHAGLLDEGRHY
Subjt:  MYMKCGSVENGCKVFEHMVQR--------------------DCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHY

Query:  FQSMSAQHGLVSLKDHYTCMVDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVV
        F+SMSAQ+GLVSLKDHYTCMVDLLGRAGCLEEAKD+IEEMPMQPDA+IWGSLLAACKVHRNIKLGEYVVEKLLEVDAE SGPYVLLSNMYAERGDWGNVV
Subjt:  FQSMSAQHGLVSLKDHYTCMVDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVV

Query:  RIRKLMRKRGVVKHPGCSWIEIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVPYVVSNEIDEEEMKEHDNVLVLPN
        RIRKLMRKRGVVKHPGCSWIEIQGQ+NVFMVKD+++PKKKEIY LLRTLL+QMRR GYVPYV SNEIDEE+++EHDN L+L N
Subjt:  RIRKLMRKRGVVKHPGCSWIEIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVPYVVSNEIDEEEMKEHDNVLVLPN

A0A6J1E1T7 pentatricopeptide repeat-containing protein At2g13600-like6.8e-153100Show/hide
Query:  MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCM
        MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCM
Subjt:  MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCM

Query:  VDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWI
        VDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWI
Subjt:  VDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWI

Query:  EIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVPYVVSNEIDEEEMKEHDNVLVLPN
        EIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVPYVVSNEIDEEEMKEHDNVLVLPN
Subjt:  EIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVPYVVSNEIDEEEMKEHDNVLVLPN

A0A6J1EB52 pentatricopeptide repeat-containing protein At2g136005.2e-12986.85Show/hide
Query:  MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCM
        MYMKCGSVENGC+VFEHM++RDCVSWNAMIVGYAQNGFGN+ALG+FS+MLE GEKPDHVTMIGVL ACSHAGLL+EGRHYF+SM A+HGLV LKDHYTCM
Subjt:  MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCM

Query:  VDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWI
        VDLLGRAGCLEEAK+LIEEMPMQPDA++WGSLLAACKVHRNIKLGEYVVEKLLEVD E SGPYVLLSNMYAERGDWGNVVRIRKLMR+RGVVK PGCSWI
Subjt:  VDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWI

Query:  EIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVPYVVSNEIDEEE
        EIQG+LNVFMVKDK+H +K+EIY LLRTLL+QM+R GYVPYV ++EIDEE+
Subjt:  EIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVPYVVSNEIDEEE

A0A6J1HNH1 pentatricopeptide repeat-containing protein At2g136001.7e-12785.66Show/hide
Query:  MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCM
        MYMKCGSVE+GC+VFE M++RDCVSWNAMIVGYAQNGFGN+ALG+FS+MLE GEKPDHVTMIGVL ACSHAGLLDEGRHYF+SM A+HGLV LKDHYTCM
Subjt:  MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCM

Query:  VDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWI
        VDLLGRAGCLEEAK++IEEMPMQPDA++WGSLLAACKVHRNIKLGEYVVEKLLEVD E SGPYVLLSNMYAERGDWGNV+RIRKLMR+RGVVK PGCSWI
Subjt:  VDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWI

Query:  EIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVPYVVSNEIDEEE
        EIQG+LNVFMVKDK+H +K+EIY LLRTLL+QM+R GYVPYV ++EIDEE+
Subjt:  EIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVPYVVSNEIDEEE

SwissProt top hitse value%identityAlignment
Q9LFL5 Pentatricopeptide repeat-containing protein At5g168605.5e-6744.94Show/hide
Query:  MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCM
        MY KCGS+ +   VF++M+ ++ V+W +++ GY  +G+G EALG+F +M  +G K D VT++ VL ACSH+G++D+G  YF  M    G+    +HY C+
Subjt:  MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCM

Query:  VDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWI
        VDLLGRAG L  A  LIEEMPM+P  V+W + L+ C++H  ++LGEY  EK+ E+ +   G Y LLSN+YA  G W +V RIR LMR +GV K PGCSW+
Subjt:  VDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWI

Query:  EIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVPYV--VSNEIDEEE----MKEHDNVLVL
        E       F V DK HP  KEIY +L   +++++ +GYVP      +++D+EE    + EH   L L
Subjt:  EIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVPYV--VSNEIDEEE----MKEHDNVLVL

Q9LW32 Pentatricopeptide repeat-containing protein At3g26782, mitochondrial4.6e-6645.45Show/hide
Query:  MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCM
        MY KCG VE   K F+ M  ++  SW AMI GY  +G   +AL +F  M++ G +P+++T + VL ACSHAGL  EG  +F +M  + G+    +HY CM
Subjt:  MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCM

Query:  VDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWI
        VDLLGRAG L++A DLI+ M M+PD++IW SLLAAC++H+N++L E  V +L E+D+   G Y+LLS++YA+ G W +V R+R +M+ RG+VK PG S +
Subjt:  VDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWI

Query:  EIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVPYV--VSNEIDEEE
        E+ G+++VF++ D++HP++++IY  L  L +++   GYV     V +++DEEE
Subjt:  EIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVPYV--VSNEIDEEE

Q9SI53 Pentatricopeptide repeat-containing protein At2g03880, mitochondrial1.2e-6946.09Show/hide
Query:  MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCM
        MY KCGS+E+  +VF  M +RD ++W+ MI G AQNG+  EAL +F +M   G KP+++T++GVL ACSHAGLL++G +YF+SM   +G+  +++HY CM
Subjt:  MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCM

Query:  VDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWI
        +DLLG+AG L++A  L+ EM  +PDAV W +LL AC+V RN+ L EY  +K++ +D E +G Y LLSN+YA    W +V  IR  MR RG+ K PGCSWI
Subjt:  VDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWI

Query:  EIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVPYV--VSNEIDEEEMKE
        E+  Q++ F++ D  HP+  E+   L  L+ ++  +GYVP    V  +++ E+M++
Subjt:  EIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVPYV--VSNEIDEEEMKE

Q9SIT7 Pentatricopeptide repeat-containing protein At2g136003.2e-9966.02Show/hide
Query:  MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCM
        MY+KCG VE G  VF  M++RDCVSWNAMI+G+AQNG+GNEAL +F +MLE GEKPDH+TMIGVL AC HAG ++EGRHYF SM+   G+  L+DHYTCM
Subjt:  MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCM

Query:  VDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWI
        VDLLGRAG LEEAK +IEEMPMQPD+VIWGSLLAACKVHRNI LG+YV EKLLEV+   SGPYVLLSNMYAE G W +V+ +RK MRK GV K PGCSWI
Subjt:  VDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWI

Query:  EIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVPYVVSNEIDEEEMKEHDNVL
        +IQG  +VFMVKDK HP+KK+I++LL  L+ +MR      +     +  EEM    N+L
Subjt:  EIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVPYVVSNEIDEEEMKEHDNVL

Q9SY02 Pentatricopeptide repeat-containing protein At4g027508.2e-7150.2Show/hide
Query:  MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCM
        MY KCGS+E    +F+ M  +D VSWN MI GY+++GFG  AL  F  M   G KPD  TM+ VL ACSH GL+D+GR YF +M+  +G++    HY CM
Subjt:  MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCM

Query:  VDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWI
        VDLLGRAG LE+A +L++ MP +PDA IWG+LL A +VH N +L E   +K+  ++ E SG YVLLSN+YA  G WG+V ++R  MR +GV K PG SWI
Subjt:  VDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWI

Query:  EIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYV--PYVVSNEIDEEE
        EIQ + + F V D+ HP+K EI+  L  L  +M++ GYV    VV ++++EEE
Subjt:  EIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYV--PYVVSNEIDEEE

Arabidopsis top hitse value%identityAlignment
AT2G03880.1 Pentatricopeptide repeat (PPR) superfamily protein8.4e-7146.09Show/hide
Query:  MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCM
        MY KCGS+E+  +VF  M +RD ++W+ MI G AQNG+  EAL +F +M   G KP+++T++GVL ACSHAGLL++G +YF+SM   +G+  +++HY CM
Subjt:  MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCM

Query:  VDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWI
        +DLLG+AG L++A  L+ EM  +PDAV W +LL AC+V RN+ L EY  +K++ +D E +G Y LLSN+YA    W +V  IR  MR RG+ K PGCSWI
Subjt:  VDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWI

Query:  EIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVPYV--VSNEIDEEEMKE
        E+  Q++ F++ D  HP+  E+   L  L+ ++  +GYVP    V  +++ E+M++
Subjt:  EIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVPYV--VSNEIDEEEMKE

AT2G13600.1 Pentatricopeptide repeat (PPR) superfamily protein2.3e-10066.02Show/hide
Query:  MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCM
        MY+KCG VE G  VF  M++RDCVSWNAMI+G+AQNG+GNEAL +F +MLE GEKPDH+TMIGVL AC HAG ++EGRHYF SM+   G+  L+DHYTCM
Subjt:  MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCM

Query:  VDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWI
        VDLLGRAG LEEAK +IEEMPMQPD+VIWGSLLAACKVHRNI LG+YV EKLLEV+   SGPYVLLSNMYAE G W +V+ +RK MRK GV K PGCSWI
Subjt:  VDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWI

Query:  EIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVPYVVSNEIDEEEMKEHDNVL
        +IQG  +VFMVKDK HP+KK+I++LL  L+ +MR      +     +  EEM    N+L
Subjt:  EIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVPYVVSNEIDEEEMKEHDNVL

AT3G26782.1 Tetratricopeptide repeat (TPR)-like superfamily protein3.3e-6745.45Show/hide
Query:  MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCM
        MY KCG VE   K F+ M  ++  SW AMI GY  +G   +AL +F  M++ G +P+++T + VL ACSHAGL  EG  +F +M  + G+    +HY CM
Subjt:  MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCM

Query:  VDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWI
        VDLLGRAG L++A DLI+ M M+PD++IW SLLAAC++H+N++L E  V +L E+D+   G Y+LLS++YA+ G W +V R+R +M+ RG+VK PG S +
Subjt:  VDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWI

Query:  EIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVPYV--VSNEIDEEE
        E+ G+++VF++ D++HP++++IY  L  L +++   GYV     V +++DEEE
Subjt:  EIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVPYV--VSNEIDEEE

AT4G02750.1 Tetratricopeptide repeat (TPR)-like superfamily protein5.8e-7250.2Show/hide
Query:  MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCM
        MY KCGS+E    +F+ M  +D VSWN MI GY+++GFG  AL  F  M   G KPD  TM+ VL ACSH GL+D+GR YF +M+  +G++    HY CM
Subjt:  MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCM

Query:  VDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWI
        VDLLGRAG LE+A +L++ MP +PDA IWG+LL A +VH N +L E   +K+  ++ E SG YVLLSN+YA  G WG+V ++R  MR +GV K PG SWI
Subjt:  VDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWI

Query:  EIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYV--PYVVSNEIDEEE
        EIQ + + F V D+ HP+K EI+  L  L  +M++ GYV    VV ++++EEE
Subjt:  EIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYV--PYVVSNEIDEEE

AT5G16860.1 Tetratricopeptide repeat (TPR)-like superfamily protein3.9e-6844.94Show/hide
Query:  MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCM
        MY KCGS+ +   VF++M+ ++ V+W +++ GY  +G+G EALG+F +M  +G K D VT++ VL ACSH+G++D+G  YF  M    G+    +HY C+
Subjt:  MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCM

Query:  VDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWI
        VDLLGRAG L  A  LIEEMPM+P  V+W + L+ C++H  ++LGEY  EK+ E+ +   G Y LLSN+YA  G W +V RIR LMR +GV K PGCSW+
Subjt:  VDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWI

Query:  EIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVPYV--VSNEIDEEE----MKEHDNVLVL
        E       F V DK HP  KEIY +L   +++++ +GYVP      +++D+EE    + EH   L L
Subjt:  EIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVPYV--VSNEIDEEE----MKEHDNVLVL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATATGAAATGTGGATCAGTTGAGAATGGTTGTAAGGTGTTTGAACATATGGTGCAAAGGGATTGTGTCTCATGGAATGCTATGATAGTTGGATATGCACAAAATGG
CTTTGGTAATGAGGCCCTTGGAGTTTTCAGTAAAATGTTAGAATTAGGAGAGAAACCAGATCATGTCACGATGATTGGTGTTCTTTGCGCTTGTAGTCATGCCGGGCTGC
TTGATGAAGGCCGCCATTACTTTCAATCCATGAGTGCACAACATGGCTTGGTGTCATTGAAAGATCATTATACATGTATGGTTGATTTACTAGGCCGAGCTGGCTGCCTT
GAAGAAGCAAAAGATCTAATAGAGGAAATGCCGATGCAGCCTGATGCTGTCATCTGGGGATCCTTGCTTGCCGCTTGTAAAGTCCATCGGAACATCAAATTGGGGGAATA
TGTAGTAGAGAAGCTTTTAGAGGTAGATGCTGAGACTTCTGGACCATATGTTCTTCTCTCGAATATGTATGCTGAACGTGGAGATTGGGGGAATGTTGTGAGAATAAGAA
AGCTGATGAGAAAGAGAGGAGTGGTTAAACATCCAGGTTGCAGTTGGATTGAAATTCAGGGTCAGTTGAATGTTTTTATGGTTAAGGATAAAAAGCATCCAAAGAAGAAA
GAAATCTACACGCTTTTGAGAACACTTCTAAAACAGATGAGACGAGTTGGATATGTCCCATATGTTGTCAGCAATGAAATTGATGAAGAAGAGATGAAAGAACATGACAA
TGTCCTCGTCTTACCAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTATATGAAATGTGGATCAGTTGAGAATGGTTGTAAGGTGTTTGAACATATGGTGCAAAGGGATTGTGTCTCATGGAATGCTATGATAGTTGGATATGCACAAAATGG
CTTTGGTAATGAGGCCCTTGGAGTTTTCAGTAAAATGTTAGAATTAGGAGAGAAACCAGATCATGTCACGATGATTGGTGTTCTTTGCGCTTGTAGTCATGCCGGGCTGC
TTGATGAAGGCCGCCATTACTTTCAATCCATGAGTGCACAACATGGCTTGGTGTCATTGAAAGATCATTATACATGTATGGTTGATTTACTAGGCCGAGCTGGCTGCCTT
GAAGAAGCAAAAGATCTAATAGAGGAAATGCCGATGCAGCCTGATGCTGTCATCTGGGGATCCTTGCTTGCCGCTTGTAAAGTCCATCGGAACATCAAATTGGGGGAATA
TGTAGTAGAGAAGCTTTTAGAGGTAGATGCTGAGACTTCTGGACCATATGTTCTTCTCTCGAATATGTATGCTGAACGTGGAGATTGGGGGAATGTTGTGAGAATAAGAA
AGCTGATGAGAAAGAGAGGAGTGGTTAAACATCCAGGTTGCAGTTGGATTGAAATTCAGGGTCAGTTGAATGTTTTTATGGTTAAGGATAAAAAGCATCCAAAGAAGAAA
GAAATCTACACGCTTTTGAGAACACTTCTAAAACAGATGAGACGAGTTGGATATGTCCCATATGTTGTCAGCAATGAAATTGATGAAGAAGAGATGAAAGAACATGACAA
TGTCCTCGTCTTACCAAATTGA
Protein sequenceShow/hide protein sequence
MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCMVDLLGRAGCL
EEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWIEIQGQLNVFMVKDKKHPKKK
EIYTLLRTLLKQMRRVGYVPYVVSNEIDEEEMKEHDNVLVLPN