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Moc09g10810 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g10810
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr9:9178409..9182388
RNA-Seq ExpressionMoc09g10810
SyntenyMoc09g10810
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFZ00546.1 hypothetical protein Acr_14g0001810 [Actinidia rufa]6.1e-0836.19Show/hide
Query:  VRIGLHSLRIEEYDPITNDERLKIHLDLLD------ELRETSHRCVVAQ---NNTSHNTTTPMFDHKHSRRVILCKVAQGTKDTVNGVLGPTWEGPYRIT
        V IG+ S R+  +D  TN+  L+++LDLL+      ELR+T+++C VA+       H +  P         ++L KV   TK+   G LGPTWEGPY++ 
Subjt:  VRIGLHSLRIEEYDPITNDERLKIHLDLLD------ELRETSHRCVVAQ---NNTSHNTTTPMFDHKHSRRVILCKVAQGTKDTVNGVLGPTWEGPYRIT

Query:  RLHDP
        ++  P
Subjt:  RLHDP

XP_022142669.1 uncharacterized protein LOC111012723 [Momordica charantia]8.2e-1345Show/hide
Query:  VRIGLHSLRIEEYDPITNDERLKIHLDLLDELRETSHRCVVAQNNTSH----NTTTPMFDHKHSRRVILCKVAQGTKDTVNGVLGPTWEGPYRITRLHDP
        V+I L SLRI EY+P TNDERL++HL+L++ELRE S + +  +   S     N     F+       +L +VAQ TK+T +GVLGP WEG Y++ R+  P
Subjt:  VRIGLHSLRIEEYDPITNDERLKIHLDLLDELRETSHRCVVAQNNTSH----NTTTPMFDHKHSRRVILCKVAQGTKDTVNGVLGPTWEGPYRITRLHDP

XP_022155342.1 uncharacterized protein LOC111022476 [Momordica charantia]2.1e-0836.46Show/hide
Query:  VRIGLHSLRIEEYDPITNDERLKIHLDLLDELRETSHRCVVAQNN---TSHNTTTPMFDHKHSRRVILCKVAQGTKDTVNGVLGPTWEGPYRITRL
        V IGL S  +E++ P+ N+E +K++L+LL+E RET+        N     +N+     D K    ++L K+   TKD+++   GPTWEGPY++T++
Subjt:  VRIGLHSLRIEEYDPITNDERLKIHLDLLDELRETSHRCVVAQNN---TSHNTTTPMFDHKHSRRVILCKVAQGTKDTVNGVLGPTWEGPYRITRL

XP_022158579.1 uncharacterized protein LOC111025033 [Momordica charantia]5.5e-0940.62Show/hide
Query:  VRIGLHSLRIEEYDPITNDERLKIHLDLLDELRETSHRCVVAQNN---TSHNTTTPMFDHKHSRRVILCKVAQGTKDTVNGVLGPTWEGPYRITRL
        V IGL S R+E++  + N+E +K++LDLL+E RET+        N     +N+     D K    ++L KV   TKD+ +G LGPTWEGPY+ T++
Subjt:  VRIGLHSLRIEEYDPITNDERLKIHLDLLDELRETSHRCVVAQNN---TSHNTTTPMFDHKHSRRVILCKVAQGTKDTVNGVLGPTWEGPYRITRL

XP_030925807.1 uncharacterized protein LOC115952727 [Quercus lobata]4.6e-0837.89Show/hide
Query:  RIGLHSLRIEEYDPITNDERLKIHLDLLDELRETSHRCVVAQNNTSHNTTTPMFDHKHSR--RVILCKVAQGTKDTVNGVLGPTWEGPYRITRLH
        ++GL S R+  +D   NDE + + LDL+DE+RET+ + +    +           H+  +   ++L +V   TKDT  G LGP+WEGPYRIT  H
Subjt:  RIGLHSLRIEEYDPITNDERLKIHLDLLDELRETSHRCVVAQNNTSHNTTTPMFDHKHSR--RVILCKVAQGTKDTVNGVLGPTWEGPYRITRLH

TrEMBL top hitse value%identityAlignment
A0A2N9EW93 Ribonuclease H7.0e-1038Show/hide
Query:  VRIGLHSLRIEEYDPITNDERLKIHLDLLDELRETSHRCVVAQNNTSHNTTTPMFDHKHSRR------VILCKVAQGTKDTVNGVLGPTWEGPYRITRLH
        V IGL + R   YD +TND++L+ +LDL+DE+R+ +     A+           +D +   R      ++L KV   TKD   G LGPTWEGPYR+ + H
Subjt:  VRIGLHSLRIEEYDPITNDERLKIHLDLLDELRETSHRCVVAQNNTSHNTTTPMFDHKHSRR------VILCKVAQGTKDTVNGVLGPTWEGPYRITRLH

A0A2N9F122 Integrase catalytic domain-containing protein5.9e-0936Show/hide
Query:  VRIGLHSLRIEEYDPITNDERLKIHLDLLDELRETSHRCVVAQNNTSHNTTTPMFDHKHSRR------VILCKVAQGTKDTVNGVLGPTWEGPYRITRLH
        V +GL + R   YD ++ND +L+ +LDL+DE+R+ +     A+           +D +   R      ++L KV   TKD   G LGPTWEGPYR+ + H
Subjt:  VRIGLHSLRIEEYDPITNDERLKIHLDLLDELRETSHRCVVAQNNTSHNTTTPMFDHKHSRR------VILCKVAQGTKDTVNGVLGPTWEGPYRITRLH

A0A2N9G648 Ribonuclease H2.7e-0937Show/hide
Query:  VRIGLHSLRIEEYDPITNDERLKIHLDLLDELRETSHRCVVAQNNTSHNTTTPMFDHKHSRR------VILCKVAQGTKDTVNGVLGPTWEGPYRITRLH
        V IGL + R   YD +TND++L+ +LD +DE+R+ +     A+           +D +   R      ++L KV   TKD   G LGPTWEGPYR+ + H
Subjt:  VRIGLHSLRIEEYDPITNDERLKIHLDLLDELRETSHRCVVAQNNTSHNTTTPMFDHKHSRR------VILCKVAQGTKDTVNGVLGPTWEGPYRITRLH

A0A6J1CM48 Ribonuclease H4.0e-1345Show/hide
Query:  VRIGLHSLRIEEYDPITNDERLKIHLDLLDELRETSHRCVVAQNNTSH----NTTTPMFDHKHSRRVILCKVAQGTKDTVNGVLGPTWEGPYRITRLHDP
        V+I L SLRI EY+P TNDERL++HL+L++ELRE S + +  +   S     N     F+       +L +VAQ TK+T +GVLGP WEG Y++ R+  P
Subjt:  VRIGLHSLRIEEYDPITNDERLKIHLDLLDELRETSHRCVVAQNNTSH----NTTTPMFDHKHSRRVILCKVAQGTKDTVNGVLGPTWEGPYRITRLHDP

A0A6J1DZU0 Ribonuclease H2.7e-0940.62Show/hide
Query:  VRIGLHSLRIEEYDPITNDERLKIHLDLLDELRETSHRCVVAQNN---TSHNTTTPMFDHKHSRRVILCKVAQGTKDTVNGVLGPTWEGPYRITRL
        V IGL S R+E++  + N+E +K++LDLL+E RET+        N     +N+     D K    ++L KV   TKD+ +G LGPTWEGPY+ T++
Subjt:  VRIGLHSLRIEEYDPITNDERLKIHLDLLDELRETSHRCVVAQNN---TSHNTTTPMFDHKHSRRVILCKVAQGTKDTVNGVLGPTWEGPYRITRL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAGACCACCAGCAAACAAACAGCCTAATCCACATGAGATCCGGACAATATTTAGCGGACCAACTGGAGAATAGTATAGTAGAAAGAGAAAAGCTCATGCCAGGCAA
GCACAGCTATATGGCTCTACACCCAGAATCGGCCTTGTCAAACCTCAAACCACCAAAACCAAGTGTTGATACAGAAAGGGCAGAAAAGCCCTCTGAAACCGTGATGCTCG
CCCCGCTCGGTCGAAATAAGGATATTCTACAAAGTAAGTTAAAGAATCCCAACAACGCACGAAGGGAGCTAGCGGAAGCAGTAGAGTCTATACCCCTACTTTCAGAAGAA
CGAAGAGTCAGGATTGGCCTTCATTCTTTAAGAATAGAGGAATATGATCCCATCACCAATGATGAAAGACTCAAAATTCATCTAGACCTTCTGGATGAACTTCGAGAGAC
CTCTCATCGATGTGTCGTTGCTCAAAACAACACATCTCACAATACTACGACGCCAATGTTTGACCACAAGCATTCCAGAAGGGTGATCTTGTGTAAAGTGGCACAAGGAA
CCAAAGACACTGTCAATGGAGTACTCGGCCCAACATGGGAAGGCCCATATCGCATCACTCGACTTCACGACCCGATACAAACTACTTGGAAAATCTCGAAGGAAAGCAGT
TGA
mRNA sequenceShow/hide mRNA sequence
ATGATAGACCACCAGCAAACAAACAGCCTAATCCACATGAGATCCGGACAATATTTAGCGGACCAACTGGAGAATAGTATAGTAGAAAGAGAAAAGCTCATGCCAGGCAA
GCACAGCTATATGGCTCTACACCCAGAATCGGCCTTGTCAAACCTCAAACCACCAAAACCAAGTGTTGATACAGAAAGGGCAGAAAAGCCCTCTGAAACCGTGATGCTCG
CCCCGCTCGGTCGAAATAAGGATATTCTACAAAGTAAGTTAAAGAATCCCAACAACGCACGAAGGGAGCTAGCGGAAGCAGTAGAGTCTATACCCCTACTTTCAGAAGAA
CGAAGAGTCAGGATTGGCCTTCATTCTTTAAGAATAGAGGAATATGATCCCATCACCAATGATGAAAGACTCAAAATTCATCTAGACCTTCTGGATGAACTTCGAGAGAC
CTCTCATCGATGTGTCGTTGCTCAAAACAACACATCTCACAATACTACGACGCCAATGTTTGACCACAAGCATTCCAGAAGGGTGATCTTGTGTAAAGTGGCACAAGGAA
CCAAAGACACTGTCAATGGAGTACTCGGCCCAACATGGGAAGGCCCATATCGCATCACTCGACTTCACGACCCGATACAAACTACTTGGAAAATCTCGAAGGAAAGCAGT
TGA
Protein sequenceShow/hide protein sequence
MIDHQQTNSLIHMRSGQYLADQLENSIVEREKLMPGKHSYMALHPESALSNLKPPKPSVDTERAEKPSETVMLAPLGRNKDILQSKLKNPNNARRELAEAVESIPLLSEE
RRVRIGLHSLRIEEYDPITNDERLKIHLDLLDELRETSHRCVVAQNNTSHNTTTPMFDHKHSRRVILCKVAQGTKDTVNGVLGPTWEGPYRITRLHDPIQTTWKISKESS