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Moc09g10840 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g10840
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationchr9:9202226..9203075
RNA-Seq ExpressionMoc09g10840
SyntenyMoc09g10840
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PIN12644.1 hypothetical protein CDL12_14745 [Handroanthus impetiginosus]1.1e-0531.88Show/hide
Query:  YIFYAKPKAAVIQLVQELYVNLDSQCSVYIMVIGKEVCWTAEAINEVVYTRSRTF------------LLVY---------------LKPEENVWHHLLKS
        Y F  KP AA+  +V+E Y N        + V G+ V +  +A +E  Y     F            L+V+               LKPE   W H + +
Subjt:  YIFYAKPKAAVIQLVQELYVNLDSQCSVYIMVIGKEVCWTAEAINEVVYTRSRTF------------LLVY---------------LKPEENVWHHLLKS

Query:  KMLPTTRDSSITKERVILMFFIMERLNIDVGRLIEKEI
        +M+P T  S IT +RV+LMF I+E + IDVG++I + I
Subjt:  KMLPTTRDSSITKERVILMFFIMERLNIDVGRLIEKEI

PON44141.1 hypothetical protein PanWU01x14_268850 [Parasponia andersonii]5.3e-0538.67Show/hide
Query:  WTAEAINEVVYTRSRTFLLVYLKPEENVWHHLLKSKMLPTTRDSSITKERVILMFFIMERLNIDVGRLIEKEIAA
        W        +Y RS       L P   VW+H LKS +LPTT    ++KERV+L++ ++   +I+VGR+I +EI A
Subjt:  WTAEAINEVVYTRSRTFLLVYLKPEENVWHHLLKSKMLPTTRDSSITKERVILMFFIMERLNIDVGRLIEKEIAA

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.4e-0528.19Show/hide
Query:  FYAKPKAAVIQLVQELYVNLDSQCSVYIMVIGKEVCWTAEAIN-------------EVVYTRSRTFLLVYLK-------------------------PEE
        F A P+  ++ LV+E Y NL       + V G +V W+ EAIN             E +   ++  L+  L+                         P  
Subjt:  FYAKPKAAVIQLVQELYVNLDSQCSVYIMVIGKEVCWTAEAIN-------------EVVYTRSRTFLLVYLK-------------------------PEE

Query:  NVWHHLLKSKMLPTTRDSSITKERVILMFFIMERLNIDVGRLIEKEIAA
         VW+H LKS++LPTT   +++K+R++L+  ++   +I+VGR+I  EI A
Subjt:  NVWHHLLKSKMLPTTRDSSITKERVILMFFIMERLNIDVGRLIEKEIAA

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]5.3e-0527.33Show/hide
Query:  IFYAKPKAAVIQLVQELYVNLDSQCSVYIMVIGKEVCWTAEAIN-------------EVVYTRSRTFLLVYLK-------------------------PE
        +F A P+  ++ LV+E Y N+ +     + + G +V  + EAIN             E V   ++  L++ L+                         P 
Subjt:  IFYAKPKAAVIQLVQELYVNLDSQCSVYIMVIGKEVCWTAEAIN-------------EVVYTRSRTFLLVYLK-------------------------PE

Query:  ENVWHHLLKSKMLPTTRDSSITKERVILMFFIMERLNIDVGRLIEKEIAA
          VW+H LKS++LPTT   +++KE V L++ ++   +I+VGR+I +EI A
Subjt:  ENVWHHLLKSKMLPTTRDSSITKERVILMFFIMERLNIDVGRLIEKEIAA

PON71279.1 hypothetical protein PanWU01x14_074190, partial [Parasponia andersonii]4.1e-0537.8Show/hide
Query:  IMVIGKEVCWTAEAINEVVYTRSRTFLLVYLKPEENVWHHLLKSKMLPTTRDSSITKERVILMFFIMERLNIDVGRLIEKEI
        I V G E  W   + +  +  RS       L P  NVW+H LKS++LPTT   +++KERV+L++ ++   +I+VG++I++EI
Subjt:  IMVIGKEVCWTAEAINEVVYTRSRTFLLVYLKPEENVWHHLLKSKMLPTTRDSSITKERVILMFFIMERLNIDVGRLIEKEI

TrEMBL top hitse value%identityAlignment
A0A2G9H553 Uncharacterized protein5.2e-0631.88Show/hide
Query:  YIFYAKPKAAVIQLVQELYVNLDSQCSVYIMVIGKEVCWTAEAINEVVYTRSRTF------------LLVY---------------LKPEENVWHHLLKS
        Y F  KP AA+  +V+E Y N        + V G+ V +  +A +E  Y     F            L+V+               LKPE   W H + +
Subjt:  YIFYAKPKAAVIQLVQELYVNLDSQCSVYIMVIGKEVCWTAEAINEVVYTRSRTF------------LLVY---------------LKPEENVWHHLLKS

Query:  KMLPTTRDSSITKERVILMFFIMERLNIDVGRLIEKEI
        +M+P T  S IT +RV+LMF I+E + IDVG++I + I
Subjt:  KMLPTTRDSSITKERVILMFFIMERLNIDVGRLIEKEI

A0A2P5AGA5 Uncharacterized protein (Fragment)2.6e-0528.19Show/hide
Query:  FYAKPKAAVIQLVQELYVNLDSQCSVYIMVIGKEVCWTAEAIN--------------------------------------EVVYTRSRTFLLVYLKPEE
        F A P+  ++ LV+E Y NL       + V G +V W+ EAIN                                       V    + T +   L P  
Subjt:  FYAKPKAAVIQLVQELYVNLDSQCSVYIMVIGKEVCWTAEAIN--------------------------------------EVVYTRSRTFLLVYLKPEE

Query:  NVWHHLLKSKMLPTTRDSSITKERVILMFFIMERLNIDVGRLIEKEIAA
         VW H LKS +LPTT   +++K+R++L+  ++   +I+VGR+I  EI A
Subjt:  NVWHHLLKSKMLPTTRDSSITKERVILMFFIMERLNIDVGRLIEKEIAA

A0A2P5B5S0 Uncharacterized protein2.6e-0538.67Show/hide
Query:  WTAEAINEVVYTRSRTFLLVYLKPEENVWHHLLKSKMLPTTRDSSITKERVILMFFIMERLNIDVGRLIEKEIAA
        W        +Y RS       L P   VW+H LKS +LPTT    ++KERV+L++ ++   +I+VGR+I +EI A
Subjt:  WTAEAINEVVYTRSRTFLLVYLKPEENVWHHLLKSKMLPTTRDSSITKERVILMFFIMERLNIDVGRLIEKEIAA

A0A2P5BCG4 Uncharacterized protein (Fragment)6.7e-0628.19Show/hide
Query:  FYAKPKAAVIQLVQELYVNLDSQCSVYIMVIGKEVCWTAEAIN-------------EVVYTRSRTFLLVYLK-------------------------PEE
        F A P+  ++ LV+E Y NL       + V G +V W+ EAIN             E +   ++  L+  L+                         P  
Subjt:  FYAKPKAAVIQLVQELYVNLDSQCSVYIMVIGKEVCWTAEAIN-------------EVVYTRSRTFLLVYLK-------------------------PEE

Query:  NVWHHLLKSKMLPTTRDSSITKERVILMFFIMERLNIDVGRLIEKEIAA
         VW+H LKS++LPTT   +++K+R++L+  ++   +I+VGR+I  EI A
Subjt:  NVWHHLLKSKMLPTTRDSSITKERVILMFFIMERLNIDVGRLIEKEIAA

A0A2P5DDA9 Uncharacterized protein (Fragment)2.0e-0537.8Show/hide
Query:  IMVIGKEVCWTAEAINEVVYTRSRTFLLVYLKPEENVWHHLLKSKMLPTTRDSSITKERVILMFFIMERLNIDVGRLIEKEI
        I V G E  W   + +  +  RS       L P  NVW+H LKS++LPTT   +++KERV+L++ ++   +I+VG++I++EI
Subjt:  IMVIGKEVCWTAEAINEVVYTRSRTFLLVYLKPEENVWHHLLKSKMLPTTRDSSITKERVILMFFIMERLNIDVGRLIEKEI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAAGGAAGCTGTGGGCAAGAAGCTTAAAGACAAAGAAAATGTTACTCCAGGGGCGTTGAGGTATGAAAGATTTGTTGATGCTGTAGCATCAGCCTACATATTCTA
TGCCAAGCCCAAGGCTGCGGTGATTCAGCTAGTGCAGGAGTTATATGTCAATTTAGACTCTCAATGCTCTGTGTACATCATGGTAATTGGAAAGGAGGTGTGCTGGACTG
CCGAGGCAATCAATGAGGTTGTCTACACGCGGAGCCGGACTTTTCTACTAGTATACTTGAAGCCCGAGGAAAATGTTTGGCATCACCTCCTGAAGAGTAAAATGCTACCA
ACAACCCGTGACTCCTCTATAACCAAGGAAAGGGTAATACTGATGTTTTTCATAATGGAGAGGCTTAACATCGATGTTGGGAGGCTGATAGAGAAGGAAATTGCAGCGTT
GGAGGATGTTAATCAAGTCCTAGCAGATAAGGGAATAATTGATGAAACGACAATTGAGCATTTGAAGGCAGTTGACCATACCAAGCGAGGAGGAAACATTGTTTTTGCCA
TAAGGAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAAAGGAAGCTGTGGGCAAGAAGCTTAAAGACAAAGAAAATGTTACTCCAGGGGCGTTGAGGTATGAAAGATTTGTTGATGCTGTAGCATCAGCCTACATATTCTA
TGCCAAGCCCAAGGCTGCGGTGATTCAGCTAGTGCAGGAGTTATATGTCAATTTAGACTCTCAATGCTCTGTGTACATCATGGTAATTGGAAAGGAGGTGTGCTGGACTG
CCGAGGCAATCAATGAGGTTGTCTACACGCGGAGCCGGACTTTTCTACTAGTATACTTGAAGCCCGAGGAAAATGTTTGGCATCACCTCCTGAAGAGTAAAATGCTACCA
ACAACCCGTGACTCCTCTATAACCAAGGAAAGGGTAATACTGATGTTTTTCATAATGGAGAGGCTTAACATCGATGTTGGGAGGCTGATAGAGAAGGAAATTGCAGCGTT
GGAGGATGTTAATCAAGTCCTAGCAGATAAGGGAATAATTGATGAAACGACAATTGAGCATTTGAAGGCAGTTGACCATACCAAGCGAGGAGGAAACATTGTTTTTGCCA
TAAGGAGGTGA
Protein sequenceShow/hide protein sequence
MKKEAVGKKLKDKENVTPGALRYERFVDAVASAYIFYAKPKAAVIQLVQELYVNLDSQCSVYIMVIGKEVCWTAEAINEVVYTRSRTFLLVYLKPEENVWHHLLKSKMLP
TTRDSSITKERVILMFFIMERLNIDVGRLIEKEIAALEDVNQVLADKGIIDETTIEHLKAVDHTKRGGNIVFAIRR