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Moc09g11190 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g11190
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Genome locationchr9:9516441..9517119
RNA-Seq ExpressionMoc09g11190
SyntenyMoc09g11190
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]2.7e-1847.47Show/hide
Query:  AIALENLVGKFEKLDSDEDGKCWGKTLRVRSQIDVSKSLRRGVMIKIGAMADERWIPITYEKLPDFCYGCGRLGHVIKDCE--TNDDEGDELQYGAWLR
        A  L N +G FE ++S+ +  CWG  LRVR + DV K L RG+ + +       WIPI YE+LPDF Y CGRL H++KDC     D     LQYG WLR
Subjt:  AIALENLVGKFEKLDSDEDGKCWGKTLRVRSQIDVSKSLRRGVMIKIGAMADERWIPITYEKLPDFCYGCGRLGHVIKDCE--TNDDEGDELQYGAWLR

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]3.5e-1840.13Show/hide
Query:  AIALENLVGKFEKLDSDEDGKCWGKTLRVRSQIDVSKSLRRGVMIKIGAMADERWIPITYEKLPDFCYGCGRLGHVIKDCE-----TNDDEGDELQYGAW
        AI L N +G F  +D +E G  WG +LR+R  ID++K LRRG+ I I       WIPI YE+LPDFCY CG +GH   DC+       DD     +YG W
Subjt:  AIALENLVGKFEKLDSDEDGKCWGKTLRVRSQIDVSKSLRRGVMIKIGAMADERWIPITYEKLPDFCYGCGRLGHVIKDCE-----TNDDEGDELQYGAW

Query:  LR-----SGPNQPRKGNRSEGRREAFRGRGRGGSRKYQWRFEEEELEEQTDQ
        LR     +G  + RKG      RE   G     S++      +++L EQT+Q
Subjt:  LR-----SGPNQPRKGNRSEGRREAFRGRGRGGSRKYQWRFEEEELEEQTDQ

XP_035547259.1 uncharacterized protein LOC118348856 [Juglans regia]1.0e-1740.52Show/hide
Query:  NLVGKFEKLDSDEDGKCWGKTLRVRSQIDVSKSLRRGVMIKIGAMADERWIPITYEKLPDFCYGCGRLGHVIKDCETNDDEG----DELQYGAWLRSGPN
        N +G  E++D ++    WG+ LR+R ++++S+ L RG+ +K+G      WI   YE+LP+FCY CG+LGH  KDCE N  +G    D+L +G WL  G  
Subjt:  NLVGKFEKLDSDEDGKCWGKTLRVRSQIDVSKSLRRGVMIKIGAMADERWIPITYEKLPDFCYGCGRLGHVIKDCETNDDEG----DELQYGAWLRSGPN

Query:  QPRKGNRSEGRREAFR
          R  + S  RR  FR
Subjt:  QPRKGNRSEGRREAFR

XP_038708494.1 uncharacterized protein LOC120003548 [Tripterygium wilfordii]1.0e-1740.91Show/hide
Query:  MPFQRAGIQTAIALENLVGKFEKLDSDEDGKCWGKTLRVRSQIDVSKSLRRGVMIKIGAMADERWIPITYEKLPDFCYGCGRLGHVIKDCETNDDEGDEL
        +PF+    +  + L   VG+ EK+D D +G  WGK LRVR +ID++K L+R VM+          + + YE+LP+FCY CGRLGHV +DCE  + E  E 
Subjt:  MPFQRAGIQTAIALENLVGKFEKLDSDEDGKCWGKTLRVRSQIDVSKSLRRGVMIKIGAMADERWIPITYEKLPDFCYGCGRLGHVIKDCETNDDEGDEL

Query:  Q-YGAWLRSGPNQPRKGNRSEGRREAFRGRGR
        + YG WLRS P + R+   S   +   R   R
Subjt:  Q-YGAWLRSGPNQPRKGNRSEGRREAFRGRGR

XP_038716189.1 uncharacterized protein At4g02000-like [Tripterygium wilfordii]1.3e-1742.24Show/hide
Query:  MPFQRAGIQTAIALENLVGKFEKLDSDEDGKCWGKTLRVRSQIDVSKSLRRGVMIKIGAMADERWIPITYEKLPDFCYGCGRLGHVIKDCETNDDEGDEL
        +PF+    +  + L   VG+ EK+D D +G  WGK LRVR  ID++K L+R VM+          + + YE+LP+FCY CG+LGHV  DCE  + +  E 
Subjt:  MPFQRAGIQTAIALENLVGKFEKLDSDEDGKCWGKTLRVRSQIDVSKSLRRGVMIKIGAMADERWIPITYEKLPDFCYGCGRLGHVIKDCETNDDEGDEL

Query:  Q-YGAWLRSGPNQPRK
        + YG WLRS P + R+
Subjt:  Q-YGAWLRSGPNQPRK

TrEMBL top hitse value%identityAlignment
A0A2N9E949 CCHC-type domain-containing protein8.5e-1837.7Show/hide
Query:  MPFQRAGIQTAIALENLVGKFEKLDSDEDGKCWGKTLRVRSQIDVSKSLRRGVMIKIGAMADERWIPITYEKLPDFCYGCGRLGHVIKDC-----ETNDD
        +PF+    +TA ++ N +G  E++D  EDG  WG+ +RV+ +IDVS  L R   +K+G   +  W+ + YEKLP FCY CG LGH  ++C          
Subjt:  MPFQRAGIQTAIALENLVGKFEKLDSDEDGKCWGKTLRVRSQIDVSKSLRRGVMIKIGAMADERWIPITYEKLPDFCYGCGRLGHVIKDC-----ETNDD

Query:  EGDELQYGAWLRSGPNQPRKGN
        +G+  +YG+WLR+ P + + G+
Subjt:  EGDELQYGAWLRSGPNQPRKGN

A0A2N9G3M9 CCHC-type domain-containing protein8.5e-1837.7Show/hide
Query:  MPFQRAGIQTAIALENLVGKFEKLDSDEDGKCWGKTLRVRSQIDVSKSLRRGVMIKIGAMADERWIPITYEKLPDFCYGCGRLGHVIKDC-----ETNDD
        +PF+    +TA ++ N +G  E++D  EDG  WG+ +RV+ +IDVS  L R   +K+G   +  W+ + YEKLP FCY CG LGH  ++C          
Subjt:  MPFQRAGIQTAIALENLVGKFEKLDSDEDGKCWGKTLRVRSQIDVSKSLRRGVMIKIGAMADERWIPITYEKLPDFCYGCGRLGHVIKDC-----ETNDD

Query:  EGDELQYGAWLRSGPNQPRKGN
        +G+  +YG+WLR+ P + + G+
Subjt:  EGDELQYGAWLRSGPNQPRKGN

A0A6J1BSZ1 uncharacterized protein LOC1110054811.3e-1847.47Show/hide
Query:  AIALENLVGKFEKLDSDEDGKCWGKTLRVRSQIDVSKSLRRGVMIKIGAMADERWIPITYEKLPDFCYGCGRLGHVIKDCE--TNDDEGDELQYGAWLR
        A  L N +G FE ++S+ +  CWG  LRVR + DV K L RG+ + +       WIPI YE+LPDF Y CGRL H++KDC     D     LQYG WLR
Subjt:  AIALENLVGKFEKLDSDEDGKCWGKTLRVRSQIDVSKSLRRGVMIKIGAMADERWIPITYEKLPDFCYGCGRLGHVIKDCE--TNDDEGDELQYGAWLR

A0A6J1DU55 uncharacterized protein LOC1110231351.7e-1840.13Show/hide
Query:  AIALENLVGKFEKLDSDEDGKCWGKTLRVRSQIDVSKSLRRGVMIKIGAMADERWIPITYEKLPDFCYGCGRLGHVIKDCE-----TNDDEGDELQYGAW
        AI L N +G F  +D +E G  WG +LR+R  ID++K LRRG+ I I       WIPI YE+LPDFCY CG +GH   DC+       DD     +YG W
Subjt:  AIALENLVGKFEKLDSDEDGKCWGKTLRVRSQIDVSKSLRRGVMIKIGAMADERWIPITYEKLPDFCYGCGRLGHVIKDCE-----TNDDEGDELQYGAW

Query:  LR-----SGPNQPRKGNRSEGRREAFRGRGRGGSRKYQWRFEEEELEEQTDQ
        LR     +G  + RKG      RE   G     S++      +++L EQT+Q
Subjt:  LR-----SGPNQPRKGNRSEGRREAFRGRGRGGSRKYQWRFEEEELEEQTDQ

A0A6P9EID8 uncharacterized protein LOC1183488565.0e-1840.52Show/hide
Query:  NLVGKFEKLDSDEDGKCWGKTLRVRSQIDVSKSLRRGVMIKIGAMADERWIPITYEKLPDFCYGCGRLGHVIKDCETNDDEG----DELQYGAWLRSGPN
        N +G  E++D ++    WG+ LR+R ++++S+ L RG+ +K+G      WI   YE+LP+FCY CG+LGH  KDCE N  +G    D+L +G WL  G  
Subjt:  NLVGKFEKLDSDEDGKCWGKTLRVRSQIDVSKSLRRGVMIKIGAMADERWIPITYEKLPDFCYGCGRLGHVIKDCETNDDEG----DELQYGAWLRSGPN

Query:  QPRKGNRSEGRREAFR
          R  + S  RR  FR
Subjt:  QPRKGNRSEGRREAFR

SwissProt top hitse value%identityAlignment
P53996 Cellular nucleic acid-binding protein5.2e-0441.03Show/hide
Query:  GAMADERWIPITYEKLPDFCYGCGRLGHVIKDCETNDDE
        G    +R        LPD CY CG  GH+ KDC+  +DE
Subjt:  GAMADERWIPITYEKLPDFCYGCGRLGHVIKDCETNDDE

Arabidopsis top hitse value%identityAlignment
AT3G42140.1 zinc ion binding;nucleic acid binding4.1e-0430.34Show/hide
Query:  LVGKFEKLDSDEDGK---CW----GKTLR-VRSQIDVSKSLRRGVMIKIGAMADERWIPITYEKLPDFCYGCGRLGHVIKDCETNDDEG
        ++ ++ KL SD + K    W    G  LR + ++I  S   R G+ ++     D   +   YEKL +FC  CG L H   +C T+ ++G
Subjt:  LVGKFEKLDSDEDGK---CW----GKTLR-VRSQIDVSKSLRRGVMIKIGAMADERWIPITYEKLPDFCYGCGRLGHVIKDCETNDDEG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCATTTCAACGAGCTGGAATTCAGACAGCTATAGCTTTAGAAAATCTGGTAGGGAAATTTGAAAAGCTAGATTCCGATGAGGACGGGAAATGCTGGGGAAAAACTCT
TCGAGTTAGATCTCAAATTGATGTTAGCAAATCCTTACGTAGAGGAGTAATGATAAAGATCGGTGCGATGGCGGATGAAAGATGGATACCCATAACATACGAAAAGCTCC
CAGATTTTTGTTATGGTTGTGGTAGACTTGGCCATGTGATAAAGGACTGTGAGACCAATGATGATGAAGGTGATGAACTACAATATGGTGCCTGGTTAAGATCGGGACCA
AATCAGCCACGAAAAGGCAATAGATCAGAAGGACGTAGAGAAGCTTTTCGAGGCAGAGGCCGTGGAGGTAGTAGGAAATACCAGTGGAGATTTGAGGAGGAAGAGCTGGA
AGAACAAACAGATCAGGTGACGGAAAATCCAACAGTCGGAGAGGCTGAAGGTCTGGCGGCGAAGATCCCTATCGGTGAGGATGCAACGACCGAAAATGGAATAAATGGCA
AAACGGAAAGAGAGGAAAATGCGGAATCATATATTATCAACGTTGAAAATGGGGGACAAATTCCTCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCATTTCAACGAGCTGGAATTCAGACAGCTATAGCTTTAGAAAATCTGGTAGGGAAATTTGAAAAGCTAGATTCCGATGAGGACGGGAAATGCTGGGGAAAAACTCT
TCGAGTTAGATCTCAAATTGATGTTAGCAAATCCTTACGTAGAGGAGTAATGATAAAGATCGGTGCGATGGCGGATGAAAGATGGATACCCATAACATACGAAAAGCTCC
CAGATTTTTGTTATGGTTGTGGTAGACTTGGCCATGTGATAAAGGACTGTGAGACCAATGATGATGAAGGTGATGAACTACAATATGGTGCCTGGTTAAGATCGGGACCA
AATCAGCCACGAAAAGGCAATAGATCAGAAGGACGTAGAGAAGCTTTTCGAGGCAGAGGCCGTGGAGGTAGTAGGAAATACCAGTGGAGATTTGAGGAGGAAGAGCTGGA
AGAACAAACAGATCAGGTGACGGAAAATCCAACAGTCGGAGAGGCTGAAGGTCTGGCGGCGAAGATCCCTATCGGTGAGGATGCAACGACCGAAAATGGAATAAATGGCA
AAACGGAAAGAGAGGAAAATGCGGAATCATATATTATCAACGTTGAAAATGGGGGACAAATTCCTCATTAA
Protein sequenceShow/hide protein sequence
MPFQRAGIQTAIALENLVGKFEKLDSDEDGKCWGKTLRVRSQIDVSKSLRRGVMIKIGAMADERWIPITYEKLPDFCYGCGRLGHVIKDCETNDDEGDELQYGAWLRSGP
NQPRKGNRSEGRREAFRGRGRGGSRKYQWRFEEEELEEQTDQVTENPTVGEAEGLAAKIPIGEDATTENGINGKTEREENAESYIINVENGGQIPH