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Moc09g11610 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g11610
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr9:9845946..9850898
RNA-Seq ExpressionMoc09g11610
SyntenyMoc09g11610
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7113203.1 hypothetical protein RHSIM_RhsimUnG0150200 [Rhododendron simsii]2.7e-0733.33Show/hide
Query:  WVIDTTVLANVASDRRWFSSLTAGDYGSVRMRNESISK-----------------------------------GKLDDDGYSSEFSGGCWKLKRESRVVV
        WVID+    +V S R +F+S T GD+G VRM NE +SK                                   GKLDD+GY ++F  G WKL + S VV 
Subjt:  WVIDTTVLANVASDRRWFSSLTAGDYGSVRMRNESISK-----------------------------------GKLDDDGYSSEFSGGCWKLKRESRVVV

Query:  ICHKRSSVYVSEFGVAKGSL
           K S++Y+ +  ++KG +
Subjt:  ICHKRSSVYVSEFGVAKGSL

KAF7127171.1 hypothetical protein RHSIM_Rhsim11G0049900 [Rhododendron simsii]2.7e-0740.43Show/hide
Query:  WVIDTTVLANVASDRRWFSSLTAGDYGSVRMRNES-----------ISKGKLDDDGYSSEFSGGCWKLKRESRVVVICHKRSSVYVSEFGVAKG
        WVID+ V  +V S   +F+S   GD+G VRMRN+            IS  KLDD+GY++ F  G WKL + S VV   +K  S+Y  +  ++KG
Subjt:  WVIDTTVLANVASDRRWFSSLTAGDYGSVRMRNES-----------ISKGKLDDDGYSSEFSGGCWKLKRESRVVVICHKRSSVYVSEFGVAKG

KAF7129546.1 hypothetical protein RHSIM_Rhsim10G0154200 [Rhododendron simsii]4.5e-0732.5Show/hide
Query:  WVIDTTVLANVASDRRWFSSLTAGDYGSVRMRNESISK-----------------------------------GKLDDDGYSSEFSGGCWKLKRESRVVV
        WVID+    +V S R +F+S T GD+G VRM NE +SK                                   GKLDD+GY ++F  G WKL + S +V 
Subjt:  WVIDTTVLANVASDRRWFSSLTAGDYGSVRMRNESISK-----------------------------------GKLDDDGYSSEFSGGCWKLKRESRVVV

Query:  ICHKRSSVYVSEFGVAKGSL
           K S++Y+ +  ++KG +
Subjt:  ICHKRSSVYVSEFGVAKGSL

XP_022152155.1 cinnamoyl-CoA reductase-like SNL6 [Momordica charantia]3.1e-1676.47Show/hide
Query:  VVVICHKRSSVYVSEFGVAKGSLRQTMHRVVANGLGRDLRGPAALMARTDQKNLPSAQVEQLRSIAKG
        VV   HKRS VYVSEF VAKGSLRQTMH+VVA G  R LR PAALMA+TDQKNLPS QV+QLRS  KG
Subjt:  VVVICHKRSSVYVSEFGVAKGSLRQTMHRVVANGLGRDLRGPAALMARTDQKNLPSAQVEQLRSIAKG

XP_022157059.1 uncharacterized protein LOC111023870 [Momordica charantia]5.7e-1056.34Show/hide
Query:  GSLRQTMHRVVANGLGRDLRGPAALMARTDQKNLPSAQVEQLRSIAKGKWEFDRPSSSYLSCQTFRRAGEV
        GSLRQTMHRV  +  GRDL+GP  LMARTDQKNLPSA V+QLRS  KG    +      +     RR+GE+
Subjt:  GSLRQTMHRVVANGLGRDLRGPAALMARTDQKNLPSAQVEQLRSIAKGKWEFDRPSSSYLSCQTFRRAGEV

TrEMBL top hitse value%identityAlignment
A0A438BLS4 Retrovirus-related Pol polyprotein from transposon TNT 1-941.4e-0639.08Show/hide
Query:  WVIDTTVLANVASDRRWFSSLTAGDYGSVRMRNESISKG--KLDDDGYSSEFSGGCWKLKRESRVVVICHKRSSVYVSEFGVAKGSL
        WVID+ V  +    + +F+S T+GD+GSVRM N   +K   KLDD+G+ + F    WKL R S V+   +K  S+Y+ +  V   S+
Subjt:  WVIDTTVLANVASDRRWFSSLTAGDYGSVRMRNESISKG--KLDDDGYSSEFSGGCWKLKRESRVVVICHKRSSVYVSEFGVAKGSL

A0A484KC40 Uncharacterized protein1.4e-0630.83Show/hide
Query:  ISTRSLSNISIEQ--WVIDTTVLANVASDRRWFSSLTAGDYGSVRMRNES-----------------------------------ISKGKLDDDGYSSEF
        I    L N++ +   WVID+    ++ S R +FSS T+GD+G VRM N+                                    IS G LDD+GY+++F
Subjt:  ISTRSLSNISIEQ--WVIDTTVLANVASDRRWFSSLTAGDYGSVRMRNES-----------------------------------ISKGKLDDDGYSSEF

Query:  SGGCWKLKRESRVVVICHKRSSVYVSEFGVAKG
          G WKL R S ++    K++S+YV +  V  G
Subjt:  SGGCWKLKRESRVVVICHKRSSVYVSEFGVAKG

A0A484NPQ3 Uncharacterized protein1.1e-0630.83Show/hide
Query:  ISTRSLSNISIEQ--WVIDTTVLANVASDRRWFSSLTAGDYGSVRMRNES-----------------------------------ISKGKLDDDGYSSEF
        I    L N++ +   WVID+    ++ S R +FSS T+GD+G VRM N+                                    IS G LDD+GY+++F
Subjt:  ISTRSLSNISIEQ--WVIDTTVLANVASDRRWFSSLTAGDYGSVRMRNES-----------------------------------ISKGKLDDDGYSSEF

Query:  SGGCWKLKRESRVVVICHKRSSVYVSEFGVAKG
          G WKL R S ++    K++S+YV +  V  G
Subjt:  SGGCWKLKRESRVVVICHKRSSVYVSEFGVAKG

A0A6J1DD48 cinnamoyl-CoA reductase-like SNL61.5e-1676.47Show/hide
Query:  VVVICHKRSSVYVSEFGVAKGSLRQTMHRVVANGLGRDLRGPAALMARTDQKNLPSAQVEQLRSIAKG
        VV   HKRS VYVSEF VAKGSLRQTMH+VVA G  R LR PAALMA+TDQKNLPS QV+QLRS  KG
Subjt:  VVVICHKRSSVYVSEFGVAKGSLRQTMHRVVANGLGRDLRGPAALMARTDQKNLPSAQVEQLRSIAKG

A0A6J1DVE9 uncharacterized protein LOC1110238702.8e-1056.34Show/hide
Query:  GSLRQTMHRVVANGLGRDLRGPAALMARTDQKNLPSAQVEQLRSIAKGKWEFDRPSSSYLSCQTFRRAGEV
        GSLRQTMHRV  +  GRDL+GP  LMARTDQKNLPSA V+QLRS  KG    +      +     RR+GE+
Subjt:  GSLRQTMHRVVANGLGRDLRGPAALMARTDQKNLPSAQVEQLRSIAKGKWEFDRPSSSYLSCQTFRRAGEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCCTCATATAGAATGCCTTCCGAGATTAGGGTTTAATATGTTTGGAAATGTGGATAATTCTGGTGATCTTGATGCTGACATCTCGACAAGGTCTCTCAGC
AACATATCTATAGAACAGTGGGTAATAGACACTACAGTATTAGCGAACGTTGCTTCAGACAGACGTTGGTTCTCATCTCTTACTGCAGGTGATTATGGCTCAGTG
AGGATGAGGAATGAGAGTATCTCTAAGGGAAAGCTAGATGACGATGGCTATAGCAGTGAGTTCAGTGGGGGTTGTTGGAAGCTCAAAAGGGAATCCAGGGTGGTG
GTAATATGCCATAAGAGATCTTCTGTTTATGTGTCAGAGTTTGGGGTTGCCAAGGGTTCACTGAGACAAACAATGCACAGAGTAGTTGCGAATGGTTTAGGGCGA
GACCTTAGAGGACCAGCAGCATTGATGGCCAGAACAGATCAAAAGAATCTGCCATCAGCTCAAGTTGAACAATTGAGAAGTATTGCAAAAGGGAAATGGGAATTT
GATAGGCCATCGAGTTCATACCTCAGCTGTCAGACGTTCAGGCGAGCTGGAGAAGTCACATAG
mRNA sequenceShow/hide mRNA sequence
ATGAACCCTCATATAGAATGCCTTCCGAGATTAGGGTTTAATATGTTTGGAAATGTGGATAATTCTGGTGATCTTGATGCTGACATCTCGACAAGGTCTCTCAGC
AACATATCTATAGAACAGTGGGTAATAGACACTACAGTATTAGCGAACGTTGCTTCAGACAGACGTTGGTTCTCATCTCTTACTGCAGGTGATTATGGCTCAGTG
AGGATGAGGAATGAGAGTATCTCTAAGGGAAAGCTAGATGACGATGGCTATAGCAGTGAGTTCAGTGGGGGTTGTTGGAAGCTCAAAAGGGAATCCAGGGTGGTG
GTAATATGCCATAAGAGATCTTCTGTTTATGTGTCAGAGTTTGGGGTTGCCAAGGGTTCACTGAGACAAACAATGCACAGAGTAGTTGCGAATGGTTTAGGGCGA
GACCTTAGAGGACCAGCAGCATTGATGGCCAGAACAGATCAAAAGAATCTGCCATCAGCTCAAGTTGAACAATTGAGAAGTATTGCAAAAGGGAAATGGGAATTT
GATAGGCCATCGAGTTCATACCTCAGCTGTCAGACGTTCAGGCGAGCTGGAGAAGTCACATAG
Protein sequenceShow/hide protein sequence
MNPHIECLPRLGFNMFGNVDNSGDLDADISTRSLSNISIEQWVIDTTVLANVASDRRWFSSLTAGDYGSVRMRNESISKGKLDDDGYSSEFSGGCWKLKRESRVV
VICHKRSSVYVSEFGVAKGSLRQTMHRVVANGLGRDLRGPAALMARTDQKNLPSAQVEQLRSIAKGKWEFDRPSSSYLSCQTFRRAGEVT