; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc09g11730 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g11730
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionDUF4219 domain-containing protein
Genome locationchr9:9982819..9983331
RNA-Seq ExpressionMoc09g11730
SyntenyMoc09g11730
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR025314 - Domain of unknown function DUF4219


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151329.1 uncharacterized protein LOC111019291 [Momordica charantia]3.9e-6388.49Show/hide
Query:  MELGSNNLSSLASPVFDGENYQAWAIRIQAYMAGCDYWEAIEQDYEIAPLFENPTMYQIKTHEERVTRKVKARACLYAAVSPTIFNRIIVLKSTKEIWEF
        ME GSNNLSSLA PVFDGENYQAW IRIQAYM GCDYWEAIEQDYEIAPL +NPTM+QIKTH+ RVTRK KARACLYAAVSPTIFNRI+ LKS KEIWEF
Subjt:  MELGSNNLSSLASPVFDGENYQAWAIRIQAYMAGCDYWEAIEQDYEIAPLFENPTMYQIKTHEERVTRKVKARACLYAAVSPTIFNRIIVLKSTKEIWEF

Query:  LKSEYEGDERIKGMKVLNLVREFERMQMKDSESIKQYSD
        LKSEYEGDER KGM VLNLVREFERMQMKDSESIK+YSD
Subjt:  LKSEYEGDERIKGMKVLNLVREFERMQMKDSESIKQYSD

XP_022152365.1 uncharacterized protein LOC111020109 [Momordica charantia]1.2e-6489.93Show/hide
Query:  MELGSNNLSSLASPVFDGENYQAWAIRIQAYMAGCDYWEAIEQDYEIAPLFENPTMYQIKTHEERVTRKVKARACLYAAVSPTIFNRIIVLKSTKEIWEF
        MELGSNNLSSLA PVFDGENYQAWAIRIQAYM GC+YWEAIEQDYEIAPL +NPTM+QIKTH+ERVTRK KARACLYAAVSP IFNRI+ LKS KEIWEF
Subjt:  MELGSNNLSSLASPVFDGENYQAWAIRIQAYMAGCDYWEAIEQDYEIAPLFENPTMYQIKTHEERVTRKVKARACLYAAVSPTIFNRIIVLKSTKEIWEF

Query:  LKSEYEGDERIKGMKVLNLVREFERMQMKDSESIKQYSD
        LKSEYEGDERIKGMKVLNLVREFERMQMKDS+SIK+YSD
Subjt:  LKSEYEGDERIKGMKVLNLVREFERMQMKDSESIKQYSD

XP_022157914.1 uncharacterized protein LOC111024525 [Momordica charantia]7.3e-6287.05Show/hide
Query:  MELGSNNLSSLASPVFDGENYQAWAIRIQAYMAGCDYWEAIEQDYEIAPLFENPTMYQIKTHEERVTRKVKARACLYAAVSPTIFNRIIVLKSTKEIWEF
        MELGSNNLS LA PVFDGE YQ WAIRIQAYM GCDYWEAIEQDYEI+PL +NPTM+QIKTH+ERVTRK KAR CLYAAVSPTIFNRI+ LKS KEIWEF
Subjt:  MELGSNNLSSLASPVFDGENYQAWAIRIQAYMAGCDYWEAIEQDYEIAPLFENPTMYQIKTHEERVTRKVKARACLYAAVSPTIFNRIIVLKSTKEIWEF

Query:  LKSEYEGDERIKGMKVLNLVREFERMQMKDSESIKQYSD
        LKSEYEGDERIKGMKVLNLVREFERMQM D ESIK+YSD
Subjt:  LKSEYEGDERIKGMKVLNLVREFERMQMKDSESIKQYSD

XP_022158688.1 uncharacterized protein LOC111025149 [Momordica charantia]7.6e-6759.06Show/hide
Query:  MELGSNNLSSLASPVFDGENYQAWAIRIQAYMAGCDYWEAIEQDYEIAPLFENPTMYQIKTHEERVTRKVKARACLYAAVSPTIFNRIIVLKSTKEIWEF
        MELGSNNLSSLA PVFDGENYQ WAIRIQAYM GCDYWEAIEQDYEIAPL +NPTM+QIKTH+ERVTRK KARACLYAAVSP IFNRI+ LKS KEIWEF
Subjt:  MELGSNNLSSLASPVFDGENYQAWAIRIQAYMAGCDYWEAIEQDYEIAPLFENPTMYQIKTHEERVTRKVKARACLYAAVSPTIFNRIIVLKSTKEIWEF

Query:  LKSEYEGDERIKGMKVLNLVREFERMQMKDSESIKQYSD-------------------------------------------------------------
        LKSEYEGDERIKGMKVLNLVREFER+QMKDSESIK+YSD                                                             
Subjt:  LKSEYEGDERIKGMKVLNLVREFERMQMKDSESIKQYSD-------------------------------------------------------------

Query:  ---------------------IEWFCKDVETQQ--GAHIAVQQEEDQLFVATYF
                             IE FCK+ +TQQ  GAH AVQQEEDQLFVAT F
Subjt:  ---------------------IEWFCKDVETQQ--GAHIAVQQEEDQLFVATYF

XP_038889190.1 uncharacterized protein LOC120079069 [Benincasa hispida]9.9e-5983.45Show/hide
Query:  MELGSNNLSSLASPVFDGENYQAWAIRIQAYMAGCDYWEAIEQDYEIAPLFENPTMYQIKTHEERVTRKVKARACLYAAVSPTIFNRIIVLKSTKEIWEF
        ME GSN+LSSL   VFDGENYQAWAIR+QAYM  CDYWE IEQDYEIAPL +NPT+YQIKTH+ERVTRK KAR CLY AVSP IFNRI+ LKS KEIWEF
Subjt:  MELGSNNLSSLASPVFDGENYQAWAIRIQAYMAGCDYWEAIEQDYEIAPLFENPTMYQIKTHEERVTRKVKARACLYAAVSPTIFNRIIVLKSTKEIWEF

Query:  LKSEYEGDERIKGMKVLNLVREFERMQMKDSESIKQYSD
        LKSEYEGDERIKGMKVLNLVREFERMQMKD +SIK+YSD
Subjt:  LKSEYEGDERIKGMKVLNLVREFERMQMKDSESIKQYSD

TrEMBL top hitse value%identityAlignment
A0A1U8PA84 uncharacterized protein LOC1079558823.6e-5473.38Show/hide
Query:  MELGSNNLSSLASPVFDGENYQAWAIRIQAYMAGCDYWEAIEQDYEIAPLFENPTMYQIKTHEERVTRKVKARACLYAAVSPTIFNRIIVLKSTKEIWEF
        ME GS+NLS LA PVFDGENYQAWA+R+QAYM GCDYWE IE+DYE+ PL +NPTM QIK H ER TRK KAR+CLYA+VSP IFNRI+   STKEIW++
Subjt:  MELGSNNLSSLASPVFDGENYQAWAIRIQAYMAGCDYWEAIEQDYEIAPLFENPTMYQIKTHEERVTRKVKARACLYAAVSPTIFNRIIVLKSTKEIWEF

Query:  LKSEYEGDERIKGMKVLNLVREFERMQMKDSESIKQYSD
        LK +Y+GDERIK MKVLNL+REFER+Q+K+S+SIK+YSD
Subjt:  LKSEYEGDERIKGMKVLNLVREFERMQMKDSESIKQYSD

A0A6J1DCR7 uncharacterized protein LOC1110192911.9e-6388.49Show/hide
Query:  MELGSNNLSSLASPVFDGENYQAWAIRIQAYMAGCDYWEAIEQDYEIAPLFENPTMYQIKTHEERVTRKVKARACLYAAVSPTIFNRIIVLKSTKEIWEF
        ME GSNNLSSLA PVFDGENYQAW IRIQAYM GCDYWEAIEQDYEIAPL +NPTM+QIKTH+ RVTRK KARACLYAAVSPTIFNRI+ LKS KEIWEF
Subjt:  MELGSNNLSSLASPVFDGENYQAWAIRIQAYMAGCDYWEAIEQDYEIAPLFENPTMYQIKTHEERVTRKVKARACLYAAVSPTIFNRIIVLKSTKEIWEF

Query:  LKSEYEGDERIKGMKVLNLVREFERMQMKDSESIKQYSD
        LKSEYEGDER KGM VLNLVREFERMQMKDSESIK+YSD
Subjt:  LKSEYEGDERIKGMKVLNLVREFERMQMKDSESIKQYSD

A0A6J1DDR0 uncharacterized protein LOC1110201095.9e-6589.93Show/hide
Query:  MELGSNNLSSLASPVFDGENYQAWAIRIQAYMAGCDYWEAIEQDYEIAPLFENPTMYQIKTHEERVTRKVKARACLYAAVSPTIFNRIIVLKSTKEIWEF
        MELGSNNLSSLA PVFDGENYQAWAIRIQAYM GC+YWEAIEQDYEIAPL +NPTM+QIKTH+ERVTRK KARACLYAAVSP IFNRI+ LKS KEIWEF
Subjt:  MELGSNNLSSLASPVFDGENYQAWAIRIQAYMAGCDYWEAIEQDYEIAPLFENPTMYQIKTHEERVTRKVKARACLYAAVSPTIFNRIIVLKSTKEIWEF

Query:  LKSEYEGDERIKGMKVLNLVREFERMQMKDSESIKQYSD
        LKSEYEGDERIKGMKVLNLVREFERMQMKDS+SIK+YSD
Subjt:  LKSEYEGDERIKGMKVLNLVREFERMQMKDSESIKQYSD

A0A6J1DWT9 uncharacterized protein LOC1110251493.7e-6759.06Show/hide
Query:  MELGSNNLSSLASPVFDGENYQAWAIRIQAYMAGCDYWEAIEQDYEIAPLFENPTMYQIKTHEERVTRKVKARACLYAAVSPTIFNRIIVLKSTKEIWEF
        MELGSNNLSSLA PVFDGENYQ WAIRIQAYM GCDYWEAIEQDYEIAPL +NPTM+QIKTH+ERVTRK KARACLYAAVSP IFNRI+ LKS KEIWEF
Subjt:  MELGSNNLSSLASPVFDGENYQAWAIRIQAYMAGCDYWEAIEQDYEIAPLFENPTMYQIKTHEERVTRKVKARACLYAAVSPTIFNRIIVLKSTKEIWEF

Query:  LKSEYEGDERIKGMKVLNLVREFERMQMKDSESIKQYSD-------------------------------------------------------------
        LKSEYEGDERIKGMKVLNLVREFER+QMKDSESIK+YSD                                                             
Subjt:  LKSEYEGDERIKGMKVLNLVREFERMQMKDSESIKQYSD-------------------------------------------------------------

Query:  ---------------------IEWFCKDVETQQ--GAHIAVQQEEDQLFVATYF
                             IE FCK+ +TQQ  GAH AVQQEEDQLFVAT F
Subjt:  ---------------------IEWFCKDVETQQ--GAHIAVQQEEDQLFVATYF

A0A6J1DXX3 uncharacterized protein LOC1110245253.6e-6287.05Show/hide
Query:  MELGSNNLSSLASPVFDGENYQAWAIRIQAYMAGCDYWEAIEQDYEIAPLFENPTMYQIKTHEERVTRKVKARACLYAAVSPTIFNRIIVLKSTKEIWEF
        MELGSNNLS LA PVFDGE YQ WAIRIQAYM GCDYWEAIEQDYEI+PL +NPTM+QIKTH+ERVTRK KAR CLYAAVSPTIFNRI+ LKS KEIWEF
Subjt:  MELGSNNLSSLASPVFDGENYQAWAIRIQAYMAGCDYWEAIEQDYEIAPLFENPTMYQIKTHEERVTRKVKARACLYAAVSPTIFNRIIVLKSTKEIWEF

Query:  LKSEYEGDERIKGMKVLNLVREFERMQMKDSESIKQYSD
        LKSEYEGDERIKGMKVLNLVREFERMQM D ESIK+YSD
Subjt:  LKSEYEGDERIKGMKVLNLVREFERMQMKDSESIKQYSD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTAGGATCAAACAATCTTTCTTCACTGGCTTCACCTGTGTTTGATGGTGAAAACTACCAAGCATGGGCAATCAGAATACAAGCCTACATGGCTGGTTGT
GATTATTGGGAAGCAATTGAGCAGGATTATGAAATTGCTCCACTTTTTGAAAATCCAACAATGTATCAGATCAAGACTCACGAGGAAAGGGTCACCAGAAAGGTA
AAGGCTCGAGCTTGCCTATATGCAGCTGTGTCTCCCACCATATTCAACAGAATTATCGTCTTGAAGTCAACAAAGGAAATCTGGGAATTCCTCAAAAGTGAGTAT
GAAGGCGATGAGAGGATTAAAGGCATGAAGGTGTTGAACTTGGTGAGGGAATTCGAGAGAATGCAGATGAAGGATTCTGAGTCCATCAAACAGTACTCAGACATT
GAGTGGTTTTGTAAAGATGTCGAGACTCAACAAGGAGCACATATTGCAGTACAGCAAGAAGAAGATCAACTCTTTGTGGCTACCTATTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTTAGGATCAAACAATCTTTCTTCACTGGCTTCACCTGTGTTTGATGGTGAAAACTACCAAGCATGGGCAATCAGAATACAAGCCTACATGGCTGGTTGT
GATTATTGGGAAGCAATTGAGCAGGATTATGAAATTGCTCCACTTTTTGAAAATCCAACAATGTATCAGATCAAGACTCACGAGGAAAGGGTCACCAGAAAGGTA
AAGGCTCGAGCTTGCCTATATGCAGCTGTGTCTCCCACCATATTCAACAGAATTATCGTCTTGAAGTCAACAAAGGAAATCTGGGAATTCCTCAAAAGTGAGTAT
GAAGGCGATGAGAGGATTAAAGGCATGAAGGTGTTGAACTTGGTGAGGGAATTCGAGAGAATGCAGATGAAGGATTCTGAGTCCATCAAACAGTACTCAGACATT
GAGTGGTTTTGTAAAGATGTCGAGACTCAACAAGGAGCACATATTGCAGTACAGCAAGAAGAAGATCAACTCTTTGTGGCTACCTATTTCTAA
Protein sequenceShow/hide protein sequence
MELGSNNLSSLASPVFDGENYQAWAIRIQAYMAGCDYWEAIEQDYEIAPLFENPTMYQIKTHEERVTRKVKARACLYAAVSPTIFNRIIVLKSTKEIWEFLKSEY
EGDERIKGMKVLNLVREFERMQMKDSESIKQYSDIEWFCKDVETQQGAHIAVQQEEDQLFVATYF