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Moc09g11740 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g11740
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr9:9992344..9999949
RNA-Seq ExpressionMoc09g11740
SyntenyMoc09g11740
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142775.1 protein NYNRIN-like [Momordica charantia]4.8e-2467.47Show/hide
Query:  RVEHYEPTTNEDELLLHLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIV
        R+++YE   NE+ELLL+LDLL+E+R +AQLRL EYQ R+ RHYN+ VRPR+FQVGHLVLR+VQ HV  L+P+WEG FE+KGIV
Subjt:  RVEHYEPTTNEDELLLHLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIV
XP_022156049.1 uncharacterized protein LOC111023017 [Momordica charantia]1.9e-2053Show/hide
Query:  RVEHYEPTTNEDELLLHLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIVRLGTYILADLKGDVLAH
        RVE+++  TN +  LL+LDLLEE+R+ +QL+LAEYQ RMAR+YN R R R F+ G L L++V  HV AL+P WEGP+ +  +VR   Y+L+DL G  L H
Subjt:  RVEHYEPTTNEDELLLHLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIVRLGTYILADLKGDVLAH
XP_022156070.1 uncharacterized protein K02A2.6-like [Momordica charantia]3.7e-3269Show/hide
Query:  RVEHYEPTTNEDELLLHLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIVRLGTYILADLKGDVLAH
        RVE+YE   NE+ELLL+LDL++E+R  AQLRLAEYQ +MARHYN+RVR R+FQ+G+LVLR+VQ HV  L+P+WEGPFE+KGIVR GTY+LADL+G +L+H
Subjt:  RVEHYEPTTNEDELLLHLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIVRLGTYILADLKGDVLAH
XP_022156986.1 uncharacterized protein LOC111023816 [Momordica charantia]5.9e-2255Show/hide
Query:  RVEHYEPTTNEDELLLHLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIVRLGTYILADLKGDVLAH
        RVE+++   N + LL++LDLLEE+R+ +QLRLAEYQ RMAR+YNARV+ R F+   LVL++V  HVGAL+P WEGP+ +  I+R   Y+L+DL G  L H
Subjt:  RVEHYEPTTNEDELLLHLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIVRLGTYILADLKGDVLAH
XP_022159003.1 uncharacterized protein LOC111025448 [Momordica charantia]5.9e-3067.33Show/hide
Query:  NRVEHYEPTTNEDELLLHLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIVRLGTYILADLKGDVLA
        +R+E YEP  NE ELLL+LDLLE +R  AQLRL E Q RMARHYN R++PR+FQVGHLV  ++Q+HVG LDP+WE  FE+KGIVR GTY+LADL+  VLA
Subjt:  NRVEHYEPTTNEDELLLHLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIVRLGTYILADLKGDVLA

Query:  H
        H
Subjt:  H
TrEMBL top hitse value%identityAlignment
A0A6J1CLW5 protein NYNRIN-like2.3e-2467.47Show/hide
Query:  RVEHYEPTTNEDELLLHLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIV
        R+++YE   NE+ELLL+LDLL+E+R +AQLRL EYQ R+ RHYN+ VRPR+FQVGHLVLR+VQ HV  L+P+WEG FE+KGIV
Subjt:  RVEHYEPTTNEDELLLHLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIV
A0A6J1DP99 uncharacterized protein K02A2.6-like1.8e-3269Show/hide
Query:  RVEHYEPTTNEDELLLHLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIVRLGTYILADLKGDVLAH
        RVE+YE   NE+ELLL+LDL++E+R  AQLRLAEYQ +MARHYN+RVR R+FQ+G+LVLR+VQ HV  L+P+WEGPFE+KGIVR GTY+LADL+G +L+H
Subjt:  RVEHYEPTTNEDELLLHLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIVRLGTYILADLKGDVLAH
A0A6J1DS38 uncharacterized protein LOC1110230179.2e-2153Show/hide
Query:  RVEHYEPTTNEDELLLHLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIVRLGTYILADLKGDVLAH
        RVE+++  TN +  LL+LDLLEE+R+ +QL+LAEYQ RMAR+YN R R R F+ G L L++V  HV AL+P WEGP+ +  +VR   Y+L+DL G  L H
Subjt:  RVEHYEPTTNEDELLLHLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIVRLGTYILADLKGDVLAH
A0A6J1DWM2 Ribonuclease H2.8e-2255Show/hide
Query:  RVEHYEPTTNEDELLLHLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIVRLGTYILADLKGDVLAH
        RVE+++   N + LL++LDLLEE+R+ +QLRLAEYQ RMAR+YNARV+ R F+   LVL++V  HVGAL+P WEGP+ +  I+R   Y+L+DL G  L H
Subjt:  RVEHYEPTTNEDELLLHLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIVRLGTYILADLKGDVLAH
A0A6J1DXL9 uncharacterized protein LOC1110254482.8e-3067.33Show/hide
Query:  NRVEHYEPTTNEDELLLHLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIVRLGTYILADLKGDVLA
        +R+E YEP  NE ELLL+LDLLE +R  AQLRL E Q RMARHYN R++PR+FQVGHLV  ++Q+HVG LDP+WE  FE+KGIVR GTY+LADL+  VLA
Subjt:  NRVEHYEPTTNEDELLLHLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIVRLGTYILADLKGDVLA

Query:  H
        H
Subjt:  H
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCATACTGTTCAGTTTAGGAGTCCTCTAGTGGCTGAAGTGCCAAGAGAAAAAGAGACGATACTGCTTAACGTCGAGCAACTTCTGGCCTGCTATGAGGTTAAGAA
AGTACCAAAGAAGGCTAATCGATTCTATATATGTGCTAGAAAAGGAGGGATAGAAACCATAATCAAGGGTTCATCCTCCATCAAGCGATTTGCCAGCATTATAAAGAGAA
TGCATACAGATGGGAGTAAATCCTTAATGGTCGGGTCCAACTCAACCGCCACAAATTCCAAGGCGAATAACGAAGTGATCGTTGACTCAATGACGATTTGTCATGTAGCT
ATCATTATTAAGGCCGAGTTTGATGGGCACGAATGTCTTATAGAGAAGGACCGGTACACTTCGATAATTGCACTTTATGCCGCAGCAGTCGTCGAAGGCGAAGGTCGAGC
TCGAGGAAACCGAAGCTGGCCTCGCCCAGTCTCAGTATTAAGTCAAAAATCAAAAGACCATACTGTAAAGAGCCTACGCCATGGTGAAGGGCTTCGAGGGTACATTGAAT
CTGCATACTATATTTGTCCATATAAAGCTCGTGATCTCAGCTTCGATATTGTGGTCAACGGCTCTACCTTGGCCCTAATTTGTGAAATAATCCACTGCGACCACAGCGTA
CTTGTTCAATCCTTTGCCCACACGGAATGGTTCAATGAGGTTAATCCCCGCTGTGCAAATGACCATGGACTTGTTATGGGAGTGAGTAGCTCGGGAGGTATTCTTTTATT
TGAGCAAGAAGCGTTTTGGTCTTACTCATGTACTTTTCCATGGGATATTCTTAGCCTAATACTTCTCAGTGATCTAGTTCACAATAGAGTAGAGCATTACGAGCCTACGA
CGAATGAGGATGAGCTGCTCCTCCACCTCGACTTGTTGGAAGAAAGAAGAGCAATGGCCCAGTTACGCCTGGCGGAATATCAGGGCAGAATGGCCAGACATTACAATGCC
CGCGTTCGACCTCGGGCCTTTCAGGTCGGACATCTGGTCTTAAGGAGGGTCCAAACGCATGTGGGTGCCCTTGATCCGGCCTGGGAGGGCCCGTTTGAGATCAAGGGCAT
AGTCCGACTTGGAACGTACATATTGGCCGATCTGAAAGGAGACGTCCTCGCACACCGTGGAACGCGGAGCACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGCATACTGTTCAGTTTAGGAGTCCTCTAGTGGCTGAAGTGCCAAGAGAAAAAGAGACGATACTGCTTAACGTCGAGCAACTTCTGGCCTGCTATGAGGTTAAGAA
AGTACCAAAGAAGGCTAATCGATTCTATATATGTGCTAGAAAAGGAGGGATAGAAACCATAATCAAGGGTTCATCCTCCATCAAGCGATTTGCCAGCATTATAAAGAGAA
TGCATACAGATGGGAGTAAATCCTTAATGGTCGGGTCCAACTCAACCGCCACAAATTCCAAGGCGAATAACGAAGTGATCGTTGACTCAATGACGATTTGTCATGTAGCT
ATCATTATTAAGGCCGAGTTTGATGGGCACGAATGTCTTATAGAGAAGGACCGGTACACTTCGATAATTGCACTTTATGCCGCAGCAGTCGTCGAAGGCGAAGGTCGAGC
TCGAGGAAACCGAAGCTGGCCTCGCCCAGTCTCAGTATTAAGTCAAAAATCAAAAGACCATACTGTAAAGAGCCTACGCCATGGTGAAGGGCTTCGAGGGTACATTGAAT
CTGCATACTATATTTGTCCATATAAAGCTCGTGATCTCAGCTTCGATATTGTGGTCAACGGCTCTACCTTGGCCCTAATTTGTGAAATAATCCACTGCGACCACAGCGTA
CTTGTTCAATCCTTTGCCCACACGGAATGGTTCAATGAGGTTAATCCCCGCTGTGCAAATGACCATGGACTTGTTATGGGAGTGAGTAGCTCGGGAGGTATTCTTTTATT
TGAGCAAGAAGCGTTTTGGTCTTACTCATGTACTTTTCCATGGGATATTCTTAGCCTAATACTTCTCAGTGATCTAGTTCACAATAGAGTAGAGCATTACGAGCCTACGA
CGAATGAGGATGAGCTGCTCCTCCACCTCGACTTGTTGGAAGAAAGAAGAGCAATGGCCCAGTTACGCCTGGCGGAATATCAGGGCAGAATGGCCAGACATTACAATGCC
CGCGTTCGACCTCGGGCCTTTCAGGTCGGACATCTGGTCTTAAGGAGGGTCCAAACGCATGTGGGTGCCCTTGATCCGGCCTGGGAGGGCCCGTTTGAGATCAAGGGCAT
AGTCCGACTTGGAACGTACATATTGGCCGATCTGAAAGGAGACGTCCTCGCACACCGTGGAACGCGGAGCACCTGA
Protein sequenceShow/hide protein sequence
MGHTVQFRSPLVAEVPREKETILLNVEQLLACYEVKKVPKKANRFYICARKGGIETIIKGSSSIKRFASIIKRMHTDGSKSLMVGSNSTATNSKANNEVIVDSMTICHVA
IIIKAEFDGHECLIEKDRYTSIIALYAAAVVEGEGRARGNRSWPRPVSVLSQKSKDHTVKSLRHGEGLRGYIESAYYICPYKARDLSFDIVVNGSTLALICEIIHCDHSV
LVQSFAHTEWFNEVNPRCANDHGLVMGVSSSGGILLFEQEAFWSYSCTFPWDILSLILLSDLVHNRVEHYEPTTNEDELLLHLDLLEERRAMAQLRLAEYQGRMARHYNA
RVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEIKGIVRLGTYILADLKGDVLAHRGTRST