; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc09g11780 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g11780
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr9:10022541..10024109
RNA-Seq ExpressionMoc09g11780
SyntenyMoc09g11780
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150863.1 uncharacterized protein LOC111018910 [Momordica charantia]4.9e-2429.91Show/hide
Query:  MNPPVQPN--APVRPNVRIKEIVDGVPIAINPDVAVHPLNAELLADDSDALDSGSISWTCYGGPASASE-------------------------ILYGSL
        MNPP  PN   P+ PNVRI+EIVDGVP+A N +V V  LN  LLA   D       + T Y      +E                           +   
Subjt:  MNPPVQPN--APVRPNVRIKEIVDGVPIAINPDVAVHPLNAELLADDSDALDSGSISWTCYGGPASASE-------------------------ILYGSL

Query:  DEARTWLESLPSESITSWDELAEKFFMKYFPPSKNAK---------------------------------------------------------------
        DEARTWL SLPSESITSWD+LAE F MKYFPPSKNAK                                                               
Subjt:  DEARTWLESLPSESITSWDELAEKFFMKYFPPSKNAK---------------------------------------------------------------

Query:  ---------------TPSNNNSLPDPRVVQGKSSKGLVESESYTALNSKIENLIDLVMRSTTQQSSVGASAGKANVN-----------------------
                         SN +S  D R +QG+ +K L ES+SY+  NSKIEN+IDLV RS TQQS+VGA  GKAN +                       
Subjt:  ---------------TPSNNNSLPDPRVVQGKSSKGLVESESYTALNSKIENLIDLVMRSTTQQSSVGASAGKANVN-----------------------

Query:  -QILIVETIRIQTRTILAGGITP---ILVRVAIKEDTMLEHLMLQHFSRRLVSYGFEEQTGGSIVQRYRSAKRDGKEQYKALTLRNGKALPPVHQNASAS
          +  +           +    P         I+E+ ML H MLQH SR+ V Y   +     IV++ R  +    E+           + PV++ AS +
Subjt:  -QILIVETIRIQTRTILAGGITP---ILVRVAIKEDTMLEHLMLQHFSRRLVSYGFEEQTGGSIVQRYRSAKRDGKEQYKALTLRNGKALPPVHQNASAS

Query:  IKEPTQVYQGETQSEQDSELTKVVVPTP
             +V +   Q+E +  L +  +  P
Subjt:  IKEPTQVYQGETQSEQDSELTKVVVPTP

XP_022157438.1 uncharacterized protein LOC111024136 [Momordica charantia]1.1e-3646.62Show/hide
Query:  DEARTWLESLPSESITSWDELAEKFFMKYFPPSKNAK---------------------------TPSNNNSLPDPRVVQGKSSKGLVESESYTALNSKIE
        DEARTWLESLPSESITSWD+LAEKF MKYFPP+KNAK                             SNN+S  DP+ VQGKSSK LVESESYT LNSKIE
Subjt:  DEARTWLESLPSESITSWDELAEKFFMKYFPPSKNAK---------------------------TPSNNNSLPDPRVVQGKSSKGLVESESYTALNSKIE

Query:  NLIDLVMRSTTQQSSVGASAGKANVNQILIV------------------ETIRIQTRTILAGGITPILVRVAIKEDTM--LEHLMLQHFS------RRLV
        NL DLVMRS TQQS  GAS G  NVNQI  +                  E+   Q          P   +    E +   LE LM Q+ +       R V
Subjt:  NLIDLVMRSTTQQSSVGASAGKANVNQILIV------------------ETIRIQTRTILAGGITPILVRVAIKEDTM--LEHLMLQHFS------RRLV

Query:  S--YGFEEQTG-----------GSIVQRYRSAKRDGKEQYKALTLRNGKALPPVHQNASASIKEPT
        S     E Q G           G++       KRDGKEQ KALTL +GKALPPVH NA A  KE T
Subjt:  S--YGFEEQTG-----------GSIVQRYRSAKRDGKEQYKALTLRNGKALPPVHQNASASIKEPT

XP_022158598.1 uncharacterized protein LOC111025053 [Momordica charantia]1.5e-2836.51Show/hide
Query:  YGSLDEARTWLESLPSESITSWDELAEKFFMKYFPPSKN---------------------------------------------------AKTPSNNNSL
        Y    EARTWLESL SE ITSWD+L EKF MKYF PSK                                                     +  S+N+S 
Subjt:  YGSLDEARTWLESLPSESITSWDELAEKFFMKYFPPSKN---------------------------------------------------AKTPSNNNSL

Query:  PDPRVVQGKSSKGLVESESYTALNSKIENLIDLVMRSTTQQSSVGAS---------AGKANVNQILIVETIRIQTRTILAGGITPILVRVAIKED----T
         D R ++GKSSK LVESESYT LNSKIE L DL  R+T+  ++             +G    +   I      Q +     G       V   +     T
Subjt:  PDPRVVQGKSSKGLVESESYTALNSKIENLIDLVMRSTTQQSSVGAS---------AGKANVNQILIVETIRIQTRTILAGGITPILVRVAIKED----T

Query:  MLEHLMLQHF--------SRRLVSYGFEEQTG-----------GSIVQRYRSAKRDGKEQYKALTLRNGKALPPVHQNASASIKEPTQVYQGETQSEQDS
         LE++M Q+         S+       E Q G           G++       KRD KEQ  ALTLR+GKALPP H NA    KEP Q+ QGE QSEQDS
Subjt:  MLEHLMLQHF--------SRRLVSYGFEEQTG-----------GSIVQRYRSAKRDGKEQYKALTLRNGKALPPVHQNASASIKEPTQVYQGETQSEQDS

Query:  ELTKVVVPTPLEQIA
        E  +VVVP P EQIA
Subjt:  ELTKVVVPTPLEQIA

XP_022158611.1 uncharacterized protein LOC111025065 [Momordica charantia]1.9e-2855.63Show/hide
Query:  YGSLDEARTWLESLPSESITSWDELAEKFFMKYFPPSKNAKTPSNNNS----------------------------------------------LPDPRV
        Y   DEARTWLESLP ESITSWD+LAEKF MKYFPPSKNAK  S  N+                                              LPDPR 
Subjt:  YGSLDEARTWLESLPSESITSWDELAEKFFMKYFPPSKNAKTPSNNNS----------------------------------------------LPDPRV

Query:  VQGKSSKGLVESESYTALNSKIENLIDLVMRSTTQQSSVGASAGKANVNQI
        VQGKSSKGLVESESYT LNS IENL  LVMRS  QQSSVGA  G ANVNQI
Subjt:  VQGKSSKGLVESESYTALNSKIENLIDLVMRSTTQQSSVGASAGKANVNQI

XP_022159060.1 uncharacterized protein LOC111025500 [Momordica charantia]1.3e-2141.75Show/hide
Query:  SNNNSLPDPRVVQGKSSKGLVESESYTALNSKIENLIDLVMRSTTQQSSVGASAGKANVNQILIV------------------------------ETIRI
        SNN S  DPR + GK SKG  ESES+TALN KIENL DLVMRS T QS+VGASAGKANV+ I  +                              E    
Subjt:  SNNNSLPDPRVVQGKSSKGLVESESYTALNSKIENLIDLVMRSTTQQSSVGASAGKANVNQILIV------------------------------ETIRI

Query:  QTRTILAGGITPILVRVAIKEDTMLEHLMLQHF---SRRLVSYGFEEQTG-----------GSIVQRYRSAKRDGKEQYKALTLRNGKALPPVHQNASAS
          RT  AGG    LVRV I+++TML+++        S+ +     E Q G           G +    +  KRDGKEQ  ALTLR+GK LP  H NA   
Subjt:  QTRTILAGGITPILVRVAIKEDTMLEHLMLQHF---SRRLVSYGFEEQTG-----------GSIVQRYRSAKRDGKEQYKALTLRNGKALPPVHQNASAS

Query:  IKEPTQ
         KE  Q
Subjt:  IKEPTQ

TrEMBL top hitse value%identityAlignment
A0A6J1DAK9 uncharacterized protein LOC1110189102.4e-2429.91Show/hide
Query:  MNPPVQPN--APVRPNVRIKEIVDGVPIAINPDVAVHPLNAELLADDSDALDSGSISWTCYGGPASASE-------------------------ILYGSL
        MNPP  PN   P+ PNVRI+EIVDGVP+A N +V V  LN  LLA   D       + T Y      +E                           +   
Subjt:  MNPPVQPN--APVRPNVRIKEIVDGVPIAINPDVAVHPLNAELLADDSDALDSGSISWTCYGGPASASE-------------------------ILYGSL

Query:  DEARTWLESLPSESITSWDELAEKFFMKYFPPSKNAK---------------------------------------------------------------
        DEARTWL SLPSESITSWD+LAE F MKYFPPSKNAK                                                               
Subjt:  DEARTWLESLPSESITSWDELAEKFFMKYFPPSKNAK---------------------------------------------------------------

Query:  ---------------TPSNNNSLPDPRVVQGKSSKGLVESESYTALNSKIENLIDLVMRSTTQQSSVGASAGKANVN-----------------------
                         SN +S  D R +QG+ +K L ES+SY+  NSKIEN+IDLV RS TQQS+VGA  GKAN +                       
Subjt:  ---------------TPSNNNSLPDPRVVQGKSSKGLVESESYTALNSKIENLIDLVMRSTTQQSSVGASAGKANVN-----------------------

Query:  -QILIVETIRIQTRTILAGGITP---ILVRVAIKEDTMLEHLMLQHFSRRLVSYGFEEQTGGSIVQRYRSAKRDGKEQYKALTLRNGKALPPVHQNASAS
          +  +           +    P         I+E+ ML H MLQH SR+ V Y   +     IV++ R  +    E+           + PV++ AS +
Subjt:  -QILIVETIRIQTRTILAGGITP---ILVRVAIKEDTMLEHLMLQHFSRRLVSYGFEEQTGGSIVQRYRSAKRDGKEQYKALTLRNGKALPPVHQNASAS

Query:  IKEPTQVYQGETQSEQDSELTKVVVPTP
             +V +   Q+E +  L +  +  P
Subjt:  IKEPTQVYQGETQSEQDSELTKVVVPTP

A0A6J1DTD1 uncharacterized protein LOC1110241365.4e-3746.62Show/hide
Query:  DEARTWLESLPSESITSWDELAEKFFMKYFPPSKNAK---------------------------TPSNNNSLPDPRVVQGKSSKGLVESESYTALNSKIE
        DEARTWLESLPSESITSWD+LAEKF MKYFPP+KNAK                             SNN+S  DP+ VQGKSSK LVESESYT LNSKIE
Subjt:  DEARTWLESLPSESITSWDELAEKFFMKYFPPSKNAK---------------------------TPSNNNSLPDPRVVQGKSSKGLVESESYTALNSKIE

Query:  NLIDLVMRSTTQQSSVGASAGKANVNQILIV------------------ETIRIQTRTILAGGITPILVRVAIKEDTM--LEHLMLQHFS------RRLV
        NL DLVMRS TQQS  GAS G  NVNQI  +                  E+   Q          P   +    E +   LE LM Q+ +       R V
Subjt:  NLIDLVMRSTTQQSSVGASAGKANVNQILIV------------------ETIRIQTRTILAGGITPILVRVAIKEDTM--LEHLMLQHFS------RRLV

Query:  S--YGFEEQTG-----------GSIVQRYRSAKRDGKEQYKALTLRNGKALPPVHQNASASIKEPT
        S     E Q G           G++       KRDGKEQ KALTL +GKALPPVH NA A  KE T
Subjt:  S--YGFEEQTG-----------GSIVQRYRSAKRDGKEQYKALTLRNGKALPPVHQNASASIKEPT

A0A6J1DWK1 uncharacterized protein LOC1110250537.1e-2936.51Show/hide
Query:  YGSLDEARTWLESLPSESITSWDELAEKFFMKYFPPSKN---------------------------------------------------AKTPSNNNSL
        Y    EARTWLESL SE ITSWD+L EKF MKYF PSK                                                     +  S+N+S 
Subjt:  YGSLDEARTWLESLPSESITSWDELAEKFFMKYFPPSKN---------------------------------------------------AKTPSNNNSL

Query:  PDPRVVQGKSSKGLVESESYTALNSKIENLIDLVMRSTTQQSSVGAS---------AGKANVNQILIVETIRIQTRTILAGGITPILVRVAIKED----T
         D R ++GKSSK LVESESYT LNSKIE L DL  R+T+  ++             +G    +   I      Q +     G       V   +     T
Subjt:  PDPRVVQGKSSKGLVESESYTALNSKIENLIDLVMRSTTQQSSVGAS---------AGKANVNQILIVETIRIQTRTILAGGITPILVRVAIKED----T

Query:  MLEHLMLQHF--------SRRLVSYGFEEQTG-----------GSIVQRYRSAKRDGKEQYKALTLRNGKALPPVHQNASASIKEPTQVYQGETQSEQDS
         LE++M Q+         S+       E Q G           G++       KRD KEQ  ALTLR+GKALPP H NA    KEP Q+ QGE QSEQDS
Subjt:  MLEHLMLQHF--------SRRLVSYGFEEQTG-----------GSIVQRYRSAKRDGKEQYKALTLRNGKALPPVHQNASASIKEPTQVYQGETQSEQDS

Query:  ELTKVVVPTPLEQIA
        E  +VVVP P EQIA
Subjt:  ELTKVVVPTPLEQIA

A0A6J1DXK5 uncharacterized protein LOC1110255006.4e-2241.75Show/hide
Query:  SNNNSLPDPRVVQGKSSKGLVESESYTALNSKIENLIDLVMRSTTQQSSVGASAGKANVNQILIV------------------------------ETIRI
        SNN S  DPR + GK SKG  ESES+TALN KIENL DLVMRS T QS+VGASAGKANV+ I  +                              E    
Subjt:  SNNNSLPDPRVVQGKSSKGLVESESYTALNSKIENLIDLVMRSTTQQSSVGASAGKANVNQILIV------------------------------ETIRI

Query:  QTRTILAGGITPILVRVAIKEDTMLEHLMLQHF---SRRLVSYGFEEQTG-----------GSIVQRYRSAKRDGKEQYKALTLRNGKALPPVHQNASAS
          RT  AGG    LVRV I+++TML+++        S+ +     E Q G           G +    +  KRDGKEQ  ALTLR+GK LP  H NA   
Subjt:  QTRTILAGGITPILVRVAIKEDTMLEHLMLQHF---SRRLVSYGFEEQTG-----------GSIVQRYRSAKRDGKEQYKALTLRNGKALPPVHQNASAS

Query:  IKEPTQ
         KE  Q
Subjt:  IKEPTQ

A0A6J1E1F3 uncharacterized protein LOC1110250659.3e-2955.63Show/hide
Query:  YGSLDEARTWLESLPSESITSWDELAEKFFMKYFPPSKNAKTPSNNNS----------------------------------------------LPDPRV
        Y   DEARTWLESLP ESITSWD+LAEKF MKYFPPSKNAK  S  N+                                              LPDPR 
Subjt:  YGSLDEARTWLESLPSESITSWDELAEKFFMKYFPPSKNAKTPSNNNS----------------------------------------------LPDPRV

Query:  VQGKSSKGLVESESYTALNSKIENLIDLVMRSTTQQSSVGASAGKANVNQI
        VQGKSSKGLVESESYT LNS IENL  LVMRS  QQSSVGA  G ANVNQI
Subjt:  VQGKSSKGLVESESYTALNSKIENLIDLVMRSTTQQSSVGASAGKANVNQI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGAATGAATCCGCCAGTTCAGCCCAATGCGCCTGTACGACCAAATGTGAGGATAAAGGAAATAGTAGATGGGGTTCCTATCGCTATTAACCCTGATGTAGCAGT
GCACCCTCTCAACGCGGAACTCTTAGCAGACGACTCAGATGCTCTAGACAGTGGGTCAATTTCATGGACATGCTACGGAGGACCTGCATCAGCATCTGAAATTCTTTATG
GGAGTTTAGATGAAGCCAGAACATGGTTGGAGTCCCTTCCTTCAGAGTCTATTACAAGTTGGGATGAATTGGCTGAGAAATTTTTTATGAAATACTTCCCACCCAGCAAA
AATGCTAAAACACCATCAAACAATAACTCATTGCCTGATCCTAGAGTTGTTCAAGGAAAATCAAGTAAAGGACTAGTTGAGTCTGAATCATATACTGCATTGAATTCAAA
GATTGAGAATCTGATAGACTTGGTAATGAGGAGTACAACGCAGCAAAGTTCAGTTGGAGCATCAGCTGGTAAGGCTAATGTTAATCAAATCTTAATAGTAGAAACAATTC
GTATTCAAACACGTACAATCCTGGCTGGAGGAATCACCCCAATTTTAGTTAGAGTGGCAATCAAGGAGGACACAATGCTGGAACATCTAATGCTCCAACATTTCAGCAGA
AGGCTAGTTAGCTACGGATTTGAAGAGCAGACCGGTGGGAGCATTGTCCAACGATACAGAAGTGCAAAGAGAGACGGTAAGGAACAATACAAGGCCCTCACTCTGCGAAA
TGGGAAAGCATTACCTCCGGTACACCAAAATGCTTCAGCATCGATTAAGGAACCCACTCAAGTTTACCAAGGAGAAACTCAGTCAGAACAGGACAGTGAGCTAACAAAAG
TAGTTGTACCTACTCCATTAGAGCAGATAGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATAGAATGAATCCGCCAGTTCAGCCCAATGCGCCTGTACGACCAAATGTGAGGATAAAGGAAATAGTAGATGGGGTTCCTATCGCTATTAACCCTGATGTAGCAGT
GCACCCTCTCAACGCGGAACTCTTAGCAGACGACTCAGATGCTCTAGACAGTGGGTCAATTTCATGGACATGCTACGGAGGACCTGCATCAGCATCTGAAATTCTTTATG
GGAGTTTAGATGAAGCCAGAACATGGTTGGAGTCCCTTCCTTCAGAGTCTATTACAAGTTGGGATGAATTGGCTGAGAAATTTTTTATGAAATACTTCCCACCCAGCAAA
AATGCTAAAACACCATCAAACAATAACTCATTGCCTGATCCTAGAGTTGTTCAAGGAAAATCAAGTAAAGGACTAGTTGAGTCTGAATCATATACTGCATTGAATTCAAA
GATTGAGAATCTGATAGACTTGGTAATGAGGAGTACAACGCAGCAAAGTTCAGTTGGAGCATCAGCTGGTAAGGCTAATGTTAATCAAATCTTAATAGTAGAAACAATTC
GTATTCAAACACGTACAATCCTGGCTGGAGGAATCACCCCAATTTTAGTTAGAGTGGCAATCAAGGAGGACACAATGCTGGAACATCTAATGCTCCAACATTTCAGCAGA
AGGCTAGTTAGCTACGGATTTGAAGAGCAGACCGGTGGGAGCATTGTCCAACGATACAGAAGTGCAAAGAGAGACGGTAAGGAACAATACAAGGCCCTCACTCTGCGAAA
TGGGAAAGCATTACCTCCGGTACACCAAAATGCTTCAGCATCGATTAAGGAACCCACTCAAGTTTACCAAGGAGAAACTCAGTCAGAACAGGACAGTGAGCTAACAAAAG
TAGTTGTACCTACTCCATTAGAGCAGATAGCTTAA
Protein sequenceShow/hide protein sequence
MDRMNPPVQPNAPVRPNVRIKEIVDGVPIAINPDVAVHPLNAELLADDSDALDSGSISWTCYGGPASASEILYGSLDEARTWLESLPSESITSWDELAEKFFMKYFPPSK
NAKTPSNNNSLPDPRVVQGKSSKGLVESESYTALNSKIENLIDLVMRSTTQQSSVGASAGKANVNQILIVETIRIQTRTILAGGITPILVRVAIKEDTMLEHLMLQHFSR
RLVSYGFEEQTGGSIVQRYRSAKRDGKEQYKALTLRNGKALPPVHQNASASIKEPTQVYQGETQSEQDSELTKVVVPTPLEQIA