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Moc09g12090 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g12090
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111024115
Genome locationchr9:10286406..10289887
RNA-Seq ExpressionMoc09g12090
SyntenyMoc09g12090
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022157414.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024115 [Momordica charantia]5.4e-2874.16Show/hide
Query:  DNTIPDARRREALEGTMERLIRGMEALTERIGRLEAQNQAPERIPPP---RVLDEDDYEGDGSDHWEDDQVTILAAPRRGERHVGRGLD
        +  I DARRREALEGT+ER+IR MEALTERIGRLE QNQA  R+PPP   RV+DED+YEGDGSDHWEDDQ T+LA PR G+ HVG GLD
Subjt:  DNTIPDARRREALEGTMERLIRGMEALTERIGRLEAQNQAPERIPPP---RVLDEDDYEGDGSDHWEDDQVTILAAPRRGERHVGRGLD

XP_022971169.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111469948, partial [Cucurbita maxima]2.2e-1362.65Show/hide
Query:  MSNPEDNT-IPDARRREALEGTMERLIRGMEALTERIGRLEAQNQAPERIPPPRVLDEDDYEGDGSDHWEDD-QVTILAAPRR
        M NP++NT I DAR REA + TMERLIRG+E LT+RIGRLE QNQA +RIP P     D YEGD SDH ED+ QV  L + RR
Subjt:  MSNPEDNT-IPDARRREALEGTMERLIRGMEALTERIGRLEAQNQAPERIPPPRVLDEDDYEGDGSDHWEDD-QVTILAAPRR

XP_023520282.1 uncharacterized protein LOC111783592 [Cucurbita pepo subsp. pepo]7.6e-1459.3Show/hide
Query:  MSNPEDNT-IPDARRREALEGTMERLIRGMEALTERIGRLEAQNQAPERIPPPRVLDEDDYEGDGSDHWEDDQVTILAAPRRGERH
        M NP+DNT I DAR REA + TMERLIRG+E LT+RIGRLE QNQA +RIP P     D YEGD SDH ED+   +     RG  H
Subjt:  MSNPEDNT-IPDARRREALEGTMERLIRGMEALTERIGRLEAQNQAPERIPPPRVLDEDDYEGDGSDHWEDDQVTILAAPRRGERH

XP_023520835.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111784339 [Cucurbita pepo subsp. pepo]7.6e-1459.3Show/hide
Query:  MSNPEDNT-IPDARRREALEGTMERLIRGMEALTERIGRLEAQNQAPERIPPPRVLDEDDYEGDGSDHWEDDQVTILAAPRRGERH
        M NP+DNT I DAR REA + TMERLIRG+E LT+RIGRLE QNQA +RIP P     D YEGD SDH ED+   +     RG  H
Subjt:  MSNPEDNT-IPDARRREALEGTMERLIRGMEALTERIGRLEAQNQAPERIPPPRVLDEDDYEGDGSDHWEDDQVTILAAPRRGERH

XP_023553652.1 uncharacterized protein LOC111811140 [Cucurbita pepo subsp. pepo]3.8e-1358.14Show/hide
Query:  MSNPEDNT-IPDARRREALEGTMERLIRGMEALTERIGRLEAQNQAPERIPPPRVLDEDDYEGDGSDHWEDDQVTILAAPRRGERH
        M NP+DNT I DAR REA + TM+RLIRG+E LT+RIGRLE QNQA +RIP P     D YEGD SDH ED+   +     RG  H
Subjt:  MSNPEDNT-IPDARRREALEGTMERLIRGMEALTERIGRLEAQNQAPERIPPPRVLDEDDYEGDGSDHWEDDQVTILAAPRRGERH

TrEMBL top hitse value%identityAlignment
A0A6J1CP40 uncharacterized protein LOC1110128063.2e-1038.85Show/hide
Query:  MCYFLTYLTDDTLTVKLGEEAPATFTEVLQKAKNGFEPRQVEQRRCPTRRNQIIKKRRNQ-----IPSPKTKGQ-------------------------L
        MCYFLT L D+TLTVKLGEEAPATF EVLQKAK   + +++ + +      QI +K+ NQ         K KG                           
Subjt:  MCYFLTYLTDDTLTVKLGEEAPATFTEVLQKAKNGFEPRQVEQRRCPTRRNQIIKKRRNQ-----IPSPKTKGQ-------------------------L

Query:  PSTPKVDQIIGVPIQASVE-LVKRPRKLQRDPDKRNRDR
        P+T  + +I+    +  +E L+KRP+KLQ DP+KRN+D+
Subjt:  PSTPKVDQIIGVPIQASVE-LVKRPRKLQRDPDKRNRDR

A0A6J1DD31 uncharacterized protein LOC1110192566.5e-1137.84Show/hide
Query:  MCYFLTYLTDDTLTVKLGEEAPATFTEVLQKAKNGFEPRQVEQRRCPTRRNQIIKKRRNQIP-----SPKTKGQ-------------------------L
        MCYFLT L D+TLTVKLGEEAPATF EVLQKAK   + +++ + +      QI +K+ NQ         K KGQ                          
Subjt:  MCYFLTYLTDDTLTVKLGEEAPATFTEVLQKAKNGFEPRQVEQRRCPTRRNQIIKKRRNQIP-----SPKTKGQ-------------------------L

Query:  PSTPKVDQIIGVPIQASVE-LVKRPRKLQRDPDKRNRDRVFGIEFYGS
        P+T  + +I+    +  +E L+KRP KL+ DP+KRN+D+   I    S
Subjt:  PSTPKVDQIIGVPIQASVE-LVKRPRKLQRDPDKRNRDRVFGIEFYGS

A0A6J1DWE9 LOW QUALITY PROTEIN: uncharacterized protein LOC1110241152.6e-2874.16Show/hide
Query:  DNTIPDARRREALEGTMERLIRGMEALTERIGRLEAQNQAPERIPPP---RVLDEDDYEGDGSDHWEDDQVTILAAPRRGERHVGRGLD
        +  I DARRREALEGT+ER+IR MEALTERIGRLE QNQA  R+PPP   RV+DED+YEGDGSDHWEDDQ T+LA PR G+ HVG GLD
Subjt:  DNTIPDARRREALEGTMERLIRGMEALTERIGRLEAQNQAPERIPPP---RVLDEDDYEGDGSDHWEDDQVTILAAPRRGERHVGRGLD

A0A6J1DXW4 uncharacterized protein LOC1110255853.2e-1044.14Show/hide
Query:  MCYFLTYLTDDTLTVKLGEEAPATFTEVLQKAKNGFEPR--QVEQRRCPTRRNQIIKKRRNQIPSPKTKGQLPSTPKVDQII-GVPIQASVELVKRPRKL
        MCYFLT L D+TLTVKLGEEAP+TF EVLQKAK   + R      RR P                   +G  P+T  + +I+  +      +L+KRP KL
Subjt:  MCYFLTYLTDDTLTVKLGEEAPATFTEVLQKAKNGFEPR--QVEQRRCPTRRNQIIKKRRNQIPSPKTKGQLPSTPKVDQII-GVPIQASVELVKRPRKL

Query:  QRDPDKRNRDR
        + DP+KRN+DR
Subjt:  QRDPDKRNRDR

A0A6J1I7T3 LOW QUALITY PROTEIN: uncharacterized protein LOC1114699481.1e-1362.65Show/hide
Query:  MSNPEDNT-IPDARRREALEGTMERLIRGMEALTERIGRLEAQNQAPERIPPPRVLDEDDYEGDGSDHWEDD-QVTILAAPRR
        M NP++NT I DAR REA + TMERLIRG+E LT+RIGRLE QNQA +RIP P     D YEGD SDH ED+ QV  L + RR
Subjt:  MSNPEDNT-IPDARRREALEGTMERLIRGMEALTERIGRLEAQNQAPERIPPPRVLDEDDYEGDGSDHWEDD-QVTILAAPRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCTACTTTCTCACCTACTTGACTGATGACACTTTGACGGTCAAGTTGGGAGAAGAAGCACCAGCTACCTTTACTGAGGTCTTGCAGAAGGCCAAGAATGGCTTCGA
ACCAAGACAAGTCGAACAAAGAAGATGTCCAACCAGAAGAAATCAAATCATCAAGAAAAGGAGAAATCAGATTCCAAGTCCAAAGACAAAGGGTCAGCTTCCCAGTACTC
CCAAGGTGGATCAGATCATAGGGGTTCCGATTCAGGCTTCAGTTGAGCTCGTCAAACGCCCTAGGAAACTTCAAAGAGATCCTGACAAGCGAAACAGAGATAGGGTTTTT
GGGATTGAGTTCTATGGGTCTTGTTCGTTAGCAAGGTTCTTAGATCCAACTCTCAAGGGTTTCTTATCATTTGGTATCAGAGCACTAGGCTCTAGATCGGATATATGTTT
CCGTTTTCGTATTGCTTTTCTTGTTCTTTGTTTTGGAATTTTTGTTCTTATTGTTCATCTCATCTCTGTCTTATCTACAACTTTGTCTTCTTCCATATCTTCTGATTCAA
TTTGCTTCTGGATGAAAAGTTTGAAAATTGATATTCTGTTCTGGAAAACTGCTATACCCGAGAGCATCATGTCCAATCCTGAAGATAATACCATTCCCGATGCCCGAAGG
AGAGAGGCACTAGAAGGAACTATGGAACGATTGATTCGTGGCATGGAGGCTTTGACAGAGCGGATAGGAAGGTTGGAGGCTCAAAACCAAGCTCCAGAGAGAATTCCACC
ACCACGTGTTCTAGATGAGGATGATTATGAAGGTGATGGATCTGATCATTGGGAGGACGATCAAGTTACAATCTTGGCGGCTCCAAGACGGGGAGAGAGACATGTTGGTC
GTGGCTTAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGCTACTTTCTCACCTACTTGACTGATGACACTTTGACGGTCAAGTTGGGAGAAGAAGCACCAGCTACCTTTACTGAGGTCTTGCAGAAGGCCAAGAATGGCTTCGA
ACCAAGACAAGTCGAACAAAGAAGATGTCCAACCAGAAGAAATCAAATCATCAAGAAAAGGAGAAATCAGATTCCAAGTCCAAAGACAAAGGGTCAGCTTCCCAGTACTC
CCAAGGTGGATCAGATCATAGGGGTTCCGATTCAGGCTTCAGTTGAGCTCGTCAAACGCCCTAGGAAACTTCAAAGAGATCCTGACAAGCGAAACAGAGATAGGGTTTTT
GGGATTGAGTTCTATGGGTCTTGTTCGTTAGCAAGGTTCTTAGATCCAACTCTCAAGGGTTTCTTATCATTTGGTATCAGAGCACTAGGCTCTAGATCGGATATATGTTT
CCGTTTTCGTATTGCTTTTCTTGTTCTTTGTTTTGGAATTTTTGTTCTTATTGTTCATCTCATCTCTGTCTTATCTACAACTTTGTCTTCTTCCATATCTTCTGATTCAA
TTTGCTTCTGGATGAAAAGTTTGAAAATTGATATTCTGTTCTGGAAAACTGCTATACCCGAGAGCATCATGTCCAATCCTGAAGATAATACCATTCCCGATGCCCGAAGG
AGAGAGGCACTAGAAGGAACTATGGAACGATTGATTCGTGGCATGGAGGCTTTGACAGAGCGGATAGGAAGGTTGGAGGCTCAAAACCAAGCTCCAGAGAGAATTCCACC
ACCACGTGTTCTAGATGAGGATGATTATGAAGGTGATGGATCTGATCATTGGGAGGACGATCAAGTTACAATCTTGGCGGCTCCAAGACGGGGAGAGAGACATGTTGGTC
GTGGCTTAGATTGA
Protein sequenceShow/hide protein sequence
MCYFLTYLTDDTLTVKLGEEAPATFTEVLQKAKNGFEPRQVEQRRCPTRRNQIIKKRRNQIPSPKTKGQLPSTPKVDQIIGVPIQASVELVKRPRKLQRDPDKRNRDRVF
GIEFYGSCSLARFLDPTLKGFLSFGIRALGSRSDICFRFRIAFLVLCFGIFVLIVHLISVLSTTLSSSISSDSICFWMKSLKIDILFWKTAIPESIMSNPEDNTIPDARR
REALEGTMERLIRGMEALTERIGRLEAQNQAPERIPPPRVLDEDDYEGDGSDHWEDDQVTILAAPRRGERHVGRGLD